EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000011459 (Gene tree)
Gene ID: -
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 9317 bases
Position: chrGeneScaffold_3411:28219-37535
Accession: 6919
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000010444	MBD	PF01429.19	7.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000011451	MBD4-201	1617	-	ENSEEUP00000010444	539 (aa)	-	UPI0000F63A34

Gene Model

Click here to download ENSEEUG00000011459's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000011459's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000011459	MBD4	99	61.525	ENSG00000129071	MBD4	89	90.323	Homo_sapiens
ENSEEUG00000011459	MBD4	95	66.797	ENSAMEG00000004562	MBD4	88	66.797	Ailuropoda_melanoleuca
ENSEEUG00000011459	MBD4	52	59.292	ENSAOCG00000001157	mbd4	58	59.292	Amphiprion_ocellaris
ENSEEUG00000011459	MBD4	52	59.292	ENSAPEG00000016131	mbd4	58	59.292	Amphiprion_percula
ENSEEUG00000011459	MBD4	54	60.825	ENSAMXG00000017271	mbd4	73	60.825	Astyanax_mexicanus
ENSEEUG00000011459	MBD4	99	59.489	ENSBTAG00000021645	MBD4	95	59.489	Bos_taurus
ENSEEUG00000011459	MBD4	99	60.217	ENSCJAG00000017293	MBD4	95	60.759	Callithrix_jacchus
ENSEEUG00000011459	MBD4	99	63.158	ENSCAFG00000004867	MBD4	95	63.158	Canis_familiaris
ENSEEUG00000011459	MBD4	99	63.158	ENSCAFG00020007082	MBD4	95	63.158	Canis_lupus_dingo
ENSEEUG00000011459	MBD4	99	59.124	ENSCHIG00000009760	MBD4	95	59.124	Capra_hircus
ENSEEUG00000011459	MBD4	99	60.072	ENSCCAG00000029796	MBD4	96	59.712	Cebus_capucinus
ENSEEUG00000011459	MBD4	99	60.727	ENSCATG00000035211	MBD4	95	60.727	Cercocebus_atys
ENSEEUG00000011459	MBD4	94	62.205	ENSCLAG00000008974	MBD4	90	62.205	Chinchilla_lanigera
ENSEEUG00000011459	MBD4	93	62.897	ENSCSAG00000009037	MBD4	90	61.714	Chlorocebus_sabaeus
ENSEEUG00000011459	MBD4	88	47.870	ENSCPBG00000014704	MBD4	85	47.284	Chrysemys_picta_bellii
ENSEEUG00000011459	MBD4	93	63.294	ENSCANG00000007120	MBD4	95	60.364	Colobus_angolensis_palliatus
ENSEEUG00000011459	MBD4	94	60.000	ENSCGRG00001003507	Mbd4	88	60.594	Cricetulus_griseus_chok1gshd
ENSEEUG00000011459	MBD4	94	60.000	ENSCGRG00000010974	Mbd4	88	60.594	Cricetulus_griseus_crigri
ENSEEUG00000011459	MBD4	97	61.877	ENSDNOG00000049619	MBD4	91	61.877	Dasypus_novemcinctus
ENSEEUG00000011459	MBD4	86	54.721	ENSDORG00000000902	-	98	53.669	Dipodomys_ordii
ENSEEUG00000011459	MBD4	97	66.160	ENSEASG00005014800	MBD4	92	66.160	Equus_asinus_asinus
ENSEEUG00000011459	MBD4	97	65.589	ENSECAG00000022106	MBD4	92	65.589	Equus_caballus
