EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000011288 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 41527 bases
Position: chrGeneScaffold_2967:16430-57956
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000010290	RRM_1	PF00076.22	1.8e-32	1	2
ENSEEUP00000010290	RRM_1	PF00076.22	1.8e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000011280	-	1542	-	ENSEEUP00000010290	513 (aa)	-	UPI0000F62930

Gene Model

Click here to download ENSEEUG00000011288's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000011288's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000011288	-	51	64.368	ENSEEUG00000014404	NONO	56	64.368

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000011288	-	100	65.010	ENSG00000121390	PSPC1	91	87.111	Homo_sapiens
ENSEEUG00000011288	-	51	70.385	ENSAPOG00000015946	pspc1	62	70.385	Acanthochromis_polyacanthus
ENSEEUG00000011288	-	88	82.500	ENSAMEG00000017420	PSPC1	73	93.443	Ailuropoda_melanoleuca
ENSEEUG00000011288	-	51	69.615	ENSACIG00000018695	pspc1	53	69.498	Amphilophus_citrinellus
ENSEEUG00000011288	-	51	70.385	ENSAOCG00000005279	pspc1	61	70.385	Amphiprion_ocellaris
ENSEEUG00000011288	-	51	70.385	ENSAPEG00000015927	pspc1	61	70.385	Amphiprion_percula
ENSEEUG00000011288	-	51	70.385	ENSATEG00000004878	pspc1	51	70.385	Anabas_testudineus
ENSEEUG00000011288	-	51	81.967	ENSAPLG00000006246	PSPC1	65	81.967	Anas_platyrhynchos
ENSEEUG00000011288	-	51	65.134	ENSAPLG00000003643	SFPQ	50	65.134	Anas_platyrhynchos
ENSEEUG00000011288	-	72	75.000	ENSACAG00000002093	PSPC1	72	74.688	Anolis_carolinensis
ENSEEUG00000011288	-	88	82.500	ENSANAG00000000059	PSPC1	92	82.812	Aotus_nancymaae
ENSEEUG00000011288	-	51	68.462	ENSACLG00000027220	pspc1	55	68.462	Astatotilapia_calliptera
ENSEEUG00000011288	-	88	83.699	ENSBTAG00000003934	PSPC1	90	83.699	Bos_taurus
ENSEEUG00000011288	-	88	82.500	ENSCJAG00000004554	PSPC1	92	82.812	Callithrix_jacchus
ENSEEUG00000011288	-	100	65.067	ENSCAFG00020002009	PSPC1	88	82.188	Canis_lupus_dingo
ENSEEUG00000011288	-	88	83.699	ENSCHIG00000016708	PSPC1	88	83.699	Capra_hircus
ENSEEUG00000011288	-	65	83.838	ENSTSYG00000032882	PSPC1	75	83.838	Carlito_syrichta
ENSEEUG00000011288	-	100	65.192	ENSCPOG00000000395	PSPC1	82	83.386	Cavia_porcellus
ENSEEUG00000011288	-	100	65.451	ENSCCAG00000033498	PSPC1	88	82.812	Cebus_capucinus
ENSEEUG00000011288	-	100	64.818	ENSCATG00000036434	PSPC1	88	81.988	Cercocebus_atys
ENSEEUG00000011288	-	77	69.084	ENSCLAG00000005241	PSPC1	87	88.525	Chinchilla_lanigera
ENSEEUG00000011288	-	73	95.082	ENSCHOG00000008913	PSPC1	74	95.082	Choloepus_hoffmanni
ENSEEUG00000011288	-	72	81.967	ENSCPBG00000020859	PSPC1	72	81.967	Chrysemys_picta_bellii
ENSEEUG00000011288	-	51	91.803	ENSCANG00000018948	PSPC1	61	91.803	Colobus_angolensis_palliatus
ENSEEUG00000011288	-	88	84.112	ENSCGRG00001018368	Pspc1	73	95.082	Cricetulus_griseus_chok1gshd
ENSEEUG00000011288	-	88	84.112	ENSCGRG00000011724	Pspc1	73	95.082	Cricetulus_griseus_crigri
