EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000010943 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 1238 bases
Position: chrscaffold_346210:10772-12009
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000009986	zf-C2H2	PF00096.26	8.1e-28	1	5
ENSEEUP00000009986	zf-C2H2	PF00096.26	8.1e-28	2	5
ENSEEUP00000009986	zf-C2H2	PF00096.26	8.1e-28	3	5
ENSEEUP00000009986	zf-C2H2	PF00096.26	8.1e-28	4	5
ENSEEUP00000009986	zf-C2H2	PF00096.26	8.1e-28	5	5
ENSEEUP00000009986	zf-met	PF12874.7	6.2e-10	1	2
ENSEEUP00000009986	zf-met	PF12874.7	6.2e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000010954	-	840	-	ENSEEUP00000009986	279 (aa)	-	UPI0000F62881

Gene Model

Click here to download ENSEEUG00000010943's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000010943's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000010943	-	73	37.415	ENSEEUG00000000198	GFI1	52	37.415
ENSEEUG00000010943	-	90	46.330	ENSEEUG00000012650	ZNF81	82	46.330
ENSEEUG00000010943	-	54	33.663	ENSEEUG00000010161	OVOL1	63	33.663
ENSEEUG00000010943	-	82	47.120	ENSEEUG00000013454	ZNF768	53	47.120
ENSEEUG00000010943	-	67	42.000	ENSEEUG00000012609	-	75	42.000
ENSEEUG00000010943	-	85	57.727	ENSEEUG00000008954	-	88	59.756
ENSEEUG00000010943	-	84	71.951	ENSEEUG00000013556	-	99	71.951
ENSEEUG00000010943	-	80	65.128	ENSEEUG00000009480	-	84	65.128
ENSEEUG00000010943	-	80	50.000	ENSEEUG00000008362	-	88	50.000
ENSEEUG00000010943	-	74	42.975	ENSEEUG00000007221	WT1	51	42.975
ENSEEUG00000010943	-	90	52.885	ENSEEUG00000006864	ZNF235	65	52.885
ENSEEUG00000010943	-	82	42.105	ENSEEUG00000010306	PRDM5	71	42.105
ENSEEUG00000010943	-	72	34.239	ENSEEUG00000004307	GTF3A	64	34.783
ENSEEUG00000010943	-	85	44.706	ENSEEUG00000008150	-	100	44.706
ENSEEUG00000010943	-	82	49.749	ENSEEUG00000007684	ZNF454	77	49.749
ENSEEUG00000010943	-	93	50.256	ENSEEUG00000007942	ZFP69B	75	50.962

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000010943	-	84	55.814	ENSDORG00000023595	Zfp35	86	55.814	Dipodomys_ordii
ENSEEUG00000010943	-	85	52.469	ENSXETG00000032038	-	91	52.469	Xenopus_tropicalis