EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000010466 (Gene tree)
Gene ID: -
Gene Symbol: ZNF408
Alias: FLJ12827
Full Name: zinc finger protein 408
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 46219 bases
Position: chrGeneScaffold_7581:126914-173132
Accession: 20041
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000009546	zf-C2H2	PF00096.26	4.1e-41	1	8
ENSEEUP00000009546	zf-C2H2	PF00096.26	4.1e-41	2	8
ENSEEUP00000009546	zf-C2H2	PF00096.26	4.1e-41	3	8
ENSEEUP00000009546	zf-C2H2	PF00096.26	4.1e-41	4	8
ENSEEUP00000009546	zf-C2H2	PF00096.26	4.1e-41	5	8
ENSEEUP00000009546	zf-C2H2	PF00096.26	4.1e-41	6	8
ENSEEUP00000009546	zf-C2H2	PF00096.26	4.1e-41	7	8
ENSEEUP00000009546	zf-C2H2	PF00096.26	4.1e-41	8	8
ENSEEUP00000009546	zf-met	PF12874.7	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000010472	ZNF408-201	2076	-	ENSEEUP00000009546	691 (aa)	-	UPI0000F63DDD

Gene Model

Click here to download ENSEEUG00000010466's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000010466's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000010466	ZNF408	51	36.638	ENSEEUG00000007942	ZFP69B	73	36.364
ENSEEUG00000010466	ZNF408	57	35.433	ENSEEUG00000008150	-	97	37.407
ENSEEUG00000010466	ZNF408	51	39.912	ENSEEUG00000007684	ZNF454	73	40.065

