EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000010008 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 52420 bases
Position: chrGeneScaffold_878:37962-90381
Accession: 29318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000009160	Ago_hook	PF10427.9	7.4e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000010047	TNRC6C-201	5202	-	ENSEEUP00000009160	1733 (aa)	-	UPI0000F639CD

Gene Model

Click here to download ENSEEUG00000010008's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000010008's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000010008	TNRC6C	90	45.361	ENSEEUG00000004530	TNRC6A	83	45.361

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000010008	TNRC6C	96	92.217	ENSG00000078687	TNRC6C	100	91.579	Homo_sapiens
ENSEEUG00000010008	TNRC6C	76	57.805	ENSAPOG00000019749	tnrc6c1	92	57.876	Acanthochromis_polyacanthus
ENSEEUG00000010008	TNRC6C	96	92.373	ENSAMEG00000013756	TNRC6C	95	92.373	Ailuropoda_melanoleuca
ENSEEUG00000010008	TNRC6C	76	55.005	ENSACIG00000008075	tnrc6c1	83	56.222	Amphilophus_citrinellus
ENSEEUG00000010008	TNRC6C	74	60.828	ENSAOCG00000023968	tnrc6c1	93	56.381	Amphiprion_ocellaris
ENSEEUG00000010008	TNRC6C	76	56.810	ENSAPEG00000009020	tnrc6c1	93	56.640	Amphiprion_percula
ENSEEUG00000010008	TNRC6C	96	87.986	ENSAPLG00000005456	TNRC6C	90	87.986	Anas_platyrhynchos
ENSEEUG00000010008	TNRC6C	96	86.780	ENSACAG00000016198	TNRC6C	87	86.780	Anolis_carolinensis
ENSEEUG00000010008	TNRC6C	96	91.864	ENSANAG00000021554	TNRC6C	96	91.312	Aotus_nancymaae
ENSEEUG00000010008	TNRC6C	94	51.849	ENSACLG00000000424	tnrc6c1	93	55.026	Astatotilapia_calliptera
ENSEEUG00000010008	TNRC6C	96	86.464	ENSBTAG00000018658	TNRC6C	96	87.177	Bos_taurus
ENSEEUG00000010008	TNRC6C	96	92.047	ENSCJAG00000019431	TNRC6C	96	91.497	Callithrix_jacchus
ENSEEUG00000010008	TNRC6C	96	91.864	ENSCAFG00000005224	TNRC6C	88	91.864	Canis_familiaris
ENSEEUG00000010008	TNRC6C	96	92.034	ENSCAFG00020006661	TNRC6C	96	92.052	Canis_lupus_dingo
ENSEEUG00000010008	TNRC6C	96	86.586	ENSCHIG00000026004	TNRC6C	96	84.843	Capra_hircus
ENSEEUG00000010008	TNRC6C	93	91.312	ENSTSYG00000005403	TNRC6C	96	91.312	Carlito_syrichta
ENSEEUG00000010008	TNRC6C	96	84.095	ENSCAPG00000007307	TNRC6C	88	86.802	Cavia_aperea
ENSEEUG00000010008	TNRC6C	96	85.886	ENSCPOG00000000467	TNRC6C	96	86.802	Cavia_porcellus
ENSEEUG00000010008	TNRC6C	96	92.047	ENSCCAG00000030524	TNRC6C	96	91.682	Cebus_capucinus
