EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000011721 (Gene tree)
Gene ID: -
Gene Symbol: RAB1A
Alias: RAB1|YPT1
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 28518 bases
Position: chrGeneScaffold_174:102881-131398
Accession: 9758
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000010679	MMR_HSR1	PF01926.23	7.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000011705	RAB1A-201	609	-	ENSEEUP00000010679	202 (aa)	-	UPI0000006BCB

Gene Model

Click here to download ENSEEUG00000011721's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000011721's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000011721	RAB1A	82	46.988	ENSEEUG00000014804	RAB25	71	46.988
ENSEEUG00000011721	RAB1A	99	51.741	ENSEEUG00000001233	-	99	51.741
ENSEEUG00000011721	RAB1A	57	33.058	ENSEEUG00000015705	ARL14	59	33.058
ENSEEUG00000011721	RAB1A	72	36.986	ENSEEUG00000014548	HRAS	83	36.986
ENSEEUG00000011721	RAB1A	96	43.367	ENSEEUG00000009044	RAB5A	90	43.367
ENSEEUG00000011721	RAB1A	100	93.069	ENSEEUG00000013465	RAB1B	100	93.069
ENSEEUG00000011721	RAB1A	69	54.676	ENSEEUG00000009165	-	97	54.676
ENSEEUG00000011721	RAB1A	96	42.268	ENSEEUG00000006745	RAB5B	90	42.268
ENSEEUG00000011721	RAB1A	86	32.948	ENSEEUG00000015045	RAB23	73	32.948
ENSEEUG00000011721	RAB1A	68	49.635	ENSEEUG00000013074	RAB14	64	49.635
ENSEEUG00000011721	RAB1A	82	34.731	ENSEEUG00000007832	MRAS	80	34.731
ENSEEUG00000011721	RAB1A	60	32.000	ENSEEUG00000007390	ARL4D	61	32.000
ENSEEUG00000011721	RAB1A	58	32.203	ENSEEUG00000000612	ARL8B	67	32.203
ENSEEUG00000011721	RAB1A	81	37.805	ENSEEUG00000003058	KRAS	86	37.805
ENSEEUG00000011721	RAB1A	58	47.059	ENSEEUG00000004731	RAB34	78	47.059
ENSEEUG00000011721	RAB1A	77	39.623	ENSEEUG00000005264	RAB9B	79	39.623
ENSEEUG00000011721	RAB1A	96	43.077	ENSEEUG00000002790	RAB5C	89	43.077
ENSEEUG00000011721	RAB1A	58	31.092	ENSEEUG00000012728	ARL4C	62	31.092

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000011721	RAB1A	100	100.000	ENSG00000138069	RAB1A	99	100.000	Homo_sapiens
ENSEEUG00000011721	RAB1A	100	95.545	ENSAPOG00000008143	-	100	95.545	Acanthochromis_polyacanthus
ENSEEUG00000011721	RAB1A	100	100.000	ENSAMEG00000001127	RAB1A	99	100.000	Ailuropoda_melanoleuca
ENSEEUG00000011721	RAB1A	100	95.545	ENSAOCG00000020606	-	100	95.545	Amphiprion_ocellaris
ENSEEUG00000011721	RAB1A	100	95.545	ENSAPEG00000022488	-	100	95.545	Amphiprion_percula
ENSEEUG00000011721	RAB1A	100	100.000	ENSANAG00000020929	RAB1A	99	100.000	Aotus_nancymaae
ENSEEUG00000011721	RAB1A	100	96.040	ENSACLG00000003326	-	100	96.040	Astatotilapia_calliptera
ENSEEUG00000011721	RAB1A	100	94.554	ENSAMXG00000034850	-	100	94.554	Astyanax_mexicanus
ENSEEUG00000011721	RAB1A	100	100.000	ENSBTAG00000016720	RAB1A	99	100.000	Bos_taurus
