EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000010642 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 60550 bases
Position: chrGeneScaffold_6792:1215-61764
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000009712	NMD3	PF04981.13	3.8e-57	1	2
ENSEEUP00000009712	NMD3	PF04981.13	3.8e-57	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000010657	-	1413	-	ENSEEUP00000009712	471 (aa)	-	UPI0000F62AAC

Gene Model

Click here to download ENSEEUG00000010642's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000010642's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000010642	-	100	69.851	ENSG00000169251	NMD3	85	96.386	Homo_sapiens
ENSEEUG00000010642	-	100	57.203	ENSAPOG00000022912	nmd3	94	57.203	Acanthochromis_polyacanthus
ENSEEUG00000010642	-	100	69.915	ENSAMEG00000001584	NMD3	93	69.915	Ailuropoda_melanoleuca
ENSEEUG00000010642	-	100	52.754	ENSACIG00000015196	nmd3	94	52.754	Amphilophus_citrinellus
ENSEEUG00000010642	-	100	57.839	ENSAOCG00000009086	nmd3	94	57.839	Amphiprion_ocellaris
ENSEEUG00000010642	-	100	57.627	ENSAPEG00000000329	nmd3	94	57.627	Amphiprion_percula
ENSEEUG00000010642	-	100	57.203	ENSATEG00000014351	nmd3	94	57.203	Anabas_testudineus
ENSEEUG00000010642	-	100	58.386	ENSAPLG00000014786	NMD3	93	58.386	Anas_platyrhynchos
ENSEEUG00000010642	-	100	60.297	ENSACAG00000007349	NMD3	93	60.297	Anolis_carolinensis
ENSEEUG00000010642	-	100	69.002	ENSANAG00000026434	NMD3	94	69.002	Aotus_nancymaae
ENSEEUG00000010642	-	100	57.627	ENSACLG00000015520	nmd3	94	57.627	Astatotilapia_calliptera
ENSEEUG00000010642	-	100	58.051	ENSAMXG00000014415	nmd3	94	58.051	Astyanax_mexicanus
ENSEEUG00000010642	-	100	69.002	ENSBTAG00000016228	NMD3	94	69.002	Bos_taurus
ENSEEUG00000010642	-	99	39.040	WBGene00012030	T25G3.3	93	39.040	Caenorhabditis_elegans
ENSEEUG00000010642	-	100	68.790	ENSCJAG00000002900	NMD3	92	68.790	Callithrix_jacchus
ENSEEUG00000010642	-	100	69.214	ENSCAFG00000014352	NMD3	92	69.214	Canis_familiaris
ENSEEUG00000010642	-	100	69.214	ENSCAFG00020021145	NMD3	93	69.214	Canis_lupus_dingo
ENSEEUG00000010642	-	100	68.577	ENSCHIG00000016015	NMD3	94	68.577	Capra_hircus
ENSEEUG00000010642	-	100	69.002	ENSTSYG00000002155	NMD3	93	69.002	Carlito_syrichta
ENSEEUG00000010642	-	85	63.500	ENSCAPG00000017861	NMD3	93	63.500	Cavia_aperea
ENSEEUG00000010642	-	90	66.351	ENSCPOG00000005953	NMD3	91	66.351	Cavia_porcellus
ENSEEUG00000010642	-	100	69.002	ENSCCAG00000037460	NMD3	94	69.002	Cebus_capucinus
ENSEEUG00000010642	-	100	69.851	ENSCATG00000030022	NMD3	94	69.851	Cercocebus_atys
ENSEEUG00000010642	-	100	68.153	ENSCLAG00000003155	NMD3	80	95.082	Chinchilla_lanigera