ENSEEUG00000010008	TNRC6C	96	92.217	ENSCATG00000033135	TNRC6C	96	91.682	Cercocebus_atys
ENSEEUG00000010008	TNRC6C	96	88.663	ENSCLAG00000011139	TNRC6C	88	89.679	Chinchilla_lanigera
ENSEEUG00000010008	TNRC6C	96	92.203	ENSCSAG00000005167	TNRC6C	88	92.203	Chlorocebus_sabaeus
ENSEEUG00000010008	TNRC6C	76	91.040	ENSCHOG00000000088	TNRC6C	75	90.953	Choloepus_hoffmanni
ENSEEUG00000010008	TNRC6C	96	86.441	ENSCPBG00000027960	TNRC6C	96	85.582	Chrysemys_picta_bellii
ENSEEUG00000010008	TNRC6C	96	91.201	ENSCANG00000041771	TNRC6C	96	90.573	Colobus_angolensis_palliatus
ENSEEUG00000010008	TNRC6C	96	87.140	ENSCGRG00001022686	Tnrc6c	96	87.800	Cricetulus_griseus_chok1gshd
ENSEEUG00000010008	TNRC6C	96	87.140	ENSCGRG00000018041	Tnrc6c	96	87.800	Cricetulus_griseus_crigri
ENSEEUG00000010008	TNRC6C	78	53.725	ENSCSEG00000012744	tnrc6c1	89	54.163	Cynoglossus_semilaevis
ENSEEUG00000010008	TNRC6C	96	60.827	ENSDARG00000076847	tnrc6c1	92	59.982	Danio_rerio
ENSEEUG00000010008	TNRC6C	96	91.371	ENSDNOG00000003247	TNRC6C	90	91.371	Dasypus_novemcinctus
ENSEEUG00000010008	TNRC6C	96	82.125	ENSDORG00000004558	Tnrc6c	96	83.978	Dipodomys_ordii
ENSEEUG00000010008	TNRC6C	86	78.670	ENSETEG00000005527	TNRC6C	86	78.670	Echinops_telfairi
ENSEEUG00000010008	TNRC6C	97	86.197	ENSEASG00005004799	TNRC6C	96	92.778	Equus_asinus_asinus
ENSEEUG00000010008	TNRC6C	96	92.712	ENSECAG00000012486	TNRC6C	89	92.712	Equus_caballus
ENSEEUG00000010008	TNRC6C	96	88.156	ENSFCAG00000028358	TNRC6C	96	87.800	Felis_catus
ENSEEUG00000010008	TNRC6C	93	86.876	ENSFALG00000000848	TNRC6C	96	87.061	Ficedula_albicollis
ENSEEUG00000010008	TNRC6C	96	89.002	ENSFDAG00000010368	TNRC6C	96	89.171	Fukomys_damarensis
ENSEEUG00000010008	TNRC6C	88	62.541	ENSFHEG00000002936	tnrc6c1	95	51.830	Fundulus_heteroclitus
ENSEEUG00000010008	TNRC6C	96	87.140	ENSGALG00000001725	TNRC6C	96	86.506	Gallus_gallus
ENSEEUG00000010008	TNRC6C	93	55.880	ENSGAFG00000019019	tnrc6c1	91	55.657	Gambusia_affinis
ENSEEUG00000010008	TNRC6C	76	54.237	ENSGACG00000012320	tnrc6c1	86	53.922	Gasterosteus_aculeatus
ENSEEUG00000010008	TNRC6C	96	85.932	ENSGAGG00000022043	TNRC6C	94	85.956	Gopherus_agassizii
ENSEEUG00000010008	TNRC6C	96	92.047	ENSGGOG00000011304	TNRC6C	96	91.497	Gorilla_gorilla
ENSEEUG00000010008	TNRC6C	94	52.304	ENSHBUG00000010846	tnrc6c1	93	55.914	Haplochromis_burtoni
ENSEEUG00000010008	TNRC6C	96	89.002	ENSHGLG00000004809	TNRC6C	88	89.002	Heterocephalus_glaber_female
ENSEEUG00000010008	TNRC6C	96	89.002	ENSHGLG00100012597	TNRC6C	88	89.002	Heterocephalus_glaber_male
