EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000010306 (Gene tree)
Gene ID: -
Gene Symbol: PRDM5
Alias: PFM2
Full Name: PR/SET domain 5
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 222340 bases
Position: chrGeneScaffold_4285:470-222809
Accession: 9349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000009413	zf-C2H2	PF00096.26	1.9e-47	1	7
ENSEEUP00000009413	zf-C2H2	PF00096.26	1.9e-47	2	7
ENSEEUP00000009413	zf-C2H2	PF00096.26	1.9e-47	3	7
ENSEEUP00000009413	zf-C2H2	PF00096.26	1.9e-47	4	7
ENSEEUP00000009413	zf-C2H2	PF00096.26	1.9e-47	5	7
ENSEEUP00000009413	zf-C2H2	PF00096.26	1.9e-47	6	7
ENSEEUP00000009413	zf-C2H2	PF00096.26	1.9e-47	7	7
ENSEEUP00000009413	zf-met	PF12874.7	1e-15	1	3
ENSEEUP00000009413	zf-met	PF12874.7	1e-15	2	3
ENSEEUP00000009413	zf-met	PF12874.7	1e-15	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000010325	PRDM5-201	1728	-	ENSEEUP00000009413	576 (aa)	-	UPI0000F641CC

Gene Model

Click here to download ENSEEUG00000010306's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000010306's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000010306	PRDM5	51	42.857	ENSEEUG00000007221	WT1	52	42.857
ENSEEUG00000010306	PRDM5	50	35.821	ENSEEUG00000010161	OVOL1	84	35.821
ENSEEUG00000010306	PRDM5	57	50.000	ENSEEUG00000008954	-	85	50.000
ENSEEUG00000010306	PRDM5	71	37.736	ENSEEUG00000012650	ZNF81	73	37.736
ENSEEUG00000010306	PRDM5	54	40.850	ENSEEUG00000007684	ZNF454	71	40.850
ENSEEUG00000010306	PRDM5	57	43.369	ENSEEUG00000009480	-	79	43.369
ENSEEUG00000010306	PRDM5	56	38.537	ENSEEUG00000008150	-	98	40.782
ENSEEUG00000010306	PRDM5	71	41.525	ENSEEUG00000007942	ZFP69B	64	47.059
ENSEEUG00000010306	PRDM5	71	40.887	ENSEEUG00000013556	-	88	40.887
ENSEEUG00000010306	PRDM5	71	42.105	ENSEEUG00000010943	-	82	42.105
ENSEEUG00000010306	PRDM5	57	38.158	ENSEEUG00000004307	GTF3A	66	38.158
ENSEEUG00000010306	PRDM5	71	40.278	ENSEEUG00000006864	ZNF235	63	40.278
ENSEEUG00000010306	PRDM5	71	38.760	ENSEEUG00000008362	-	83	38.760

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000010306	PRDM5	100	87.153	ENSG00000138738	PRDM5	99	87.153	Homo_sapiens
ENSEEUG00000010306	PRDM5	100	74.697	ENSAPOG00000023220	prdm5	99	74.697	Acanthochromis_polyacanthus
ENSEEUG00000010306	PRDM5	90	83.301	ENSAMEG00000003050	PRDM5	99	83.497	Ailuropoda_melanoleuca
ENSEEUG00000010306	PRDM5	100	72.790	ENSACIG00000000406	prdm5	99	72.790	Amphilophus_citrinellus
