EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000009112 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: C->U-editing enzyme APOBEC-1-like
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 3689 bases
Position: chrscaffold_362209:1145-4833
Accession: 103127957
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000008288	APOBEC_N	PF08210.11	6.2e-29	1	1
ENSEEUP00000008288	APOBEC_C	PF05240.14	1.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000009096	-	675	XM_007538836	ENSEEUP00000008288	225 (aa)	XP_007538898	UPI0000F62836

Gene Model

Click here to download ENSEEUG00000009112's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000009112's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000009112	-	93	76.667	ENSEEUG00000007530	-	100	76.667
ENSEEUG00000009112	-	56	34.375	ENSEEUG00000013899	AICDA	66	34.375

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000009112	-	98	65.158	ENSG00000111701	APOBEC1	93	65.158	Homo_sapiens
ENSEEUG00000009112	-	96	66.820	ENSAMEG00000007098	APOBEC1	91	66.820	Ailuropoda_melanoleuca
ENSEEUG00000009112	-	76	41.520	ENSACAG00000028578	-	93	41.520	Anolis_carolinensis
ENSEEUG00000009112	-	98	66.516	ENSANAG00000027743	APOBEC1	89	66.516	Aotus_nancymaae
ENSEEUG00000009112	-	98	60.909	ENSBTAG00000014683	APOBEC1	93	60.909	Bos_taurus
ENSEEUG00000009112	-	98	65.000	ENSCJAG00000005398	APOBEC1	99	65.000	Callithrix_jacchus
ENSEEUG00000009112	-	98	66.063	ENSCAFG00000013901	APOBEC1	93	66.063	Canis_familiaris
ENSEEUG00000009112	-	98	65.909	ENSCAFG00020003511	APOBEC1	92	65.909	Canis_lupus_dingo
ENSEEUG00000009112	-	98	62.273	ENSCHIG00000011898	APOBEC1	94	59.361	Capra_hircus
ENSEEUG00000009112	-	59	68.421	ENSTSYG00000029141	APOBEC1	94	68.421	Carlito_syrichta
ENSEEUG00000009112	-	91	60.294	ENSCAPG00000015882	-	95	60.294	Cavia_aperea
ENSEEUG00000009112	-	91	60.488	ENSCPOG00000033068	APOBEC1	87	60.488	Cavia_porcellus
ENSEEUG00000009112	-	98	64.706	ENSCCAG00000022258	APOBEC1	93	64.706	Cebus_capucinus
ENSEEUG00000009112	-	98	65.611	ENSCATG00000021613	APOBEC1	89	65.611	Cercocebus_atys
ENSEEUG00000009112	-	91	62.439	ENSCLAG00000014645	APOBEC1	89	62.439	Chinchilla_lanigera
ENSEEUG00000009112	-	84	65.957	ENSCSAG00000009817	APOBEC1	98	65.957	Chlorocebus_sabaeus
ENSEEUG00000009112	-	84	43.229	ENSCPBG00000014327	-	80	38.350	Chrysemys_picta_bellii
ENSEEUG00000009112	-	87	46.429	ENSCPBG00000014329	-	54	46.429	Chrysemys_picta_bellii
ENSEEUG00000009112	-	84	43.750	ENSCPBG00000014328	-	84	43.750	Chrysemys_picta_bellii
ENSEEUG00000009112	-	74	44.379	ENSCPBG00000017398	-	74	44.379	Chrysemys_picta_bellii
ENSEEUG00000009112	-	76	48.276	ENSCPBG00000014335	-	70	48.276	Chrysemys_picta_bellii
ENSEEUG00000009112	-	74	47.929	ENSCPBG00000014331	-	70	48.428	Chrysemys_picta_bellii
ENSEEUG00000009112	-	98	66.063	ENSCANG00000038359	APOBEC1	96	66.063	Colobus_angolensis_palliatus
