EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000010415 (Gene tree)
Gene ID: -
Gene Symbol: YBX3
Alias: CSDA|CSDA1|ZONAB|dbpA
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 24470 bases
Position: chrGeneScaffold_489:66221-90690
Accession: 2428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000009494	CSD	PF00313.22	4.4e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000010411	YBX3-201	855	-	ENSEEUP00000009494	284 (aa)	-	UPI0000F63593

Gene Model

Click here to download ENSEEUG00000010415's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000010415's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000010415	YBX3	99	53.684	ENSEEUG00000007494	-	76	52.982

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000010415	YBX3	100	92.254	ENSG00000060138	YBX3	91	97.619	Homo_sapiens
ENSEEUG00000010415	YBX3	100	92.606	ENSAMEG00000009393	YBX3	81	92.254	Ailuropoda_melanoleuca
ENSEEUG00000010415	YBX3	100	66.316	ENSAPLG00000003147	YBX3	99	65.263	Anas_platyrhynchos
ENSEEUG00000010415	YBX3	98	80.000	ENSANAG00000033366	-	67	83.019	Aotus_nancymaae
ENSEEUG00000010415	YBX3	100	92.254	ENSANAG00000024492	-	90	92.254	Aotus_nancymaae
ENSEEUG00000010415	YBX3	100	89.085	ENSBTAG00000009663	YBX3	75	85.563	Bos_taurus
ENSEEUG00000010415	YBX3	69	87.611	ENSCJAG00000033824	-	73	84.167	Callithrix_jacchus
ENSEEUG00000010415	YBX3	100	92.254	ENSCJAG00000021660	-	77	92.254	Callithrix_jacchus
ENSEEUG00000010415	YBX3	100	92.958	ENSCAFG00000013401	YBX3	83	92.045	Canis_familiaris
ENSEEUG00000010415	YBX3	100	89.437	ENSCAFG00020006412	YBX3	75	89.085	Canis_lupus_dingo
ENSEEUG00000010415	YBX3	100	89.085	ENSCHIG00000010863	YBX3	79	88.732	Capra_hircus
ENSEEUG00000010415	YBX3	100	55.986	ENSTSYG00000035821	-	69	96.471	Carlito_syrichta
ENSEEUG00000010415	YBX3	100	94.014	ENSTSYG00000004204	-	87	94.014	Carlito_syrichta
ENSEEUG00000010415	YBX3	100	87.324	ENSCAPG00000015039	YBX3	92	86.972	Cavia_aperea
ENSEEUG00000010415	YBX3	100	87.324	ENSCPOG00000011329	YBX3	83	86.972	Cavia_porcellus
ENSEEUG00000010415	YBX3	100	92.254	ENSCCAG00000016469	YBX3	76	92.254	Cebus_capucinus
ENSEEUG00000010415	YBX3	100	91.549	ENSCATG00000034411	YBX3	76	91.549	Cercocebus_atys
ENSEEUG00000010415	YBX3	100	87.676	ENSCLAG00000016030	YBX3	93	87.324	Chinchilla_lanigera
ENSEEUG00000010415	YBX3	100	91.901	ENSCSAG00000008744	YBX3	76	91.901	Chlorocebus_sabaeus
ENSEEUG00000010415	YBX3	100	78.246	ENSCPBG00000014147	YBX3	79	77.895	Chrysemys_picta_bellii
ENSEEUG00000010415	YBX3	100	91.901	ENSCANG00000036801	YBX3	90	91.901	Colobus_angolensis_palliatus
ENSEEUG00000010415	YBX3	100	91.901	ENSCGRG00001016148	Ybx3	78	90.493	Cricetulus_griseus_chok1gshd
ENSEEUG00000010415	YBX3	100	90.311	ENSCGRG00000004563	Ybx3	97	88.927	Cricetulus_griseus_crigri
ENSEEUG00000010415	YBX3	100	89.789	ENSDORG00000009103	Ybx3	80	89.437	Dipodomys_ordii