ENSEEUG00000010306	PRDM5	100	75.043	ENSAOCG00000014806	prdm5	99	75.043	Amphiprion_ocellaris
ENSEEUG00000010306	PRDM5	100	68.908	ENSAPEG00000016846	prdm5	95	68.908	Amphiprion_percula
ENSEEUG00000010306	PRDM5	100	74.523	ENSATEG00000013829	prdm5	99	75.043	Anabas_testudineus
ENSEEUG00000010306	PRDM5	95	77.555	ENSAPLG00000013828	PRDM5	99	77.555	Anas_platyrhynchos
ENSEEUG00000010306	PRDM5	100	72.569	ENSACAG00000012999	PRDM5	99	72.569	Anolis_carolinensis
ENSEEUG00000010306	PRDM5	100	96.875	ENSANAG00000027411	PRDM5	99	96.875	Aotus_nancymaae
ENSEEUG00000010306	PRDM5	100	74.870	ENSACLG00000017996	prdm5	99	74.870	Astatotilapia_calliptera
ENSEEUG00000010306	PRDM5	84	71.843	ENSAMXG00000041864	prdm5	99	71.843	Astyanax_mexicanus
ENSEEUG00000010306	PRDM5	100	86.285	ENSBTAG00000012111	PRDM5	99	86.285	Bos_taurus
ENSEEUG00000010306	PRDM5	100	96.875	ENSCJAG00000003133	PRDM5	99	96.875	Callithrix_jacchus
ENSEEUG00000010306	PRDM5	91	76.840	ENSCAFG00000004179	PRDM5	99	75.573	Canis_familiaris
ENSEEUG00000010306	PRDM5	100	86.979	ENSCAFG00020017685	PRDM5	99	86.979	Canis_lupus_dingo
ENSEEUG00000010306	PRDM5	100	86.458	ENSCHIG00000018772	PRDM5	99	86.458	Capra_hircus
ENSEEUG00000010306	PRDM5	95	86.239	ENSTSYG00000009630	PRDM5	95	86.239	Carlito_syrichta
ENSEEUG00000010306	PRDM5	90	95.833	ENSCAPG00000015217	PRDM5	99	95.833	Cavia_aperea
ENSEEUG00000010306	PRDM5	95	95.420	ENSCPOG00000012883	PRDM5	99	95.833	Cavia_porcellus
ENSEEUG00000010306	PRDM5	100	96.875	ENSCCAG00000023157	PRDM5	99	96.875	Cebus_capucinus
ENSEEUG00000010306	PRDM5	100	96.875	ENSCATG00000042510	PRDM5	99	96.875	Cercocebus_atys
ENSEEUG00000010306	PRDM5	95	95.420	ENSCLAG00000005392	PRDM5	99	95.833	Chinchilla_lanigera
ENSEEUG00000010306	PRDM5	100	87.153	ENSCSAG00000003729	PRDM5	99	87.153	Chlorocebus_sabaeus
ENSEEUG00000010306	PRDM5	86	84.651	ENSCHOG00000007801	PRDM5	84	84.651	Choloepus_hoffmanni
ENSEEUG00000010306	PRDM5	100	76.581	ENSCPBG00000024735	PRDM5	99	77.436	Chrysemys_picta_bellii
ENSEEUG00000010306	PRDM5	100	96.875	ENSCANG00000036807	PRDM5	99	96.875	Colobus_angolensis_palliatus
ENSEEUG00000010306	PRDM5	100	95.038	ENSCGRG00001010581	Prdm5	99	95.038	Cricetulus_griseus_chok1gshd
ENSEEUG00000010306	PRDM5	95	76.095	ENSCGRG00000010996	-	98	76.095	Cricetulus_griseus_crigri
ENSEEUG00000010306	PRDM5	100	73.830	ENSCSEG00000019979	prdm5	99	74.523	Cynoglossus_semilaevis
ENSEEUG00000010306	PRDM5	100	70.364	ENSCVAG00000013692	prdm5	99	70.884	Cyprinodon_variegatus