ENSEEUG00000010008	TNRC6C	96	59.947	ENSIPUG00000000818	tnrc6c1	88	60.654	Ictalurus_punctatus
ENSEEUG00000010008	TNRC6C	96	86.347	ENSSTOG00000009101	TNRC6C	96	86.255	Ictidomys_tridecemlineatus
ENSEEUG00000010008	TNRC6C	96	84.602	ENSJJAG00000017055	Tnrc6c	88	84.602	Jaculus_jaculus
ENSEEUG00000010008	TNRC6C	93	53.958	ENSKMAG00000021023	tnrc6c1	90	56.379	Kryptolebias_marmoratus
ENSEEUG00000010008	TNRC6C	96	77.441	ENSLACG00000015283	TNRC6C	96	78.655	Latimeria_chalumnae
ENSEEUG00000010008	TNRC6C	94	65.645	ENSLOCG00000013377	tnrc6c1	89	64.468	Lepisosteus_oculatus
ENSEEUG00000010008	TNRC6C	96	90.017	ENSLAFG00000011122	TNRC6C	95	90.017	Loxodonta_africana
ENSEEUG00000010008	TNRC6C	96	92.217	ENSMFAG00000043943	TNRC6C	96	91.682	Macaca_fascicularis
ENSEEUG00000010008	TNRC6C	96	92.217	ENSMMUG00000011924	TNRC6C	96	91.682	Macaca_mulatta
ENSEEUG00000010008	TNRC6C	96	92.217	ENSMNEG00000030405	TNRC6C	96	91.682	Macaca_nemestrina
ENSEEUG00000010008	TNRC6C	96	92.217	ENSMLEG00000033436	TNRC6C	96	91.682	Mandrillus_leucophaeus
ENSEEUG00000010008	TNRC6C	76	55.424	ENSMAMG00000023613	tnrc6c1	91	56.193	Mastacembelus_armatus
ENSEEUG00000010008	TNRC6C	94	52.304	ENSMZEG00005010920	tnrc6c1	93	55.026	Maylandia_zebra
ENSEEUG00000010008	TNRC6C	96	87.479	ENSMGAG00000003906	TNRC6C	89	87.479	Meleagris_gallopavo
ENSEEUG00000010008	TNRC6C	93	86.876	ENSMAUG00000021618	Tnrc6c	96	87.985	Mesocricetus_auratus
ENSEEUG00000010008	TNRC6C	96	92.047	ENSMICG00000003952	TNRC6C	96	91.682	Microcebus_murinus
ENSEEUG00000010008	TNRC6C	96	90.186	ENSMOCG00000015879	Tnrc6c	96	90.186	Microtus_ochrogaster
ENSEEUG00000010008	TNRC6C	72	55.427	ENSMMOG00000005203	tnrc6c1	93	55.556	Mola_mola
ENSEEUG00000010008	TNRC6C	96	85.017	ENSMODG00000001785	TNRC6C	88	84.680	Monodelphis_domestica
ENSEEUG00000010008	TNRC6C	96	88.325	MGP_CAROLIEiJ_G0017465	Tnrc6c	96	88.325	Mus_caroli
ENSEEUG00000010008	TNRC6C	96	87.986	ENSMUSG00000025571	Tnrc6c	96	87.986	Mus_musculus
ENSEEUG00000010008	TNRC6C	96	87.648	MGP_PahariEiJ_G0018593	Tnrc6c	96	87.648	Mus_pahari
ENSEEUG00000010008	TNRC6C	96	88.325	MGP_SPRETEiJ_G0018309	Tnrc6c	96	88.325	Mus_spretus
ENSEEUG00000010008	TNRC6C	96	87.627	ENSMPUG00000013348	TNRC6C	87	87.627	Mustela_putorius_furo
ENSEEUG00000010008	TNRC6C	96	82.293	ENSMLUG00000014431	TNRC6C	87	82.799	Myotis_lucifugus
ENSEEUG00000010008	TNRC6C	96	87.817	ENSNGAG00000012203	Tnrc6c	88	88.832	Nannospalax_galili
ENSEEUG00000010008	TNRC6C	92	55.596	ENSNBRG00000005344	tnrc6c1	93	56.082	Neolamprologus_brichardi