ENSEEUG00000010415	YBX3	100	82.746	ENSETEG00000002557	YBX3	99	82.746	Echinops_telfairi
ENSEEUG00000010415	YBX3	100	85.915	ENSEASG00005014726	YBX3	76	85.563	Equus_asinus_asinus
ENSEEUG00000010415	YBX3	100	89.085	ENSECAG00000013777	YBX3	76	88.732	Equus_caballus
ENSEEUG00000010415	YBX3	100	95.070	ENSFCAG00000027748	YBX3	76	95.070	Felis_catus
ENSEEUG00000010415	YBX3	100	64.111	ENSFALG00000003661	YBX3	99	60.279	Ficedula_albicollis
ENSEEUG00000010415	YBX3	100	84.155	ENSFDAG00000021192	YBX3	91	83.099	Fukomys_damarensis
ENSEEUG00000010415	YBX3	100	59.507	ENSGALG00000031890	YBX3	73	54.035	Gallus_gallus
ENSEEUG00000010415	YBX3	100	74.126	ENSGAGG00000017780	YBX3	79	73.776	Gopherus_agassizii
ENSEEUG00000010415	YBX3	100	92.254	ENSGGOG00000001352	YBX3	76	92.254	Gorilla_gorilla
ENSEEUG00000010415	YBX3	93	78.030	ENSHGLG00000015495	-	77	74.621	Heterocephalus_glaber_female
ENSEEUG00000010415	YBX3	100	75.347	ENSHGLG00000014798	-	84	76.736	Heterocephalus_glaber_female
ENSEEUG00000010415	YBX3	69	100.000	ENSHGLG00100003589	YBX3	86	63.732	Heterocephalus_glaber_male
ENSEEUG00000010415	YBX3	100	85.563	ENSSTOG00000002108	-	87	81.944	Ictidomys_tridecemlineatus
ENSEEUG00000010415	YBX3	100	85.915	ENSSTOG00000032577	-	80	86.268	Ictidomys_tridecemlineatus
ENSEEUG00000010415	YBX3	100	66.084	ENSJJAG00000014239	Ybx3	90	84.416	Jaculus_jaculus
ENSEEUG00000010415	YBX3	100	92.254	ENSLAFG00000017247	YBX3	83	86.525	Loxodonta_africana
ENSEEUG00000010415	YBX3	100	91.549	ENSMFAG00000039369	YBX3	76	91.549	Macaca_fascicularis
ENSEEUG00000010415	YBX3	100	91.549	ENSMMUG00000022469	YBX3	87	91.549	Macaca_mulatta
ENSEEUG00000010415	YBX3	100	91.901	ENSMNEG00000045109	YBX3	76	91.901	Macaca_nemestrina
ENSEEUG00000010415	YBX3	100	91.549	ENSMLEG00000033618	YBX3	78	91.549	Mandrillus_leucophaeus
ENSEEUG00000010415	YBX3	100	65.614	ENSMGAG00000014224	YBX3	92	100.000	Meleagris_gallopavo
ENSEEUG00000010415	YBX3	100	91.549	ENSMAUG00000012185	Ybx3	88	90.141	Mesocricetus_auratus
ENSEEUG00000010415	YBX3	81	81.560	ENSMICG00000031459	-	74	75.000	Microcebus_murinus
ENSEEUG00000010415	YBX3	100	91.197	ENSMICG00000038002	-	76	90.845	Microcebus_murinus
ENSEEUG00000010415	YBX3	100	91.901	ENSMOCG00000016291	Ybx3	92	90.493	Microtus_ochrogaster
ENSEEUG00000010415	YBX3	100	82.456	ENSMODG00000018248	YBX3	90	82.456	Monodelphis_domestica
ENSEEUG00000010415	YBX3	100	91.197	MGP_CAROLIEiJ_G0028947	Ybx3	78	89.789	Mus_caroli
ENSEEUG00000010415	YBX3	100	91.197	ENSMUSG00000030189	Ybx3	78	89.789	Mus_musculus
ENSEEUG00000010415	YBX3	100	91.901	MGP_PahariEiJ_G0022709	Ybx3	78	90.493	Mus_pahari
ENSEEUG00000010415	YBX3	100	91.549	MGP_SPRETEiJ_G0029994	Ybx3	78	90.141	Mus_spretus
ENSEEUG00000010415	YBX3	99	78.351	ENSMPUG00000011810	YBX3	77	77.320	Mustela_putorius_furo
ENSEEUG00000010415	YBX3	93	92.193	ENSMLUG00000007476	YBX3	100	90.706	Myotis_lucifugus
ENSEEUG00000010415	YBX3	99	84.561	ENSNGAG00000000710	Ybx3	88	60.000	Nannospalax_galili