ENSEEUG00000009112	-	96	60.185	ENSCGRG00001011130	Apobec1	94	60.185	Cricetulus_griseus_chok1gshd
ENSEEUG00000009112	-	96	60.185	ENSCGRG00000008644	Apobec1	94	60.185	Cricetulus_griseus_crigri
ENSEEUG00000009112	-	98	63.348	ENSDNOG00000010926	APOBEC1	93	63.348	Dasypus_novemcinctus
ENSEEUG00000009112	-	90	57.353	ENSDORG00000023717	Apobec1	100	56.279	Dipodomys_ordii
ENSEEUG00000009112	-	98	63.964	ENSETEG00000004867	APOBEC1	94	63.964	Echinops_telfairi
ENSEEUG00000009112	-	96	66.204	ENSEASG00005015951	APOBEC1	90	66.204	Equus_asinus_asinus
ENSEEUG00000009112	-	82	65.761	ENSECAG00000017163	APOBEC1	96	65.761	Equus_caballus
ENSEEUG00000009112	-	96	68.519	ENSFCAG00000009350	APOBEC1	91	68.519	Felis_catus
ENSEEUG00000009112	-	65	46.154	ENSFALG00000007257	-	71	46.154	Ficedula_albicollis
ENSEEUG00000009112	-	91	57.353	ENSFDAG00000018470	APOBEC1	98	57.353	Fukomys_damarensis
ENSEEUG00000009112	-	76	39.655	ENSGAGG00000021745	-	64	41.379	Gopherus_agassizii
ENSEEUG00000009112	-	85	40.933	ENSGAGG00000021744	-	75	40.933	Gopherus_agassizii
ENSEEUG00000009112	-	77	46.286	ENSGAGG00000004947	-	84	51.111	Gopherus_agassizii
ENSEEUG00000009112	-	76	42.690	ENSGAGG00000006624	-	62	42.690	Gopherus_agassizii
ENSEEUG00000009112	-	91	47.343	ENSGAGG00000011837	-	88	50.370	Gopherus_agassizii
ENSEEUG00000009112	-	97	61.468	ENSHGLG00000001495	APOBEC1	92	61.468	Heterocephalus_glaber_female
ENSEEUG00000009112	-	97	61.927	ENSHGLG00100002187	APOBEC1	92	61.927	Heterocephalus_glaber_male
ENSEEUG00000009112	-	96	53.488	ENSSTOG00000021971	APOBEC1	100	68.367	Ictidomys_tridecemlineatus
ENSEEUG00000009112	-	96	59.259	ENSJJAG00000022108	Apobec1	94	59.259	Jaculus_jaculus
ENSEEUG00000009112	-	98	62.273	ENSLAFG00000030837	APOBEC1	99	62.273	Loxodonta_africana
ENSEEUG00000009112	-	98	65.611	ENSMFAG00000000277	APOBEC1	98	65.608	Macaca_fascicularis
ENSEEUG00000009112	-	98	65.158	ENSMNEG00000029670	APOBEC1	93	65.158	Macaca_nemestrina
ENSEEUG00000009112	-	98	65.611	ENSMLEG00000036301	APOBEC1	93	65.611	Mandrillus_leucophaeus
ENSEEUG00000009112	-	92	61.836	ENSMAUG00000022167	Apobec1	93	61.836	Mesocricetus_auratus
ENSEEUG00000009112	-	99	66.216	ENSMICG00000043645	APOBEC1	96	66.216	Microcebus_murinus
ENSEEUG00000009112	-	97	58.716	ENSMODG00000018004	APOBEC1	92	58.716	Monodelphis_domestica
ENSEEUG00000009112	-	92	62.802	ENSMUSG00000040613	Apobec1	88	65.421	Mus_musculus
ENSEEUG00000009112	-	92	63.285	MGP_PahariEiJ_G0022580	-	88	66.355	Mus_pahari
ENSEEUG00000009112	-	92	62.802	MGP_SPRETEiJ_G0029857	Apobec1	88	65.421	Mus_spretus
ENSEEUG00000009112	-	96	64.352	ENSMPUG00000017532	APOBEC1	91	64.352	Mustela_putorius_furo
ENSEEUG00000009112	-	96	62.500	ENSNGAG00000022607	Apobec1	94	62.500	Nannospalax_galili
ENSEEUG00000009112	-	98	65.158	ENSNLEG00000005342	APOBEC1	93	65.158	Nomascus_leucogenys
ENSEEUG00000009112	-	98	55.656	ENSMEUG00000013406	APOBEC1	93	55.656	Notamacropus_eugenii