ENSEEUG00000010008	TNRC6C	96	92.034	ENSNLEG00000000047	TNRC6C	88	92.034	Nomascus_leucogenys
ENSEEUG00000010008	TNRC6C	94	85.859	ENSMEUG00000005104	TNRC6C	96	85.859	Notamacropus_eugenii
ENSEEUG00000010008	TNRC6C	93	89.834	ENSODEG00000012499	TNRC6C	96	90.018	Octodon_degus
ENSEEUG00000010008	TNRC6C	83	57.674	ENSONIG00000002210	tnrc6c1	92	58.658	Oreochromis_niloticus
ENSEEUG00000010008	TNRC6C	96	89.362	ENSOANG00000009758	-	88	89.362	Ornithorhynchus_anatinus
ENSEEUG00000010008	TNRC6C	81	77.002	ENSOCUG00000006122	TNRC6C	82	76.780	Oryctolagus_cuniculus
ENSEEUG00000010008	TNRC6C	92	54.845	ENSORLG00000009837	tnrc6c1	100	52.788	Oryzias_latipes
ENSEEUG00000010008	TNRC6C	92	52.910	ENSORLG00020016510	tnrc6c1	90	55.018	Oryzias_latipes_hni
ENSEEUG00000010008	TNRC6C	74	53.701	ENSORLG00015000171	tnrc6c1	86	55.149	Oryzias_latipes_hsok
ENSEEUG00000010008	TNRC6C	92	55.311	ENSOMEG00000000357	tnrc6c1	92	55.368	Oryzias_melastigma
ENSEEUG00000010008	TNRC6C	93	91.128	ENSOGAG00000007197	TNRC6C	96	89.649	Otolemur_garnettii
ENSEEUG00000010008	TNRC6C	92	84.095	ENSOARG00000006041	TNRC6C	87	84.095	Ovis_aries
ENSEEUG00000010008	TNRC6C	96	92.047	ENSPPAG00000027160	TNRC6C	96	91.497	Pan_paniscus
ENSEEUG00000010008	TNRC6C	96	87.648	ENSPPRG00000018881	TNRC6C	96	87.246	Panthera_pardus
ENSEEUG00000010008	TNRC6C	87	88.489	ENSPTIG00000008791	TNRC6C	82	87.500	Panthera_tigris_altaica
ENSEEUG00000010008	TNRC6C	96	91.878	ENSPTRG00000009699	TNRC6C	96	91.312	Pan_troglodytes
ENSEEUG00000010008	TNRC6C	96	92.217	ENSPANG00000019994	TNRC6C	96	91.682	Papio_anubis
ENSEEUG00000010008	TNRC6C	84	57.346	ENSPKIG00000005428	tnrc6c1	96	54.202	Paramormyrops_kingsleyae
ENSEEUG00000010008	TNRC6C	96	84.264	ENSPSIG00000018069	TNRC6C	96	84.264	Pelodiscus_sinensis
ENSEEUG00000010008	TNRC6C	60	49.610	ENSPMGG00000022911	tnrc6c1	97	45.714	Periophthalmus_magnuspinnatus
ENSEEUG00000010008	TNRC6C	96	88.832	ENSPEMG00000009785	Tnrc6c	96	90.018	Peromyscus_maniculatus_bairdii
ENSEEUG00000010008	TNRC6C	52	85.110	ENSPCIG00000017421	-	93	85.110	Phascolarctos_cinereus
ENSEEUG00000010008	TNRC6C	93	55.880	ENSPFOG00000012560	tnrc6c1	97	54.250	Poecilia_formosa
ENSEEUG00000010008	TNRC6C	87	55.971	ENSPLAG00000021055	tnrc6c1	96	53.927	Poecilia_latipinna
ENSEEUG00000010008	TNRC6C	96	92.217	ENSPPYG00000008679	TNRC6C	87	92.217	Pongo_abelii
ENSEEUG00000010008	TNRC6C	90	81.087	ENSPCAG00000012510	TNRC6C	90	81.087	Procavia_capensis