ENSEEUG00000010415	YBX3	100	88.028	ENSNLEG00000034844	YBX3	81	88.028	Nomascus_leucogenys
ENSEEUG00000010415	YBX3	61	77.907	ENSMEUG00000002507	-	80	77.907	Notamacropus_eugenii
ENSEEUG00000010415	YBX3	100	82.394	ENSODEG00000017957	YBX3	83	82.042	Octodon_degus
ENSEEUG00000010415	YBX3	96	88.235	ENSOCUG00000001889	YBX3	81	85.461	Oryctolagus_cuniculus
ENSEEUG00000010415	YBX3	100	87.629	ENSOGAG00000013245	YBX3	77	87.285	Otolemur_garnettii
ENSEEUG00000010415	YBX3	100	75.874	ENSOARG00000020919	YBX3	96	79.514	Ovis_aries
ENSEEUG00000010415	YBX3	100	92.254	ENSPPAG00000039068	YBX3	79	92.254	Pan_paniscus
ENSEEUG00000010415	YBX3	100	94.718	ENSPPRG00000005859	YBX3	76	94.718	Panthera_pardus
ENSEEUG00000010415	YBX3	100	92.958	ENSPTIG00000005322	YBX3	80	92.606	Panthera_tigris_altaica
ENSEEUG00000010415	YBX3	100	92.254	ENSPTRG00000004681	YBX3	76	92.254	Pan_troglodytes
ENSEEUG00000010415	YBX3	100	91.549	ENSPANG00000010280	YBX3	76	91.549	Papio_anubis
ENSEEUG00000010415	YBX3	74	99.029	ENSPSIG00000009247	YBX3	91	100.000	Pelodiscus_sinensis
ENSEEUG00000010415	YBX3	69	100.000	ENSPEMG00000010391	-	81	64.437	Peromyscus_maniculatus_bairdii
ENSEEUG00000010415	YBX3	100	91.197	ENSPEMG00000012132	-	89	90.845	Peromyscus_maniculatus_bairdii
ENSEEUG00000010415	YBX3	91	78.846	ENSPCIG00000029949	YBX3	100	76.923	Phascolarctos_cinereus
ENSEEUG00000010415	YBX3	100	91.901	ENSPPYG00000004279	YBX3	77	91.901	Pongo_abelii
ENSEEUG00000010415	YBX3	72	95.588	ENSPCAG00000001397	YBX3	71	95.588	Procavia_capensis
ENSEEUG00000010415	YBX3	61	90.116	ENSPCOG00000011663	YBX3	66	90.116	Propithecus_coquereli
ENSEEUG00000010415	YBX3	100	79.577	ENSPVAG00000006740	YBX3	53	96.482	Pteropus_vampyrus
ENSEEUG00000010415	YBX3	100	91.549	ENSRNOG00000005480	Ybx3	78	90.141	Rattus_norvegicus
ENSEEUG00000010415	YBX3	100	92.254	ENSRBIG00000039208	YBX3	77	92.254	Rhinopithecus_bieti
ENSEEUG00000010415	YBX3	100	92.254	ENSRROG00000029638	YBX3	77	92.254	Rhinopithecus_roxellana
ENSEEUG00000010415	YBX3	100	92.606	ENSSBOG00000030573	YBX3	84	92.606	Saimiri_boliviensis_boliviensis
ENSEEUG00000010415	YBX3	100	80.690	ENSSHAG00000003262	YBX3	97	80.690	Sarcophilus_harrisii
ENSEEUG00000010415	YBX3	100	93.662	ENSSSCG00000000633	YBX3	74	93.662	Sus_scrofa
ENSEEUG00000010415	YBX3	100	94.366	ENSTBEG00000012570	YBX3	78	94.366	Tupaia_belangeri
ENSEEUG00000010415	YBX3	93	84.211	ENSTTRG00000008045	YBX3	100	84.211	Tursiops_truncatus
ENSEEUG00000010415	YBX3	98	88.849	ENSUAMG00000016662	YBX3	100	88.489	Ursus_americanus
ENSEEUG00000010415	YBX3	100	92.254	ENSUMAG00000016118	YBX3	93	91.901	Ursus_maritimus
ENSEEUG00000010415	YBX3	100	70.423	ENSVPAG00000000876	YBX3	100	70.423	Vicugna_pacos
ENSEEUG00000010415	YBX3	98	88.849	ENSVVUG00000004956	YBX3	100	88.489	Vulpes_vulpes
ENSEEUG00000010415	YBX3	68	92.941	ENSXETG00000016239	ybx3	89	51.351	Xenopus_tropicalis