ENSEEUG00000009112	-	76	57.558	ENSOPRG00000009508	-	95	57.558	Ochotona_princeps
ENSEEUG00000009112	-	98	60.455	ENSOCUG00000025736	APOBEC1	82	60.455	Oryctolagus_cuniculus
ENSEEUG00000009112	-	97	67.890	ENSOGAG00000026415	APOBEC1	92	67.890	Otolemur_garnettii
ENSEEUG00000009112	-	98	61.818	ENSOARG00000002072	APOBEC1	92	61.818	Ovis_aries
ENSEEUG00000009112	-	98	61.086	ENSPPAG00000027657	APOBEC1	93	61.086	Pan_paniscus
ENSEEUG00000009112	-	96	68.519	ENSPPRG00000012182	APOBEC1	91	68.519	Panthera_pardus
ENSEEUG00000009112	-	96	68.519	ENSPTIG00000020280	APOBEC1	91	68.519	Panthera_tigris_altaica
ENSEEUG00000009112	-	98	65.611	ENSPTRG00000004614	APOBEC1	93	65.611	Pan_troglodytes
ENSEEUG00000009112	-	98	65.611	ENSPANG00000021027	APOBEC1	93	65.611	Papio_anubis
ENSEEUG00000009112	-	56	48.333	ENSPSIG00000012791	-	71	48.333	Pelodiscus_sinensis
ENSEEUG00000009112	-	76	44.509	ENSPSIG00000012568	-	75	44.509	Pelodiscus_sinensis
ENSEEUG00000009112	-	96	61.111	ENSPEMG00000023841	Apobec1	94	61.111	Peromyscus_maniculatus_bairdii
ENSEEUG00000009112	-	97	57.798	ENSPCIG00000023973	APOBEC1	92	57.798	Phascolarctos_cinereus
ENSEEUG00000009112	-	98	64.706	ENSPPYG00000004228	APOBEC1	89	64.706	Pongo_abelii
ENSEEUG00000009112	-	77	67.630	ENSPCAG00000008733	APOBEC1	93	67.630	Procavia_capensis
ENSEEUG00000009112	-	98	66.063	ENSPCOG00000013957	APOBEC1	97	66.063	Propithecus_coquereli
ENSEEUG00000009112	-	96	50.000	ENSPVAG00000010709	APOBEC1	91	50.000	Pteropus_vampyrus
ENSEEUG00000009112	-	92	60.386	ENSRNOG00000015411	Apobec1	90	60.386	Rattus_norvegicus
ENSEEUG00000009112	-	98	65.611	ENSRBIG00000031161	APOBEC1	93	65.611	Rhinopithecus_bieti
ENSEEUG00000009112	-	98	65.611	ENSRROG00000033576	APOBEC1	98	65.608	Rhinopithecus_roxellana
ENSEEUG00000009112	-	77	67.630	ENSSBOG00000030587	APOBEC1	98	67.630	Saimiri_boliviensis_boliviensis
ENSEEUG00000009112	-	98	57.466	ENSSHAG00000008925	APOBEC1	96	57.466	Sarcophilus_harrisii
ENSEEUG00000009112	-	76	66.279	ENSSARG00000000032	-	100	66.279	Sorex_araneus
ENSEEUG00000009112	-	57	71.318	ENSSARG00000011972	-	98	71.318	Sorex_araneus
ENSEEUG00000009112	-	92	40.845	ENSSPUG00000009044	-	81	40.845	Sphenodon_punctatus
ENSEEUG00000009112	-	96	67.281	ENSSSCG00000000668	APOBEC1	92	67.281	Sus_scrofa
ENSEEUG00000009112	-	64	50.000	ENSTGUG00000013118	-	99	50.000	Taeniopygia_guttata
ENSEEUG00000009112	-	98	65.455	ENSTBEG00000010043	APOBEC1	93	65.455	Tupaia_belangeri
ENSEEUG00000009112	-	77	64.162	ENSTTRG00000014015	APOBEC1	93	64.162	Tursiops_truncatus
ENSEEUG00000009112	-	96	66.359	ENSUAMG00000011636	APOBEC1	89	66.359	Ursus_americanus
ENSEEUG00000009112	-	96	66.359	ENSUMAG00000016552	APOBEC1	89	66.359	Ursus_maritimus
ENSEEUG00000009112	-	96	66.667	ENSVPAG00000001343	APOBEC1	91	66.667	Vicugna_pacos
ENSEEUG00000009112	-	98	66.516	ENSVVUG00000010522	APOBEC1	93	66.516	Vulpes_vulpes