ENSEEUG00000011288	-	52	67.037	ENSCVAG00000007679	-	50	68.898	Cyprinodon_variegatus
ENSEEUG00000011288	-	72	62.975	ENSDARG00000006621	pspc1	62	62.658	Danio_rerio
ENSEEUG00000011288	-	100	64.627	ENSDNOG00000011078	PSPC1	73	91.803	Dasypus_novemcinctus
ENSEEUG00000011288	-	88	79.503	ENSDORG00000016050	Pspc1	73	88.525	Dipodomys_ordii
ENSEEUG00000011288	-	58	42.236	ENSEBUG00000010133	pspc1	72	45.818	Eptatretus_burgeri
ENSEEUG00000011288	-	88	83.648	ENSEASG00005000119	PSPC1	73	93.443	Equus_asinus_asinus
ENSEEUG00000011288	-	88	83.648	ENSECAG00000017286	PSPC1	73	93.443	Equus_caballus
ENSEEUG00000011288	-	77	54.854	ENSELUG00000003746	pspc1	62	74.231	Esox_lucius
ENSEEUG00000011288	-	100	66.027	ENSFCAG00000027841	PSPC1	88	81.875	Felis_catus
ENSEEUG00000011288	-	65	83.942	ENSFALG00000008750	PSPC1	87	76.087	Ficedula_albicollis
ENSEEUG00000011288	-	88	84.295	ENSFDAG00000002617	PSPC1	89	86.885	Fukomys_damarensis
ENSEEUG00000011288	-	51	72.308	ENSGMOG00000015074	pspc1	50	72.308	Gadus_morhua
ENSEEUG00000011288	-	72	81.967	ENSGALG00000017142	PSPC1	87	75.701	Gallus_gallus
ENSEEUG00000011288	-	52	66.667	ENSGAFG00000006327	pspc1	54	68.077	Gambusia_affinis
ENSEEUG00000011288	-	51	65.000	ENSGACG00000014901	pspc1	73	65.000	Gasterosteus_aculeatus
ENSEEUG00000011288	-	72	81.967	ENSGAGG00000019164	PSPC1	72	81.967	Gopherus_agassizii
ENSEEUG00000011288	-	100	64.818	ENSGGOG00000003414	PSPC1	88	81.056	Gorilla_gorilla
ENSEEUG00000011288	-	61	59.327	ENSHBUG00000001139	pspc1	63	59.202	Haplochromis_burtoni
ENSEEUG00000011288	-	88	83.386	ENSHGLG00000018811	PSPC1	73	86.885	Heterocephalus_glaber_female
ENSEEUG00000011288	-	61	83.333	ENSHGLG00100007962	PSPC1	91	83.333	Heterocephalus_glaber_male
ENSEEUG00000011288	-	53	62.191	ENSHCOG00000013251	pspc1	58	64.885	Hippocampus_comes
ENSEEUG00000011288	-	61	65.217	ENSIPUG00000013192	pspc1	53	72.901	Ictalurus_punctatus
ENSEEUG00000011288	-	100	64.818	ENSSTOG00000026833	PSPC1	73	93.443	Ictidomys_tridecemlineatus
ENSEEUG00000011288	-	100	64.751	ENSJJAG00000018334	Pspc1	89	93.443	Jaculus_jaculus
ENSEEUG00000011288	-	51	57.692	ENSKMAG00000013525	-	60	57.692	Kryptolebias_marmoratus
ENSEEUG00000011288	-	57	63.918	ENSLBEG00000004474	pspc1	56	66.923	Labrus_bergylta
ENSEEUG00000011288	-	72	70.000	ENSLACG00000010762	PSPC1	87	65.951	Latimeria_chalumnae
ENSEEUG00000011288	-	87	69.453	ENSLOCG00000010832	pspc1	87	69.453	Lepisosteus_oculatus
ENSEEUG00000011288	-	87	80.997	ENSLAFG00000010968	PSPC1	73	93.443	Loxodonta_africana
ENSEEUG00000011288	-	100	64.818	ENSMFAG00000032728	PSPC1	88	81.988	Macaca_fascicularis
ENSEEUG00000011288	-	100	64.818	ENSMMUG00000020262	PSPC1	88	81.988	Macaca_mulatta
ENSEEUG00000011288	-	100	64.818	ENSMNEG00000027401	PSPC1	88	81.988	Macaca_nemestrina
ENSEEUG00000011288	-	88	83.838	ENSMLEG00000039043	PSPC1	67	100.000	Mandrillus_leucophaeus
ENSEEUG00000011288	-	51	68.462	ENSMAMG00000004333	pspc1	57	61.667	Mastacembelus_armatus
ENSEEUG00000011288	-	51	68.462	ENSMZEG00005005726	pspc1	55	68.462	Maylandia_zebra