ENSEEUG00000011721	RAB1A	100	100.000	ENSCJAG00000046275	RAB1A	99	100.000	Callithrix_jacchus
ENSEEUG00000011721	RAB1A	100	100.000	ENSCAFG00000003187	RAB1A	99	100.000	Canis_familiaris
ENSEEUG00000011721	RAB1A	100	100.000	ENSCAFG00020026971	RAB1A	99	100.000	Canis_lupus_dingo
ENSEEUG00000011721	RAB1A	98	100.000	ENSCHIG00000014060	RAB1A	96	100.000	Capra_hircus
ENSEEUG00000011721	RAB1A	100	98.515	ENSTSYG00000005996	RAB1A	100	100.000	Carlito_syrichta
ENSEEUG00000011721	RAB1A	100	100.000	ENSCPOG00000015437	RAB1A	99	100.000	Cavia_porcellus
ENSEEUG00000011721	RAB1A	100	100.000	ENSCCAG00000021869	RAB1A	99	100.000	Cebus_capucinus
ENSEEUG00000011721	RAB1A	100	100.000	ENSCATG00000030853	RAB1A	99	100.000	Cercocebus_atys
ENSEEUG00000011721	RAB1A	100	100.000	ENSCLAG00000014766	RAB1A	99	100.000	Chinchilla_lanigera
ENSEEUG00000011721	RAB1A	100	99.505	ENSCPBG00000013243	RAB1A	99	99.505	Chrysemys_picta_bellii
ENSEEUG00000011721	RAB1A	100	97.525	ENSCANG00000035916	RAB1A	99	97.525	Colobus_angolensis_palliatus
ENSEEUG00000011721	RAB1A	100	100.000	ENSCGRG00001012691	-	99	100.000	Cricetulus_griseus_chok1gshd
ENSEEUG00000011721	RAB1A	100	100.000	ENSCGRG00000008456	-	99	100.000	Cricetulus_griseus_crigri
ENSEEUG00000011721	RAB1A	100	100.000	ENSDNOG00000018236	RAB1A	99	100.000	Dasypus_novemcinctus
ENSEEUG00000011721	RAB1A	100	100.000	ENSDORG00000028628	-	99	100.000	Dipodomys_ordii
ENSEEUG00000011721	RAB1A	100	84.236	FBgn0285937	Rab1	99	84.236	Drosophila_melanogaster
ENSEEUG00000011721	RAB1A	100	100.000	ENSETEG00000002205	RAB1A	100	100.000	Echinops_telfairi
ENSEEUG00000011721	RAB1A	100	100.000	ENSEASG00005007298	RAB1A	99	100.000	Equus_asinus_asinus
ENSEEUG00000011721	RAB1A	100	100.000	ENSECAG00000009926	RAB1A	99	100.000	Equus_caballus
ENSEEUG00000011721	RAB1A	100	95.588	ENSELUG00000012166	RAB1A	96	95.588	Esox_lucius
ENSEEUG00000011721	RAB1A	100	100.000	ENSFCAG00000002536	RAB1A	99	100.000	Felis_catus
ENSEEUG00000011721	RAB1A	100	97.525	ENSFALG00000013624	RAB1A	99	97.525	Ficedula_albicollis
ENSEEUG00000011721	RAB1A	100	100.000	ENSFDAG00000019505	-	99	100.000	Fukomys_damarensis
ENSEEUG00000011721	RAB1A	100	94.554	ENSFHEG00000014414	-	100	94.554	Fundulus_heteroclitus
ENSEEUG00000011721	RAB1A	100	99.505	ENSGALG00000031582	RAB1A	99	99.505	Gallus_gallus
ENSEEUG00000011721	RAB1A	100	94.554	ENSGAFG00000000918	-	100	94.554	Gambusia_affinis
ENSEEUG00000011721	RAB1A	100	99.505	ENSGAGG00000006802	RAB1A	99	99.505	Gopherus_agassizii
ENSEEUG00000011721	RAB1A	100	100.000	ENSGGOG00000026603	RAB1A	99	100.000	Gorilla_gorilla
ENSEEUG00000011721	RAB1A	100	100.000	ENSHGLG00000013585	RAB1A	99	100.000	Heterocephalus_glaber_female
ENSEEUG00000011721	RAB1A	100	98.515	ENSHGLG00100007994	RAB1A	99	98.515	Heterocephalus_glaber_male