ENSEEUG00000010306	PRDM5	100	72.318	ENSDARG00000006288	prdm5	99	72.318	Danio_rerio
ENSEEUG00000010306	PRDM5	90	85.413	ENSDNOG00000002009	PRDM5	99	85.413	Dasypus_novemcinctus
ENSEEUG00000010306	PRDM5	100	95.802	ENSDORG00000007739	Prdm5	99	95.802	Dipodomys_ordii
ENSEEUG00000010306	PRDM5	79	85.714	ENSETEG00000020268	PRDM5	89	85.714	Echinops_telfairi
ENSEEUG00000010306	PRDM5	100	65.917	ENSEBUG00000004301	prdm5	100	65.630	Eptatretus_burgeri
ENSEEUG00000010306	PRDM5	100	96.565	ENSEASG00005018365	PRDM5	99	96.875	Equus_asinus_asinus
ENSEEUG00000010306	PRDM5	100	80.515	ENSECAG00000024747	-	99	80.515	Equus_caballus
ENSEEUG00000010306	PRDM5	100	86.397	ENSECAG00000011516	PRDM5	90	86.397	Equus_caballus
ENSEEUG00000010306	PRDM5	100	72.744	ENSELUG00000005894	prdm5	93	72.928	Esox_lucius
ENSEEUG00000010306	PRDM5	100	87.153	ENSFCAG00000025656	PRDM5	99	87.153	Felis_catus
ENSEEUG00000010306	PRDM5	98	69.470	ENSFALG00000008381	PRDM5	100	69.470	Ficedula_albicollis
ENSEEUG00000010306	PRDM5	100	95.833	ENSFDAG00000021361	PRDM5	99	95.833	Fukomys_damarensis
ENSEEUG00000010306	PRDM5	100	74.697	ENSFHEG00000013040	prdm5	99	75.043	Fundulus_heteroclitus
ENSEEUG00000010306	PRDM5	99	56.033	ENSGMOG00000012038	prdm5	100	55.556	Gadus_morhua
ENSEEUG00000010306	PRDM5	100	77.893	ENSGALG00000011963	PRDM5	99	77.893	Gallus_gallus
ENSEEUG00000010306	PRDM5	100	74.539	ENSGAFG00000019233	prdm5	95	74.908	Gambusia_affinis
ENSEEUG00000010306	PRDM5	100	75.096	ENSGAGG00000020362	PRDM5	99	76.054	Gopherus_agassizii
ENSEEUG00000010306	PRDM5	100	96.875	ENSGGOG00000013562	PRDM5	99	96.875	Gorilla_gorilla
ENSEEUG00000010306	PRDM5	100	74.350	ENSHBUG00000023375	prdm5	99	74.870	Haplochromis_burtoni
ENSEEUG00000010306	PRDM5	100	84.170	ENSHGLG00000003010	PRDM5	99	85.115	Heterocephalus_glaber_female
ENSEEUG00000010306	PRDM5	100	96.183	ENSHGLG00100003696	PRDM5	99	96.183	Heterocephalus_glaber_male
ENSEEUG00000010306	PRDM5	100	72.664	ENSHCOG00000012131	prdm5	99	74.394	Hippocampus_comes
ENSEEUG00000010306	PRDM5	100	74.221	ENSIPUG00000001248	prdm5	99	74.221	Ictalurus_punctatus
ENSEEUG00000010306	PRDM5	95	92.748	ENSSTOG00000004741	PRDM5	99	93.750	Ictidomys_tridecemlineatus
ENSEEUG00000010306	PRDM5	95	95.038	ENSJJAG00000011464	Prdm5	99	95.833	Jaculus_jaculus
ENSEEUG00000010306	PRDM5	100	74.697	ENSKMAG00000013663	prdm5	99	74.350	Kryptolebias_marmoratus
ENSEEUG00000010306	PRDM5	100	72.964	ENSLBEG00000022736	prdm5	99	74.523	Labrus_bergylta
ENSEEUG00000010306	PRDM5	91	76.099	ENSLACG00000009187	PRDM5	99	76.099	Latimeria_chalumnae