ENSEEUG00000011459	MBD4	99	64.855	ENSFCAG00000000083	MBD4	95	64.855	Felis_catus
ENSEEUG00000011459	MBD4	83	43.516	ENSFALG00000013663	MBD4	95	43.671	Ficedula_albicollis
ENSEEUG00000011459	MBD4	87	42.245	ENSGMOG00000013830	mbd4	95	42.245	Gadus_morhua
ENSEEUG00000011459	MBD4	90	48.627	ENSGAGG00000018644	MBD4	88	48.627	Gopherus_agassizii
ENSEEUG00000011459	MBD4	99	60.980	ENSGGOG00000010698	MBD4	99	60.980	Gorilla_gorilla
ENSEEUG00000011459	MBD4	96	63.027	ENSHGLG00000009034	MBD4	92	63.027	Heterocephalus_glaber_female
ENSEEUG00000011459	MBD4	96	63.218	ENSHGLG00100000135	MBD4	92	63.218	Heterocephalus_glaber_male
ENSEEUG00000011459	MBD4	97	60.687	ENSSTOG00000020663	MBD4	91	60.687	Ictidomys_tridecemlineatus
ENSEEUG00000011459	MBD4	87	41.079	ENSKMAG00000015015	mbd4	92	42.292	Kryptolebias_marmoratus
ENSEEUG00000011459	MBD4	53	53.425	ENSLOCG00000013054	MBD4	95	43.222	Lepisosteus_oculatus
ENSEEUG00000011459	MBD4	95	63.424	ENSLAFG00000010609	MBD4	89	63.424	Loxodonta_africana
ENSEEUG00000011459	MBD4	99	60.291	ENSMFAG00000002266	MBD4	95	60.291	Macaca_fascicularis
ENSEEUG00000011459	MBD4	99	60.254	ENSMMUG00000012723	MBD4	95	60.254	Macaca_mulatta
ENSEEUG00000011459	MBD4	99	60.474	ENSMNEG00000029752	MBD4	99	60.474	Macaca_nemestrina
ENSEEUG00000011459	MBD4	99	60.545	ENSMLEG00000024859	MBD4	95	60.545	Mandrillus_leucophaeus
ENSEEUG00000011459	MBD4	99	61.982	ENSMICG00000008022	MBD4	95	61.982	Microcebus_murinus
ENSEEUG00000011459	MBD4	65	44.759	ENSMOCG00000002466	-	86	43.909	Microtus_ochrogaster
ENSEEUG00000011459	MBD4	88	54.697	ENSMODG00000006399	-	95	54.071	Monodelphis_domestica
ENSEEUG00000011459	MBD4	95	61.914	MGP_CAROLIEiJ_G0028760	Mbd4	89	61.914	Mus_caroli
ENSEEUG00000011459	MBD4	95	61.868	ENSMUSG00000030322	Mbd4	90	61.868	Mus_musculus
ENSEEUG00000011459	MBD4	94	61.644	MGP_PahariEiJ_G0022511	-	89	61.644	Mus_pahari
ENSEEUG00000011459	MBD4	94	61.840	MGP_SPRETEiJ_G0029788	Mbd4	90	61.840	Mus_spretus
ENSEEUG00000011459	MBD4	99	63.273	ENSMPUG00000017195	MBD4	95	63.273	Mustela_putorius_furo
ENSEEUG00000011459	MBD4	95	68.555	ENSMLUG00000014766	MBD4	94	68.555	Myotis_lucifugus
ENSEEUG00000011459	MBD4	99	61.302	ENSNLEG00000005337	MBD4	96	61.302	Nomascus_leucogenys
ENSEEUG00000011459	MBD4	97	56.654	ENSOPRG00000000473	MBD4	90	56.654	Ochotona_princeps
ENSEEUG00000011459	MBD4	87	42.191	ENSONIG00000017212	mbd4	95	42.331	Oreochromis_niloticus
ENSEEUG00000011459	MBD4	77	43.972	ENSOANG00000004589	-	94	43.972	Ornithorhynchus_anatinus
ENSEEUG00000011459	MBD4	99	53.142	ENSOCUG00000013006	MBD4	96	53.142	Oryctolagus_cuniculus