ENSEEUG00000011288	-	52	81.967	ENSMGAG00000015134	PSPC1	84	80.882	Meleagris_gallopavo
ENSEEUG00000011288	-	61	84.112	ENSMAUG00000021067	Pspc1	71	83.489	Mesocricetus_auratus
ENSEEUG00000011288	-	88	82.500	ENSMICG00000013970	PSPC1	73	91.803	Microcebus_murinus
ENSEEUG00000011288	-	100	65.392	ENSMOCG00000006060	Pspc1	73	96.721	Microtus_ochrogaster
ENSEEUG00000011288	-	61	80.745	ENSMODG00000008029	PSPC1	52	80.745	Monodelphis_domestica
ENSEEUG00000011288	-	51	67.308	ENSMALG00000008914	pspc1	53	67.176	Monopterus_albus
ENSEEUG00000011288	-	88	81.988	MGP_CAROLIEiJ_G0019341	Pspc1	84	89.796	Mus_caroli
ENSEEUG00000011288	-	88	81.988	ENSMUSG00000021938	Pspc1	83	89.796	Mus_musculus
ENSEEUG00000011288	-	88	81.988	MGP_PahariEiJ_G0030359	Pspc1	84	89.796	Mus_pahari
ENSEEUG00000011288	-	88	81.988	MGP_SPRETEiJ_G0020232	Pspc1	84	89.796	Mus_spretus
ENSEEUG00000011288	-	88	82.188	ENSMPUG00000013347	PSPC1	73	93.443	Mustela_putorius_furo
ENSEEUG00000011288	-	100	66.031	ENSMLUG00000017663	PSPC1	73	95.082	Myotis_lucifugus
ENSEEUG00000011288	-	88	81.677	ENSNGAG00000011271	Pspc1	88	82.555	Nannospalax_galili
ENSEEUG00000011288	-	61	59.939	ENSNBRG00000014059	pspc1	78	60.000	Neolamprologus_brichardi
ENSEEUG00000011288	-	100	64.627	ENSNLEG00000001294	PSPC1	88	81.056	Nomascus_leucogenys
ENSEEUG00000011288	-	54	90.164	ENSMEUG00000000476	PSPC1	55	90.164	Notamacropus_eugenii
ENSEEUG00000011288	-	61	79.310	ENSODEG00000019012	-	62	79.310	Octodon_degus
ENSEEUG00000011288	-	88	72.414	ENSODEG00000007817	-	88	72.727	Octodon_degus
ENSEEUG00000011288	-	61	59.633	ENSONIG00000012010	pspc1	63	59.509	Oreochromis_niloticus
ENSEEUG00000011288	-	61	61.783	ENSOANG00000011381	-	62	62.058	Ornithorhynchus_anatinus
ENSEEUG00000011288	-	78	59.900	ENSOANG00000009017	-	86	88.525	Ornithorhynchus_anatinus
ENSEEUG00000011288	-	89	93.443	ENSOCUG00000006153	PSPC1	73	93.443	Oryctolagus_cuniculus
ENSEEUG00000011288	-	51	70.000	ENSORLG00000004232	-	51	70.000	Oryzias_latipes
ENSEEUG00000011288	-	51	70.385	ENSORLG00020000578	PSPC1	51	70.385	Oryzias_latipes_hni
ENSEEUG00000011288	-	51	70.000	ENSORLG00015017480	pspc1	51	70.000	Oryzias_latipes_hsok
ENSEEUG00000011288	-	100	65.201	ENSOGAG00000012643	PSPC1	73	95.082	Otolemur_garnettii
ENSEEUG00000011288	-	88	80.128	ENSOARG00000014163	PSPC1	71	93.443	Ovis_aries
ENSEEUG00000011288	-	77	86.923	ENSPPAG00000009836	PSPC1	90	86.641	Pan_paniscus
ENSEEUG00000011288	-	100	66.027	ENSPPRG00000008833	PSPC1	88	81.875	Panthera_pardus
ENSEEUG00000011288	-	88	64.103	ENSPTIG00000016917	PSPC1	87	64.423	Panthera_tigris_altaica
ENSEEUG00000011288	-	83	81.505	ENSPTRG00000005677	PSPC1	87	91.667	Pan_troglodytes
ENSEEUG00000011288	-	100	64.818	ENSPANG00000001992	PSPC1	88	81.988	Papio_anubis
ENSEEUG00000011288	-	61	66.250	ENSPKIG00000003578	pspc1	50	75.000	Paramormyrops_kingsleyae
ENSEEUG00000011288	-	72	81.967	ENSPSIG00000005168	PSPC1	86	75.710	Pelodiscus_sinensis
ENSEEUG00000011288	-	53	61.594	ENSPMGG00000015135	pspc1	72	63.077	Periophthalmus_magnuspinnatus