ENSEEUG00000010306	PRDM5	100	75.217	ENSLOCG00000009778	prdm5	99	75.217	Lepisosteus_oculatus
ENSEEUG00000010306	PRDM5	100	86.458	ENSLAFG00000006532	PRDM5	99	88.168	Loxodonta_africana
ENSEEUG00000010306	PRDM5	100	96.875	ENSMFAG00000045845	PRDM5	99	96.875	Macaca_fascicularis
ENSEEUG00000010306	PRDM5	100	96.875	ENSMMUG00000003249	PRDM5	99	96.875	Macaca_mulatta
ENSEEUG00000010306	PRDM5	100	96.875	ENSMNEG00000019018	PRDM5	99	96.875	Macaca_nemestrina
ENSEEUG00000010306	PRDM5	99	83.421	ENSMLEG00000023145	PRDM5	99	86.606	Mandrillus_leucophaeus
ENSEEUG00000010306	PRDM5	100	72.964	ENSMAMG00000013419	prdm5	99	74.350	Mastacembelus_armatus
ENSEEUG00000010306	PRDM5	100	74.350	ENSMZEG00005020645	prdm5	99	74.870	Maylandia_zebra
ENSEEUG00000010306	PRDM5	95	77.190	ENSMGAG00000010710	PRDM5	99	77.190	Meleagris_gallopavo
ENSEEUG00000010306	PRDM5	100	95.038	ENSMAUG00000006768	Prdm5	99	95.038	Mesocricetus_auratus
ENSEEUG00000010306	PRDM5	100	95.833	ENSMICG00000001459	PRDM5	99	95.833	Microcebus_murinus
ENSEEUG00000010306	PRDM5	100	95.038	ENSMOCG00000016267	Prdm5	99	95.038	Microtus_ochrogaster
ENSEEUG00000010306	PRDM5	100	74.523	ENSMMOG00000006035	prdm5	99	74.523	Mola_mola
ENSEEUG00000010306	PRDM5	100	74.913	ENSMODG00000018942	PRDM5	99	74.913	Monodelphis_domestica
ENSEEUG00000010306	PRDM5	100	71.404	ENSMALG00000013934	prdm5	99	71.577	Monopterus_albus
ENSEEUG00000010306	PRDM5	100	95.038	MGP_CAROLIEiJ_G0028463	Prdm5	99	95.038	Mus_caroli
ENSEEUG00000010306	PRDM5	100	94.792	ENSMUSG00000029913	Prdm5	99	94.792	Mus_musculus
ENSEEUG00000010306	PRDM5	100	95.038	MGP_PahariEiJ_G0022203	Prdm5	99	95.038	Mus_pahari
ENSEEUG00000010306	PRDM5	100	94.792	MGP_SPRETEiJ_G0029467	Prdm5	99	94.792	Mus_spretus
ENSEEUG00000010306	PRDM5	100	86.806	ENSMPUG00000017415	PRDM5	99	86.806	Mustela_putorius_furo
ENSEEUG00000010306	PRDM5	90	77.099	ENSMLUG00000006097	PRDM5	99	77.099	Myotis_lucifugus
ENSEEUG00000010306	PRDM5	100	95.420	ENSNGAG00000018317	Prdm5	99	95.420	Nannospalax_galili
ENSEEUG00000010306	PRDM5	100	68.954	ENSNBRG00000004976	prdm5	99	70.812	Neolamprologus_brichardi
ENSEEUG00000010306	PRDM5	100	96.875	ENSNLEG00000009107	PRDM5	99	96.875	Nomascus_leucogenys
ENSEEUG00000010306	PRDM5	82	88.136	ENSMEUG00000006576	-	70	88.136	Notamacropus_eugenii
ENSEEUG00000010306	PRDM5	81	92.395	ENSOPRG00000011066	-	73	92.424	Ochotona_princeps
ENSEEUG00000010306	PRDM5	99	95.833	ENSODEG00000009133	PRDM5	99	95.833	Octodon_degus