ENSEEUG00000011721	RAB1A	100	100.000	ENSSTOG00000020693	-	99	100.000	Ictidomys_tridecemlineatus
ENSEEUG00000011721	RAB1A	98	100.000	ENSJJAG00000014396	Rab1a	100	100.000	Jaculus_jaculus
ENSEEUG00000011721	RAB1A	98	95.431	ENSKMAG00000014038	-	93	95.431	Kryptolebias_marmoratus
ENSEEUG00000011721	RAB1A	100	95.050	ENSLBEG00000028426	RAB1A	100	95.050	Labrus_bergylta
ENSEEUG00000011721	RAB1A	100	99.010	ENSLACG00000012869	RAB1A	99	99.010	Latimeria_chalumnae
ENSEEUG00000011721	RAB1A	100	100.000	ENSLAFG00000016666	RAB1A	99	100.000	Loxodonta_africana
ENSEEUG00000011721	RAB1A	100	100.000	ENSMFAG00000046246	RAB1A	99	100.000	Macaca_fascicularis
ENSEEUG00000011721	RAB1A	98	100.000	ENSMMUG00000021721	RAB1A	91	100.000	Macaca_mulatta
ENSEEUG00000011721	RAB1A	95	99.476	ENSMNEG00000028414	-	96	99.476	Macaca_nemestrina
ENSEEUG00000011721	RAB1A	100	100.000	ENSMLEG00000042535	RAB1A	99	100.000	Mandrillus_leucophaeus
ENSEEUG00000011721	RAB1A	100	96.040	ENSMZEG00005013959	-	100	96.040	Maylandia_zebra
ENSEEUG00000011721	RAB1A	98	99.492	ENSMGAG00000004611	RAB1A	98	99.492	Meleagris_gallopavo
ENSEEUG00000011721	RAB1A	100	99.505	ENSMAUG00000012156	Rab1a	99	99.505	Mesocricetus_auratus
ENSEEUG00000011721	RAB1A	100	100.000	ENSMICG00000012587	RAB1A	99	100.000	Microcebus_murinus
ENSEEUG00000011721	RAB1A	100	99.505	ENSMOCG00000017022	Rab1a	99	99.505	Microtus_ochrogaster
ENSEEUG00000011721	RAB1A	100	93.564	ENSMMOG00000018709	RAB1A	100	93.564	Mola_mola
ENSEEUG00000011721	RAB1A	100	99.505	ENSMODG00000003340	RAB1A	99	99.505	Monodelphis_domestica
ENSEEUG00000011721	RAB1A	100	100.000	MGP_CAROLIEiJ_G0016115	Rab1a	99	100.000	Mus_caroli
ENSEEUG00000011721	RAB1A	100	100.000	ENSMUSG00000020149	Rab1a	100	100.000	Mus_musculus
ENSEEUG00000011721	RAB1A	100	100.000	MGP_PahariEiJ_G0016776	Rab1a	99	100.000	Mus_pahari
ENSEEUG00000011721	RAB1A	100	100.000	MGP_SPRETEiJ_G0016958	Rab1a	100	100.000	Mus_spretus
ENSEEUG00000011721	RAB1A	100	100.000	ENSMPUG00000006139	RAB1A	80	100.000	Mustela_putorius_furo
ENSEEUG00000011721	RAB1A	100	100.000	ENSMLUG00000009489	RAB1A	99	100.000	Myotis_lucifugus
ENSEEUG00000011721	RAB1A	100	100.000	ENSNGAG00000005838	Rab1a	99	100.000	Nannospalax_galili
ENSEEUG00000011721	RAB1A	100	96.040	ENSNBRG00000020492	-	100	96.040	Neolamprologus_brichardi
ENSEEUG00000011721	RAB1A	98	100.000	ENSOPRG00000006595	RAB1A	100	100.000	Ochotona_princeps
ENSEEUG00000011721	RAB1A	95	100.000	ENSODEG00000011248	-	96	100.000	Octodon_degus
ENSEEUG00000011721	RAB1A	100	94.059	ENSONIG00000006819	-	99	94.059	Oreochromis_niloticus
ENSEEUG00000011721	RAB1A	100	99.505	ENSOANG00000012438	RAB1A	99	99.505	Ornithorhynchus_anatinus
ENSEEUG00000011721	RAB1A	100	100.000	ENSOCUG00000017003	RAB1A	99	100.000	Oryctolagus_cuniculus
ENSEEUG00000011721	RAB1A	100	100.000	ENSOGAG00000026181	RAB1A	99	100.000	Otolemur_garnettii