ENSEEUG00000010008	TNRC6C	93	92.421	ENSPCOG00000021451	TNRC6C	96	92.421	Propithecus_coquereli
ENSEEUG00000010008	TNRC6C	92	91.685	ENSPVAG00000002008	TNRC6C	92	91.638	Pteropus_vampyrus
ENSEEUG00000010008	TNRC6C	94	51.267	ENSPNYG00000014477	tnrc6c1	92	55.665	Pundamilia_nyererei
ENSEEUG00000010008	TNRC6C	93	86.740	ENSRNOG00000022395	Tnrc6c	96	87.661	Rattus_norvegicus
ENSEEUG00000010008	TNRC6C	96	91.878	ENSRBIG00000027777	TNRC6C	96	91.312	Rhinopithecus_bieti
ENSEEUG00000010008	TNRC6C	96	92.047	ENSRROG00000042912	TNRC6C	96	91.497	Rhinopithecus_roxellana
ENSEEUG00000010008	TNRC6C	96	91.695	ENSSBOG00000023981	TNRC6C	96	91.312	Saimiri_boliviensis_boliviensis
ENSEEUG00000010008	TNRC6C	51	81.818	ENSSHAG00000018330	-	100	81.602	Sarcophilus_harrisii
ENSEEUG00000010008	TNRC6C	72	59.331	ENSSFOG00015006475	tnrc6c1	90	58.451	Scleropages_formosus
ENSEEUG00000010008	TNRC6C	74	52.366	ENSSFOG00015004735	-	99	49.347	Scleropages_formosus
ENSEEUG00000010008	TNRC6C	91	56.522	ENSSMAG00000012761	tnrc6c1	92	57.248	Scophthalmus_maximus
ENSEEUG00000010008	TNRC6C	92	58.013	ENSSDUG00000002366	tnrc6c1	92	57.904	Seriola_dumerili
ENSEEUG00000010008	TNRC6C	83	56.026	ENSSLDG00000025613	tnrc6c1	94	55.220	Seriola_lalandi_dorsalis
ENSEEUG00000010008	TNRC6C	88	93.333	ENSSARG00000006816	TNRC6C	87	93.333	Sorex_araneus
ENSEEUG00000010008	TNRC6C	76	80.408	ENSSPUG00000007341	TNRC6C	87	80.408	Sphenodon_punctatus
ENSEEUG00000010008	TNRC6C	75	55.451	ENSSPAG00000014977	tnrc6c1	92	55.665	Stegastes_partitus
ENSEEUG00000010008	TNRC6C	93	84.488	ENSSSCG00000034373	TNRC6C	96	85.411	Sus_scrofa
ENSEEUG00000010008	TNRC6C	96	87.479	ENSTGUG00000007733	TNRC6C	96	87.648	Taeniopygia_guttata
ENSEEUG00000010008	TNRC6C	71	54.401	ENSTRUG00000011685	tnrc6c1	92	53.974	Takifugu_rubripes
ENSEEUG00000010008	TNRC6C	90	55.206	ENSTNIG00000005273	tnrc6c1	100	54.741	Tetraodon_nigroviridis
ENSEEUG00000010008	TNRC6C	58	89.844	ENSTBEG00000005046	TNRC6C	89	89.844	Tupaia_belangeri
ENSEEUG00000010008	TNRC6C	96	91.525	ENSTTRG00000010828	TNRC6C	96	91.525	Tursiops_truncatus
ENSEEUG00000010008	TNRC6C	96	92.203	ENSUMAG00000013614	TNRC6C	89	92.203	Ursus_maritimus
ENSEEUG00000010008	TNRC6C	50	82.514	ENSVPAG00000006765	-	100	82.514	Vicugna_pacos
ENSEEUG00000010008	TNRC6C	93	91.867	ENSVVUG00000015268	TNRC6C	96	91.867	Vulpes_vulpes
ENSEEUG00000010008	TNRC6C	93	73.419	ENSXETG00000019470	tnrc6c	96	73.236	Xenopus_tropicalis
ENSEEUG00000010008	TNRC6C	93	57.605	ENSXMAG00000025971	tnrc6c1	91	55.748	Xiphophorus_maculatus