ENSEEUG00000011288	-	88	82.298	ENSPEMG00000015214	Pspc1	73	96.721	Peromyscus_maniculatus_bairdii
ENSEEUG00000011288	-	55	40.830	ENSPMAG00000004618	pspc1	78	42.412	Petromyzon_marinus
ENSEEUG00000011288	-	87	80.997	ENSPCIG00000017680	PSPC1	73	90.164	Phascolarctos_cinereus
ENSEEUG00000011288	-	56	64.286	ENSPFOG00000003362	pspc1	51	68.846	Poecilia_formosa
ENSEEUG00000011288	-	56	64.286	ENSPLAG00000011540	pspc1	50	68.846	Poecilia_latipinna
ENSEEUG00000011288	-	56	63.605	ENSPMEG00000008322	pspc1	50	68.077	Poecilia_mexicana
ENSEEUG00000011288	-	56	63.265	ENSPREG00000007786	pspc1	50	67.692	Poecilia_reticulata
ENSEEUG00000011288	-	100	64.491	ENSPPYG00000005186	PSPC1	88	81.562	Pongo_abelii
ENSEEUG00000011288	-	73	91.803	ENSPCOG00000014364	PSPC1	76	91.803	Propithecus_coquereli
ENSEEUG00000011288	-	88	83.333	ENSPVAG00000005036	PSPC1	88	84.591	Pteropus_vampyrus
ENSEEUG00000011288	-	61	59.327	ENSPNYG00000008893	pspc1	68	59.202	Pundamilia_nyererei
ENSEEUG00000011288	-	61	63.385	ENSPNAG00000016511	pspc1	56	72.692	Pygocentrus_nattereri
ENSEEUG00000011288	-	88	81.620	ENSRNOG00000020782	Pspc1	73	95.082	Rattus_norvegicus
ENSEEUG00000011288	-	81	83.217	ENSRBIG00000036057	PSPC1	82	87.023	Rhinopithecus_bieti
ENSEEUG00000011288	-	88	81.366	ENSRROG00000036334	PSPC1	88	81.366	Rhinopithecus_roxellana
ENSEEUG00000011288	-	67	78.469	ENSSBOG00000028172	PSPC1	75	81.863	Saimiri_boliviensis_boliviensis
ENSEEUG00000011288	-	88	80.745	ENSSHAG00000004696	PSPC1	73	90.164	Sarcophilus_harrisii
ENSEEUG00000011288	-	51	74.231	ENSSFOG00015001395	pspc1	56	74.231	Scleropages_formosus
ENSEEUG00000011288	-	57	63.481	ENSSMAG00000001761	pspc1	64	67.568	Scophthalmus_maximus
ENSEEUG00000011288	-	51	70.769	ENSSDUG00000010651	pspc1	52	64.214	Seriola_dumerili
ENSEEUG00000011288	-	51	70.385	ENSSLDG00000004284	pspc1	59	63.667	Seriola_lalandi_dorsalis
ENSEEUG00000011288	-	73	91.803	ENSSARG00000000888	PSPC1	88	83.019	Sorex_araneus
ENSEEUG00000011288	-	72	80.328	ENSSPUG00000008550	PSPC1	76	80.328	Sphenodon_punctatus
ENSEEUG00000011288	-	88	82.555	ENSSSCG00000009569	PSPC1	88	84.112	Sus_scrofa
ENSEEUG00000011288	-	63	86.312	ENSTGUG00000011295	PSPC1	69	86.260	Taeniopygia_guttata
ENSEEUG00000011288	-	51	62.214	ENSTRUG00000011335	pspc1	51	62.214	Takifugu_rubripes
ENSEEUG00000011288	-	51	62.692	ENSTNIG00000010358	pspc1	55	62.692	Tetraodon_nigroviridis
ENSEEUG00000011288	-	69	77.273	ENSTBEG00000002361	PSPC1	78	60.697	Tupaia_belangeri
ENSEEUG00000011288	-	88	84.277	ENSTTRG00000003343	PSPC1	88	84.639	Tursiops_truncatus
ENSEEUG00000011288	-	61	82.500	ENSUAMG00000012309	PSPC1	92	82.812	Ursus_americanus
ENSEEUG00000011288	-	81	83.274	ENSUMAG00000013993	PSPC1	82	86.641	Ursus_maritimus
ENSEEUG00000011288	-	65	83.838	ENSVPAG00000010029	PSPC1	84	83.838	Vicugna_pacos
ENSEEUG00000011288	-	100	65.067	ENSVVUG00000006414	PSPC1	88	82.188	Vulpes_vulpes
ENSEEUG00000011288	-	56	62.925	ENSXCOG00000017438	pspc1	61	67.308	Xiphophorus_couchianus
ENSEEUG00000011288	-	56	63.265	ENSXMAG00000007929	pspc1	61	67.692	Xiphophorus_maculatus