ENSEEUG00000010306	PRDM5	100	74.697	ENSONIG00000003111	prdm5	99	75.390	Oreochromis_niloticus
ENSEEUG00000010306	PRDM5	100	74.468	ENSOANG00000015109	PRDM5	97	73.295	Ornithorhynchus_anatinus
ENSEEUG00000010306	PRDM5	93	82.453	ENSOCUG00000013454	PRDM5	99	82.453	Oryctolagus_cuniculus
ENSEEUG00000010306	PRDM5	100	74.523	ENSORLG00000016247	prdm5	99	74.003	Oryzias_latipes
ENSEEUG00000010306	PRDM5	100	74.177	ENSORLG00020018051	prdm5	99	74.350	Oryzias_latipes_hni
ENSEEUG00000010306	PRDM5	100	74.523	ENSORLG00015013760	prdm5	99	74.003	Oryzias_latipes_hsok
ENSEEUG00000010306	PRDM5	100	74.740	ENSOMEG00000005143	prdm5	99	75.260	Oryzias_melastigma
ENSEEUG00000010306	PRDM5	83	77.987	ENSOGAG00000009996	PRDM5	97	77.547	Otolemur_garnettii
ENSEEUG00000010306	PRDM5	95	84.489	ENSOARG00000015473	PRDM5	100	84.026	Ovis_aries
ENSEEUG00000010306	PRDM5	99	83.595	ENSPPAG00000043045	PRDM5	100	86.789	Pan_paniscus
ENSEEUG00000010306	PRDM5	100	87.153	ENSPPRG00000001020	PRDM5	99	87.153	Panthera_pardus
ENSEEUG00000010306	PRDM5	95	86.972	ENSPTIG00000010807	PRDM5	95	86.972	Panthera_tigris_altaica
ENSEEUG00000010306	PRDM5	100	96.875	ENSPTRG00000016403	PRDM5	99	96.875	Pan_troglodytes
ENSEEUG00000010306	PRDM5	100	96.875	ENSPANG00000023612	PRDM5	99	96.875	Papio_anubis
ENSEEUG00000010306	PRDM5	100	52.669	ENSPKIG00000015492	prdm5	99	53.726	Paramormyrops_kingsleyae
ENSEEUG00000010306	PRDM5	100	77.547	ENSPSIG00000013505	PRDM5	99	77.547	Pelodiscus_sinensis
ENSEEUG00000010306	PRDM5	100	69.844	ENSPMGG00000012622	prdm5	99	71.404	Periophthalmus_magnuspinnatus
ENSEEUG00000010306	PRDM5	71	66.423	ENSPMAG00000005248	prdm5	99	66.423	Petromyzon_marinus
ENSEEUG00000010306	PRDM5	100	69.630	ENSPFOG00000018630	prdm5	99	70.370	Poecilia_formosa
ENSEEUG00000010306	PRDM5	100	75.043	ENSPLAG00000014148	prdm5	99	75.217	Poecilia_latipinna
ENSEEUG00000010306	PRDM5	100	75.043	ENSPMEG00000018002	prdm5	99	75.217	Poecilia_mexicana
ENSEEUG00000010306	PRDM5	100	75.043	ENSPREG00000018366	prdm5	99	75.217	Poecilia_reticulata
ENSEEUG00000010306	PRDM5	100	87.153	ENSPPYG00000015031	PRDM5	99	87.153	Pongo_abelii
ENSEEUG00000010306	PRDM5	95	80.000	ENSPCAG00000011671	PRDM5	99	80.000	Procavia_capensis
ENSEEUG00000010306	PRDM5	100	95.833	ENSPCOG00000022828	PRDM5	99	95.833	Propithecus_coquereli
ENSEEUG00000010306	PRDM5	95	80.550	ENSPVAG00000012309	PRDM5	99	80.550	Pteropus_vampyrus
ENSEEUG00000010306	PRDM5	100	74.870	ENSPNYG00000012194	prdm5	99	74.870	Pundamilia_nyererei