ENSEEUG00000010642	-	100	70.064	ENSCSAG00000012333	NMD3	94	70.064	Chlorocebus_sabaeus
ENSEEUG00000010642	-	79	66.346	ENSCHOG00000001240	NMD3	74	66.346	Choloepus_hoffmanni
ENSEEUG00000010642	-	100	59.660	ENSCPBG00000018318	NMD3	96	58.991	Chrysemys_picta_bellii
ENSEEUG00000010642	-	100	40.126	ENSCING00000002129	-	94	40.126	Ciona_intestinalis
ENSEEUG00000010642	-	92	38.710	ENSCSAVG00000001120	-	96	38.710	Ciona_savignyi
ENSEEUG00000010642	-	100	64.544	ENSCANG00000042939	NMD3	89	64.544	Colobus_angolensis_palliatus
ENSEEUG00000010642	-	79	74.359	ENSCGRG00001001792	Nmd3	86	74.359	Cricetulus_griseus_chok1gshd
ENSEEUG00000010642	-	100	69.851	ENSCGRG00000007947	Nmd3	95	69.851	Cricetulus_griseus_crigri
ENSEEUG00000010642	-	100	56.144	ENSCSEG00000017954	nmd3	94	56.144	Cynoglossus_semilaevis
ENSEEUG00000010642	-	79	82.353	ENSCVAG00000004672	nmd3	79	82.353	Cyprinodon_variegatus
ENSEEUG00000010642	-	100	55.180	ENSDARG00000015676	nmd3	94	55.180	Danio_rerio
ENSEEUG00000010642	-	100	68.153	ENSDNOG00000045222	NMD3	94	68.153	Dasypus_novemcinctus
ENSEEUG00000010642	-	79	95.918	ENSDORG00000005716	Nmd3	84	95.918	Dipodomys_ordii
ENSEEUG00000010642	-	100	39.916	FBgn0023542	Nmd3	91	39.916	Drosophila_melanogaster
ENSEEUG00000010642	-	85	75.862	ENSETEG00000003168	NMD3	79	75.862	Echinops_telfairi
ENSEEUG00000010642	-	91	41.995	ENSEBUG00000014316	nmd3	94	41.995	Eptatretus_burgeri
ENSEEUG00000010642	-	100	68.790	ENSEASG00005018672	NMD3	94	68.790	Equus_asinus_asinus
ENSEEUG00000010642	-	100	69.002	ENSECAG00000000188	NMD3	92	69.002	Equus_caballus
ENSEEUG00000010642	-	100	54.873	ENSELUG00000024123	nmd3	94	54.873	Esox_lucius
ENSEEUG00000010642	-	100	69.002	ENSFCAG00000022867	NMD3	93	69.002	Felis_catus
ENSEEUG00000010642	-	97	58.333	ENSFALG00000008711	NMD3	96	58.333	Ficedula_albicollis
ENSEEUG00000010642	-	100	57.749	ENSFDAG00000012197	-	94	57.749	Fukomys_damarensis
ENSEEUG00000010642	-	100	68.577	ENSFDAG00000013724	-	93	68.577	Fukomys_damarensis
ENSEEUG00000010642	-	100	56.356	ENSFHEG00000000415	nmd3	94	56.356	Fundulus_heteroclitus
ENSEEUG00000010642	-	100	54.873	ENSGMOG00000009675	nmd3	97	54.873	Gadus_morhua
ENSEEUG00000010642	-	100	59.236	ENSGALG00000009533	NMD3	93	59.236	Gallus_gallus
ENSEEUG00000010642	-	100	56.780	ENSGAFG00000012798	nmd3	89	56.780	Gambusia_affinis
ENSEEUG00000010642	-	100	55.932	ENSGACG00000010028	nmd3	94	55.932	Gasterosteus_aculeatus
ENSEEUG00000010642	-	100	59.873	ENSGAGG00000006556	NMD3	93	59.873	Gopherus_agassizii
ENSEEUG00000010642	-	100	56.051	ENSGGOG00000028590	-	91	56.051	Gorilla_gorilla