ENSEEUG00000011721	RAB1A	98	100.000	ENSOARG00000019997	RAB1A	97	100.000	Ovis_aries
ENSEEUG00000011721	RAB1A	100	100.000	ENSPPAG00000030253	RAB1A	100	100.000	Pan_paniscus
ENSEEUG00000011721	RAB1A	100	100.000	ENSPPRG00000025077	RAB1A	99	100.000	Panthera_pardus
ENSEEUG00000011721	RAB1A	98	100.000	ENSPTIG00000013471	RAB1A	97	100.000	Panthera_tigris_altaica
ENSEEUG00000011721	RAB1A	100	100.000	ENSPTRG00000011989	RAB1A	99	100.000	Pan_troglodytes
ENSEEUG00000011721	RAB1A	100	100.000	ENSPANG00000010485	RAB1A	99	100.000	Papio_anubis
ENSEEUG00000011721	RAB1A	100	97.030	ENSPSIG00000008028	RAB1A	99	97.030	Pelodiscus_sinensis
ENSEEUG00000011721	RAB1A	100	96.040	ENSPMGG00000021015	-	99	96.040	Periophthalmus_magnuspinnatus
ENSEEUG00000011721	RAB1A	100	100.000	ENSPEMG00000009340	Rab1a	99	100.000	Peromyscus_maniculatus_bairdii
ENSEEUG00000011721	RAB1A	100	99.505	ENSPCIG00000023212	RAB1A	99	99.505	Phascolarctos_cinereus
ENSEEUG00000011721	RAB1A	100	94.059	ENSPFOG00000000498	-	98	94.059	Poecilia_formosa
ENSEEUG00000011721	RAB1A	100	94.059	ENSPLAG00000015592	-	100	94.059	Poecilia_latipinna
ENSEEUG00000011721	RAB1A	100	94.059	ENSPMEG00000005288	-	100	94.059	Poecilia_mexicana
ENSEEUG00000011721	RAB1A	100	100.000	ENSPPYG00000012360	RAB1A	99	100.000	Pongo_abelii
ENSEEUG00000011721	RAB1A	100	100.000	ENSPCOG00000017244	RAB1A	99	100.000	Propithecus_coquereli
ENSEEUG00000011721	RAB1A	100	96.040	ENSPNYG00000015841	-	100	96.040	Pundamilia_nyererei
ENSEEUG00000011721	RAB1A	100	100.000	ENSRNOG00000004992	Rab1a	99	100.000	Rattus_norvegicus
ENSEEUG00000011721	RAB1A	100	100.000	ENSSBOG00000023732	RAB1A	99	100.000	Saimiri_boliviensis_boliviensis
ENSEEUG00000011721	RAB1A	98	99.492	ENSSHAG00000003597	RAB1A	98	98.010	Sarcophilus_harrisii
ENSEEUG00000011721	RAB1A	100	95.545	ENSSMAG00000021049	-	100	95.545	Scophthalmus_maximus
ENSEEUG00000011721	RAB1A	100	96.040	ENSSDUG00000022535	RAB1A	100	96.040	Seriola_dumerili
ENSEEUG00000011721	RAB1A	100	99.505	ENSSPUG00000012822	RAB1A	99	99.505	Sphenodon_punctatus
ENSEEUG00000011721	RAB1A	100	95.545	ENSSPAG00000012564	-	100	95.545	Stegastes_partitus
ENSEEUG00000011721	RAB1A	100	100.000	ENSSSCG00000008359	RAB1A	100	100.000	Sus_scrofa
ENSEEUG00000011721	RAB1A	100	97.525	ENSTGUG00000002328	RAB1A	99	97.525	Taeniopygia_guttata
ENSEEUG00000011721	RAB1A	100	95.050	ENSTRUG00000024994	RAB1A	100	95.050	Takifugu_rubripes
ENSEEUG00000011721	RAB1A	98	100.000	ENSUMAG00000021038	RAB1A	99	100.000	Ursus_maritimus
ENSEEUG00000011721	RAB1A	98	99.495	ENSVPAG00000005640	RAB1A	99	99.495	Vicugna_pacos
ENSEEUG00000011721	RAB1A	100	100.000	ENSVVUG00000027588	RAB1A	99	100.000	Vulpes_vulpes
ENSEEUG00000011721	RAB1A	100	94.554	ENSXMAG00000015776	-	100	94.554	Xiphophorus_maculatus