ENSEEUG00000010306	PRDM5	93	70.467	ENSPNAG00000023191	-	99	70.467	Pygocentrus_nattereri
ENSEEUG00000010306	PRDM5	100	74.523	ENSPNAG00000026181	prdm5	99	74.523	Pygocentrus_nattereri
ENSEEUG00000010306	PRDM5	100	82.986	ENSRNOG00000023679	Prdm5	99	82.986	Rattus_norvegicus
ENSEEUG00000010306	PRDM5	100	96.875	ENSRBIG00000041307	PRDM5	99	96.875	Rhinopithecus_bieti
ENSEEUG00000010306	PRDM5	95	74.728	ENSRROG00000035343	PRDM5	99	76.147	Rhinopithecus_roxellana
ENSEEUG00000010306	PRDM5	100	96.875	ENSSBOG00000022100	PRDM5	99	96.875	Saimiri_boliviensis_boliviensis
ENSEEUG00000010306	PRDM5	90	72.336	ENSSHAG00000003250	PRDM5	100	72.541	Sarcophilus_harrisii
ENSEEUG00000010306	PRDM5	100	70.884	ENSSFOG00015020478	prdm5	99	70.364	Scleropages_formosus
ENSEEUG00000010306	PRDM5	100	75.563	ENSSMAG00000018844	prdm5	99	75.563	Scophthalmus_maximus
ENSEEUG00000010306	PRDM5	100	74.870	ENSSDUG00000020397	prdm5	99	75.043	Seriola_dumerili
ENSEEUG00000010306	PRDM5	100	75.217	ENSSLDG00000013353	prdm5	99	75.043	Seriola_lalandi_dorsalis
ENSEEUG00000010306	PRDM5	79	96.825	ENSSARG00000014129	-	70	96.825	Sorex_araneus
ENSEEUG00000010306	PRDM5	100	88.168	ENSSPUG00000009941	PRDM5	99	88.542	Sphenodon_punctatus
ENSEEUG00000010306	PRDM5	100	75.043	ENSSPAG00000013866	prdm5	99	75.043	Stegastes_partitus
ENSEEUG00000010306	PRDM5	100	87.326	ENSSSCG00000009101	PRDM5	99	87.326	Sus_scrofa
ENSEEUG00000010306	PRDM5	95	77.798	ENSTGUG00000001920	PRDM5	99	77.798	Taeniopygia_guttata
ENSEEUG00000010306	PRDM5	100	72.444	ENSTRUG00000013850	prdm5	99	73.657	Takifugu_rubripes
ENSEEUG00000010306	PRDM5	100	58.997	ENSTNIG00000005901	prdm5	99	58.997	Tetraodon_nigroviridis
ENSEEUG00000010306	PRDM5	95	80.548	ENSTBEG00000015386	PRDM5	85	80.548	Tupaia_belangeri
ENSEEUG00000010306	PRDM5	100	86.285	ENSTTRG00000010996	PRDM5	99	86.285	Tursiops_truncatus
ENSEEUG00000010306	PRDM5	95	94.444	ENSUAMG00000009994	PRDM5	77	94.444	Ursus_americanus
ENSEEUG00000010306	PRDM5	95	96.565	ENSUMAG00000003733	PRDM5	98	96.565	Ursus_maritimus
ENSEEUG00000010306	PRDM5	97	81.004	ENSVPAG00000007435	PRDM5	99	81.004	Vicugna_pacos
ENSEEUG00000010306	PRDM5	93	86.679	ENSVVUG00000013192	PRDM5	99	86.679	Vulpes_vulpes
ENSEEUG00000010306	PRDM5	100	72.664	ENSXETG00000002101	prdm5	99	72.270	Xenopus_tropicalis
ENSEEUG00000010306	PRDM5	100	74.697	ENSXCOG00000008567	prdm5	99	75.217	Xiphophorus_couchianus
ENSEEUG00000010306	PRDM5	100	74.697	ENSXMAG00000013825	prdm5	99	75.217	Xiphophorus_maculatus