ENSEEUG00000010642	-	100	70.064	ENSGGOG00000007157	NMD3	94	70.064	Gorilla_gorilla
ENSEEUG00000010642	-	100	57.627	ENSHBUG00000001781	nmd3	94	57.627	Haplochromis_burtoni
ENSEEUG00000010642	-	100	69.214	ENSHGLG00000014451	-	94	69.214	Heterocephalus_glaber_female
ENSEEUG00000010642	-	100	56.263	ENSHGLG00000010477	-	93	56.263	Heterocephalus_glaber_female
ENSEEUG00000010642	-	100	56.688	ENSHGLG00100001042	-	93	56.688	Heterocephalus_glaber_male
ENSEEUG00000010642	-	100	69.214	ENSHGLG00100006613	-	94	69.214	Heterocephalus_glaber_male
ENSEEUG00000010642	-	100	56.568	ENSHCOG00000004292	nmd3	86	56.568	Hippocampus_comes
ENSEEUG00000010642	-	100	57.203	ENSIPUG00000005073	nmd3	94	57.203	Ictalurus_punctatus
ENSEEUG00000010642	-	100	70.276	ENSSTOG00000001899	NMD3	94	70.276	Ictidomys_tridecemlineatus
ENSEEUG00000010642	-	100	68.577	ENSJJAG00000019759	Nmd3	96	68.577	Jaculus_jaculus
ENSEEUG00000010642	-	100	58.263	ENSKMAG00000020427	nmd3	94	58.263	Kryptolebias_marmoratus
ENSEEUG00000010642	-	100	55.907	ENSLBEG00000022216	nmd3	94	55.907	Labrus_bergylta
ENSEEUG00000010642	-	100	53.291	ENSLACG00000005731	NMD3	96	54.265	Latimeria_chalumnae
ENSEEUG00000010642	-	100	58.263	ENSLOCG00000003561	nmd3	93	58.263	Lepisosteus_oculatus
ENSEEUG00000010642	-	100	67.585	ENSLAFG00000007231	NMD3	94	67.585	Loxodonta_africana
ENSEEUG00000010642	-	100	69.639	ENSMFAG00000040934	NMD3	94	69.639	Macaca_fascicularis
ENSEEUG00000010642	-	100	69.639	ENSMMUG00000009564	NMD3	93	67.347	Macaca_mulatta
ENSEEUG00000010642	-	100	69.639	ENSMNEG00000034626	NMD3	94	69.639	Macaca_nemestrina
ENSEEUG00000010642	-	90	66.197	ENSMLEG00000002741	NMD3	96	66.197	Mandrillus_leucophaeus
ENSEEUG00000010642	-	100	55.932	ENSMAMG00000012427	nmd3	94	55.932	Mastacembelus_armatus
ENSEEUG00000010642	-	100	57.627	ENSMZEG00005016888	nmd3	94	57.627	Maylandia_zebra
ENSEEUG00000010642	-	100	59.236	ENSMGAG00000010498	NMD3	93	59.236	Meleagris_gallopavo
ENSEEUG00000010642	-	100	69.214	ENSMAUG00000000633	Nmd3	94	69.214	Mesocricetus_auratus
ENSEEUG00000010642	-	100	68.790	ENSMICG00000049196	NMD3	94	68.790	Microcebus_murinus
ENSEEUG00000010642	-	100	68.365	ENSMOCG00000005180	Nmd3	94	68.365	Microtus_ochrogaster
ENSEEUG00000010642	-	100	57.082	ENSMMOG00000012765	nmd3	94	57.082	Mola_mola
ENSEEUG00000010642	-	63	77.966	ENSMODG00000016296	NMD3	57	77.966	Monodelphis_domestica
ENSEEUG00000010642	-	100	56.992	ENSMALG00000009256	nmd3	94	56.992	Monopterus_albus
ENSEEUG00000010642	-	100	69.851	MGP_CAROLIEiJ_G0025069	Nmd3	80	95.082	Mus_caroli
ENSEEUG00000010642	-	100	69.639	ENSMUSG00000027787	Nmd3	80	95.082	Mus_musculus