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000010466	ZNF408	94	69.514	ENSG00000175213	ZNF408	94	69.367	Homo_sapiens
ENSEEUG00000010466	ZNF408	100	66.898	ENSAMEG00000006904	ZNF408	100	66.759	Ailuropoda_melanoleuca
ENSEEUG00000010466	ZNF408	94	66.667	ENSANAG00000036294	ZNF408	90	72.758	Aotus_nancymaae
ENSEEUG00000010466	ZNF408	58	49.061	ENSAMXG00000032642	znf408	77	48.826	Astyanax_mexicanus
ENSEEUG00000010466	ZNF408	93	69.527	ENSCJAG00000019859	ZNF408	94	69.661	Callithrix_jacchus
ENSEEUG00000010466	ZNF408	94	69.956	ENSCAFG00000009143	ZNF408	91	69.956	Canis_familiaris
ENSEEUG00000010466	ZNF408	94	69.811	ENSCAFG00020019155	ZNF408	91	69.811	Canis_lupus_dingo
ENSEEUG00000010466	ZNF408	81	69.412	ENSCHIG00000025346	ZNF408	96	69.412	Capra_hircus
ENSEEUG00000010466	ZNF408	93	69.091	ENSTSYG00000025443	ZNF408	94	69.091	Carlito_syrichta
ENSEEUG00000010466	ZNF408	94	69.072	ENSCCAG00000029472	ZNF408	94	69.514	Cebus_capucinus
ENSEEUG00000010466	ZNF408	53	91.034	ENSCHOG00000009909	ZNF408	70	90.690	Choloepus_hoffmanni
ENSEEUG00000010466	ZNF408	94	63.368	ENSCGRG00001023588	Zfp408	94	63.516	Cricetulus_griseus_chok1gshd
ENSEEUG00000010466	ZNF408	94	63.368	ENSCGRG00000017618	Zfp408	94	63.516	Cricetulus_griseus_crigri
ENSEEUG00000010466	ZNF408	100	64.958	ENSDNOG00000047669	ZNF408	100	64.869	Dasypus_novemcinctus
ENSEEUG00000010466	ZNF408	93	65.850	ENSDORG00000000387	Zfp408	94	65.544	Dipodomys_ordii
ENSEEUG00000010466	ZNF408	52	79.699	ENSETEG00000017621	-	94	58.541	Echinops_telfairi
ENSEEUG00000010466	ZNF408	100	66.713	ENSEASG00005015461	ZNF408	100	66.713	Equus_asinus_asinus
ENSEEUG00000010466	ZNF408	94	69.781	ENSECAG00000010878	ZNF408	94	69.781	Equus_caballus
ENSEEUG00000010466	ZNF408	94	71.134	ENSFCAG00000029105	ZNF408	94	71.429	Felis_catus
ENSEEUG00000010466	ZNF408	82	43.363	ENSFHEG00000016754	-	78	43.363	Fundulus_heteroclitus
ENSEEUG00000010466	ZNF408	54	44.418	ENSGAFG00000018557	-	58	44.878	Gambusia_affinis
ENSEEUG00000010466	ZNF408	94	69.367	ENSGGOG00000010152	ZNF408	94	69.219	Gorilla_gorilla
ENSEEUG00000010466	ZNF408	81	69.900	ENSLAFG00000027848	ZNF408	96	70.184	Loxodonta_africana
ENSEEUG00000010466	ZNF408	94	70.649	ENSMICG00000045320	ZNF408	100	67.500	Microcebus_murinus
ENSEEUG00000010466	ZNF408	71	48.184	ENSMODG00000019895	-	88	47.711	Monodelphis_domestica
ENSEEUG00000010466	ZNF408	94	70.511	ENSMPUG00000005490	ZNF408	94	70.657	Mustela_putorius_furo
ENSEEUG00000010466	ZNF408	94	63.378	ENSNGAG00000000309	Zfp408	94	63.636	Nannospalax_galili
ENSEEUG00000010466	ZNF408	94	69.072	ENSNLEG00000014132	ZNF408	94	68.778	Nomascus_leucogenys
ENSEEUG00000010466	ZNF408	82	68.824	ENSOPRG00000009225	ZNF408	81	68.627	Ochotona_princeps
ENSEEUG00000010466	ZNF408	94	67.456	ENSOCUG00000010953	ZNF408	95	67.158	Oryctolagus_cuniculus
ENSEEUG00000010466	ZNF408	85	69.417	ENSOGAG00000034080	ZNF408	100	69.094	Otolemur_garnettii
ENSEEUG00000010466	ZNF408	94	69.956	ENSPPAG00000034993	ZNF408	94	69.809	Pan_paniscus
ENSEEUG00000010466	ZNF408	94	70.839	ENSPPRG00000016866	ZNF408	94	71.134	Panthera_pardus
ENSEEUG00000010466	ZNF408	94	70.219	ENSPTIG00000015467	ZNF408	94	70.657	Panthera_tigris_altaica
ENSEEUG00000010466	ZNF408	94	69.956	ENSPTRG00000003551	ZNF408	94	69.809	Pan_troglodytes
ENSEEUG00000010466	ZNF408	72	65.524	ENSPEMG00000016757	Zfp408	95	65.905	Peromyscus_maniculatus_bairdii
ENSEEUG00000010466	ZNF408	54	47.287	ENSPFOG00000001760	-	90	47.632	Poecilia_formosa
ENSEEUG00000010466	ZNF408	54	47.906	ENSPMEG00000021147	-	70	48.533	Poecilia_mexicana
ENSEEUG00000010466	ZNF408	94	70.045	ENSPPYG00000003318	ZNF408	98	72.384	Pongo_abelii
ENSEEUG00000010466	ZNF408	93	67.113	ENSPCAG00000014001	ZNF408	93	67.113	Procavia_capensis
ENSEEUG00000010466	ZNF408	94	71.429	ENSPCOG00000028698	ZNF408	100	68.377	Propithecus_coquereli
ENSEEUG00000010466	ZNF408	94	72.214	ENSPVAG00000015791	ZNF408	100	68.811	Pteropus_vampyrus
ENSEEUG00000010466	ZNF408	93	69.585	ENSSBOG00000033023	ZNF408	100	66.389	Saimiri_boliviensis_boliviensis
ENSEEUG00000010466	ZNF408	94	70.073	ENSSSCG00000023097	ZNF408	97	67.125	Sus_scrofa
ENSEEUG00000010466	ZNF408	70	85.882	ENSTBEG00000004260	ZNF408	75	84.706	Tupaia_belangeri
ENSEEUG00000010466	ZNF408	94	70.147	ENSUAMG00000026154	ZNF408	94	70.000	Ursus_americanus
ENSEEUG00000010466	ZNF408	94	70.250	ENSUMAG00000014405	ZNF408	94	70.103	Ursus_maritimus
ENSEEUG00000010466	ZNF408	94	69.767	ENSVVUG00000026805	ZNF408	91	69.622	Vulpes_vulpes
ENSEEUG00000010466	ZNF408	54	55.291	ENSXETG00000001980	znf408	100	54.762	Xenopus_tropicalis
ENSEEUG00000010466	ZNF408	60	53.846	ENSXCOG00000002869	-	79	51.163	Xiphophorus_couchianus
ENSEEUG00000010466	ZNF408	54	48.021	ENSXMAG00000018347	-	78	53.846	Xiphophorus_maculatus