ENSEEUG00000011459	MBD4	51	84.138	ENSOMEG00000008819	mbd4	59	84.138	Oryzias_melastigma
ENSEEUG00000011459	MBD4	95	62.109	ENSOGAG00000010236	MBD4	89	62.109	Otolemur_garnettii
ENSEEUG00000011459	MBD4	99	59.489	ENSOARG00000014699	MBD4	95	59.489	Ovis_aries
ENSEEUG00000011459	MBD4	99	61.162	ENSPPAG00000036528	MBD4	95	61.162	Pan_paniscus
ENSEEUG00000011459	MBD4	99	63.406	ENSPPRG00000016480	MBD4	95	63.406	Panthera_pardus
ENSEEUG00000011459	MBD4	99	61.343	ENSPTRG00000015377	MBD4	95	61.343	Pan_troglodytes
ENSEEUG00000011459	MBD4	99	61.020	ENSPANG00000015047	MBD4	95	61.020	Papio_anubis
ENSEEUG00000011459	MBD4	88	46.943	ENSPSIG00000007892	MBD4	84	46.943	Pelodiscus_sinensis
ENSEEUG00000011459	MBD4	94	56.522	ENSPEMG00000006226	Mbd4	94	56.522	Peromyscus_maniculatus_bairdii
ENSEEUG00000011459	MBD4	90	54.767	ENSPCIG00000002276	-	93	54.767	Phascolarctos_cinereus
ENSEEUG00000011459	MBD4	99	60.727	ENSPPYG00000013417	MBD4	95	60.727	Pongo_abelii
ENSEEUG00000011459	MBD4	95	60.624	ENSPCAG00000012915	MBD4	93	60.624	Procavia_capensis
ENSEEUG00000011459	MBD4	97	67.366	ENSPVAG00000005238	MBD4	90	67.366	Pteropus_vampyrus
ENSEEUG00000011459	MBD4	50	60.638	ENSPNAG00000000509	mbd4	78	49.084	Pygocentrus_nattereri
ENSEEUG00000011459	MBD4	95	60.465	ENSRNOG00000010919	Mbd4	89	60.465	Rattus_norvegicus
ENSEEUG00000011459	MBD4	93	63.889	ENSRBIG00000027722	MBD4	95	60.909	Rhinopithecus_bieti
ENSEEUG00000011459	MBD4	93	63.690	ENSRROG00000029136	MBD4	95	60.727	Rhinopithecus_roxellana
ENSEEUG00000011459	MBD4	99	60.870	ENSSBOG00000016810	MBD4	96	60.870	Saimiri_boliviensis_boliviensis
ENSEEUG00000011459	MBD4	95	52.601	ENSSHAG00000012953	MBD4	90	52.601	Sarcophilus_harrisii
ENSEEUG00000011459	MBD4	82	52.941	ENSSARG00000004496	-	76	52.941	Sorex_araneus
ENSEEUG00000011459	MBD4	87	47.399	ENSSPUG00000017344	MBD4	87	47.619	Sphenodon_punctatus
ENSEEUG00000011459	MBD4	97	63.429	ENSSSCG00000033303	MBD4	93	63.429	Sus_scrofa
ENSEEUG00000011459	MBD4	80	91.837	ENSTBEG00000003041	-	77	91.837	Tupaia_belangeri
ENSEEUG00000011459	MBD4	99	64.299	ENSTTRG00000011265	MBD4	95	64.299	Tursiops_truncatus
ENSEEUG00000011459	MBD4	88	67.158	ENSUAMG00000000814	MBD4	95	67.158	Ursus_americanus
ENSEEUG00000011459	MBD4	99	64.416	ENSUMAG00000017542	MBD4	96	64.416	Ursus_maritimus
ENSEEUG00000011459	MBD4	67	62.420	ENSVPAG00000004040	-	67	62.420	Vicugna_pacos
ENSEEUG00000011459	MBD4	99	62.795	ENSVVUG00000014222	MBD4	95	62.795	Vulpes_vulpes
ENSEEUG00000011459	MBD4	54	80.690	ENSXMAG00000021129	mbd4	95	41.615	Xiphophorus_maculatus