ENSEEUG00000010642	-	100	69.639	MGP_PahariEiJ_G0026512	Nmd3	80	95.082	Mus_pahari
ENSEEUG00000010642	-	100	69.639	MGP_SPRETEiJ_G0026011	Nmd3	80	95.082	Mus_spretus
ENSEEUG00000010642	-	100	69.851	ENSMPUG00000002955	NMD3	93	69.851	Mustela_putorius_furo
ENSEEUG00000010642	-	100	64.346	ENSMLUG00000000701	NMD3	94	64.346	Myotis_lucifugus
ENSEEUG00000010642	-	100	69.639	ENSNGAG00000012307	Nmd3	94	69.639	Nannospalax_galili
ENSEEUG00000010642	-	100	57.203	ENSNBRG00000003324	nmd3	94	57.203	Neolamprologus_brichardi
ENSEEUG00000010642	-	100	69.851	ENSNLEG00000004655	NMD3	94	69.851	Nomascus_leucogenys
ENSEEUG00000010642	-	100	68.153	ENSODEG00000006270	NMD3	96	68.153	Octodon_degus
ENSEEUG00000010642	-	100	58.263	ENSONIG00000003643	nmd3	94	58.263	Oreochromis_niloticus
ENSEEUG00000010642	-	100	70.064	ENSOCUG00000017454	NMD3	94	70.064	Oryctolagus_cuniculus
ENSEEUG00000010642	-	100	56.144	ENSORLG00000006279	nmd3	94	56.144	Oryzias_latipes
ENSEEUG00000010642	-	100	56.356	ENSORLG00020003843	nmd3	94	56.356	Oryzias_latipes_hni
ENSEEUG00000010642	-	100	56.263	ENSORLG00015006379	nmd3	94	56.263	Oryzias_latipes_hsok
ENSEEUG00000010642	-	100	57.203	ENSOMEG00000012144	nmd3	94	57.203	Oryzias_melastigma
ENSEEUG00000010642	-	100	68.790	ENSOGAG00000014910	NMD3	94	68.790	Otolemur_garnettii
ENSEEUG00000010642	-	100	68.432	ENSOARG00000001883	NMD3	92	68.432	Ovis_aries
ENSEEUG00000010642	-	100	69.851	ENSPPAG00000043829	NMD3	94	69.851	Pan_paniscus
ENSEEUG00000010642	-	100	69.214	ENSPPRG00000000724	NMD3	92	69.214	Panthera_pardus
ENSEEUG00000010642	-	100	69.214	ENSPTIG00000016761	NMD3	93	69.214	Panthera_tigris_altaica
ENSEEUG00000010642	-	100	69.851	ENSPTRG00000015586	NMD3	94	69.851	Pan_troglodytes
ENSEEUG00000010642	-	100	69.851	ENSPANG00000006665	NMD3	89	69.851	Papio_anubis
ENSEEUG00000010642	-	100	56.780	ENSPKIG00000009928	nmd3	94	56.780	Paramormyrops_kingsleyae
ENSEEUG00000010642	-	100	59.873	ENSPSIG00000007591	NMD3	93	59.873	Pelodiscus_sinensis
ENSEEUG00000010642	-	100	52.119	ENSPMGG00000014015	nmd3	94	52.119	Periophthalmus_magnuspinnatus
ENSEEUG00000010642	-	100	69.214	ENSPEMG00000021880	Nmd3	95	69.214	Peromyscus_maniculatus_bairdii
ENSEEUG00000010642	-	100	61.571	ENSPCIG00000020869	NMD3	97	60.225	Phascolarctos_cinereus
ENSEEUG00000010642	-	100	56.992	ENSPFOG00000012103	nmd3	94	56.992	Poecilia_formosa
ENSEEUG00000010642	-	100	56.992	ENSPLAG00000008087	nmd3	94	56.992	Poecilia_latipinna
ENSEEUG00000010642	-	100	56.992	ENSPMEG00000008506	nmd3	94	56.992	Poecilia_mexicana
ENSEEUG00000010642	-	100	56.992	ENSPREG00000001848	nmd3	94	56.992	Poecilia_reticulata
ENSEEUG00000010642	-	100	69.851	ENSPPYG00000014263	NMD3	94	69.851	Pongo_abelii
ENSEEUG00000010642	-	66	76.549	ENSPCAG00000009851	NMD3	67	76.549	Procavia_capensis
ENSEEUG00000010642	-	58	96.154	ENSPVAG00000003301	NMD3	54	96.154	Pteropus_vampyrus
ENSEEUG00000010642	-	100	57.415	ENSPNYG00000006778	nmd3	94	57.415	Pundamilia_nyererei
ENSEEUG00000010642	-	100	56.780	ENSPNAG00000009442	nmd3	94	56.780	Pygocentrus_nattereri
ENSEEUG00000010642	-	100	69.214	ENSRNOG00000009310	Nmd3	94	69.214	Rattus_norvegicus
ENSEEUG00000010642	-	85	96.154	ENSRBIG00000040379	NMD3	84	96.154	Rhinopithecus_bieti
ENSEEUG00000010642	-	85	96.154	ENSRROG00000036181	NMD3	84	96.154	Rhinopithecus_roxellana
ENSEEUG00000010642	-	100	33.943	YHR170W	NMD3	93	34.146	Saccharomyces_cerevisiae
ENSEEUG00000010642	-	100	69.002	ENSSBOG00000024021	NMD3	94	69.002	Saimiri_boliviensis_boliviensis
ENSEEUG00000010642	-	100	57.684	ENSSHAG00000016044	NMD3	94	57.684	Sarcophilus_harrisii
ENSEEUG00000010642	-	100	56.356	ENSSFOG00015003609	nmd3	94	56.356	Scleropages_formosus
ENSEEUG00000010642	-	85	76.623	ENSSMAG00000012887	nmd3	82	76.623	Scophthalmus_maximus
ENSEEUG00000010642	-	100	56.568	ENSSDUG00000023721	nmd3	94	56.568	Seriola_dumerili
ENSEEUG00000010642	-	100	56.568	ENSSLDG00000006565	nmd3	94	56.568	Seriola_lalandi_dorsalis
ENSEEUG00000010642	-	100	69.639	ENSSARG00000010402	NMD3	96	69.639	Sorex_araneus
ENSEEUG00000010642	-	100	60.297	ENSSPUG00000018791	NMD3	94	60.297	Sphenodon_punctatus
ENSEEUG00000010642	-	100	57.627	ENSSPAG00000014328	nmd3	94	57.627	Stegastes_partitus
ENSEEUG00000010642	-	100	68.790	ENSSSCG00000022952	NMD3	94	68.790	Sus_scrofa
ENSEEUG00000010642	-	94	56.502	ENSTGUG00000015141	-	97	56.502	Taeniopygia_guttata
ENSEEUG00000010642	-	100	59.660	ENSTGUG00000011140	-	94	59.660	Taeniopygia_guttata
ENSEEUG00000010642	-	100	56.568	ENSTRUG00000005958	nmd3	94	56.568	Takifugu_rubripes
ENSEEUG00000010642	-	61	71.751	ENSTBEG00000011783	-	57	71.751	Tupaia_belangeri
ENSEEUG00000010642	-	85	92.208	ENSTTRG00000012938	NMD3	80	92.208	Tursiops_truncatus
ENSEEUG00000010642	-	82	65.116	ENSUAMG00000009305	-	96	65.116	Ursus_americanus
ENSEEUG00000010642	-	100	70.064	ENSUMAG00000011070	NMD3	95	70.064	Ursus_maritimus
ENSEEUG00000010642	-	100	68.577	ENSVPAG00000008779	NMD3	94	68.577	Vicugna_pacos
ENSEEUG00000010642	-	100	69.427	ENSVVUG00000023055	NMD3	94	69.427	Vulpes_vulpes
ENSEEUG00000010642	-	100	60.510	ENSXETG00000027727	nmd3	93	60.510	Xenopus_tropicalis
ENSEEUG00000010642	-	62	68.367	ENSXCOG00000012490	nmd3	80	68.367	Xiphophorus_couchianus
ENSEEUG00000010642	-	100	56.992	ENSXMAG00000018406	nmd3	94	56.992	Xiphophorus_maculatus