EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000011918 (Gene tree)
Gene ID: -
Gene Symbol: R3HCC1
Alias: DKFZp564N123
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 7738 bases
Position: chrGeneScaffold_1727:4734-12471
Accession: 27329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000010884	R3H	PF01424.22	2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000011927	R3HCC1-201	1359	-	ENSEEUP00000010884	453 (aa)	-	UPI0000F63EE4

Gene Model

Click here to download ENSEEUG00000011918's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000011918's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000011918	R3HCC1	97	75.621	ENSG00000104679	R3HCC1	100	90.698	Homo_sapiens
ENSEEUG00000011918	R3HCC1	68	39.716	ENSAPOG00000003616	r3hcc1	91	32.009	Acanthochromis_polyacanthus
ENSEEUG00000011918	R3HCC1	96	76.765	ENSAMEG00000002963	R3HCC1	94	75.724	Ailuropoda_melanoleuca
ENSEEUG00000011918	R3HCC1	92	33.040	ENSACIG00000017144	r3hcc1	80	36.691	Amphilophus_citrinellus
ENSEEUG00000011918	R3HCC1	90	34.813	ENSAOCG00000003945	r3hcc1	97	33.571	Amphiprion_ocellaris
ENSEEUG00000011918	R3HCC1	90	33.095	ENSAPEG00000003613	r3hcc1	97	32.339	Amphiprion_percula
ENSEEUG00000011918	R3HCC1	94	45.475	ENSACAG00000016627	R3HCC1	96	46.833	Anolis_carolinensis
ENSEEUG00000011918	R3HCC1	98	75.391	ENSANAG00000036169	R3HCC1	96	75.391	Aotus_nancymaae
ENSEEUG00000011918	R3HCC1	98	72.768	ENSBTAG00000025830	R3HCC1	98	72.991	Bos_taurus
ENSEEUG00000011918	R3HCC1	97	75.169	ENSCJAG00000020118	R3HCC1	100	69.021	Callithrix_jacchus
ENSEEUG00000011918	R3HCC1	98	72.483	ENSCAFG00000009210	R3HCC1	97	72.707	Canis_familiaris
ENSEEUG00000011918	R3HCC1	84	69.509	ENSCAFG00020012870	R3HCC1	90	69.509	Canis_lupus_dingo
ENSEEUG00000011918	R3HCC1	95	68.667	ENSCHIG00000009107	R3HCC1	98	68.889	Capra_hircus
ENSEEUG00000011918	R3HCC1	98	76.009	ENSTSYG00000000511	R3HCC1	79	76.009	Carlito_syrichta
ENSEEUG00000011918	R3HCC1	87	54.042	ENSCAPG00000015813	R3HCC1	100	54.042	Cavia_aperea
ENSEEUG00000011918	R3HCC1	96	60.970	ENSCPOG00000009696	R3HCC1	100	60.970	Cavia_porcellus
ENSEEUG00000011918	R3HCC1	97	76.072	ENSCCAG00000037811	R3HCC1	96	74.728	Cebus_capucinus
ENSEEUG00000011918	R3HCC1	99	74.074	ENSCATG00000032971	R3HCC1	100	69.248	Cercocebus_atys
ENSEEUG00000011918	R3HCC1	96	70.091	ENSCLAG00000015556	R3HCC1	86	70.089	Chinchilla_lanigera
ENSEEUG00000011918	R3HCC1	99	73.856	ENSCSAG00000016250	R3HCC1	96	74.510	Chlorocebus_sabaeus
ENSEEUG00000011918	R3HCC1	97	71.910	ENSCHOG00000000396	R3HCC1	100	70.870	Choloepus_hoffmanni
ENSEEUG00000011918	R3HCC1	99	74.074	ENSCANG00000029441	R3HCC1	96	74.074	Colobus_angolensis_palliatus
ENSEEUG00000011918	R3HCC1	92	33.485	ENSCSEG00000005748	r3hcc1	98	32.634	Cynoglossus_semilaevis
ENSEEUG00000011918	R3HCC1	92	33.652	ENSDARG00000099593	r3hcc1	97	33.413	Danio_rerio
ENSEEUG00000011918	R3HCC1	98	75.112	ENSDNOG00000007168	R3HCC1	93	75.561	Dasypus_novemcinctus
ENSEEUG00000011918	R3HCC1	96	60.288	ENSDORG00000026365	R3hcc1	99	61.555	Dipodomys_ordii
ENSEEUG00000011918	R3HCC1	99	63.656	ENSETEG00000001147	R3HCC1	99	63.656	Echinops_telfairi
ENSEEUG00000011918	R3HCC1	96	78.311	ENSEASG00005018782	R3HCC1	83	76.484	Equus_asinus_asinus
ENSEEUG00000011918	R3HCC1	98	76.718	ENSECAG00000025013	R3HCC1	97	78.311	Equus_caballus
ENSEEUG00000011918	R3HCC1	89	32.579	ENSELUG00000023650	r3hcc1	99	32.494	Esox_lucius
ENSEEUG00000011918	R3HCC1	99	75.000	ENSFCAG00000012395	R3HCC1	98	75.901	Felis_catus
ENSEEUG00000011918	R3HCC1	95	62.500	ENSFDAG00000001572	R3HCC1	98	62.500	Fukomys_damarensis
ENSEEUG00000011918	R3HCC1	93	35.214	ENSGAFG00000008747	-	92	34.963	Gambusia_affinis
ENSEEUG00000011918	R3HCC1	94	34.325	ENSGACG00000008447	r3hcc1	96	34.325	Gasterosteus_aculeatus
ENSEEUG00000011918	R3HCC1	99	74.454	ENSGGOG00000013817	R3HCC1	100	75.626	Gorilla_gorilla
ENSEEUG00000011918	R3HCC1	96	67.580	ENSHGLG00000010517	R3HCC1	95	65.502	Heterocephalus_glaber_female
ENSEEUG00000011918	R3HCC1	96	67.580	ENSHGLG00100006388	R3HCC1	95	65.502	Heterocephalus_glaber_male
ENSEEUG00000011918	R3HCC1	64	46.259	ENSHCOG00000011745	r3hcc1	71	46.259	Hippocampus_comes
ENSEEUG00000011918	R3HCC1	94	37.529	ENSIPUG00000024504	r3hcc1	87	37.995	Ictalurus_punctatus
ENSEEUG00000011918	R3HCC1	97	62.864	ENSSTOG00000027130	R3HCC1	98	62.664	Ictidomys_tridecemlineatus
ENSEEUG00000011918	R3HCC1	96	65.376	ENSJJAG00000013075	R3hcc1	100	66.667	Jaculus_jaculus
ENSEEUG00000011918	R3HCC1	57	44.697	ENSKMAG00000000286	r3hcc1	98	31.695	Kryptolebias_marmoratus
ENSEEUG00000011918	R3HCC1	95	40.487	ENSLACG00000011894	R3HCC1	97	40.807	Latimeria_chalumnae
ENSEEUG00000011918	R3HCC1	68	43.165	ENSLOCG00000015442	r3hcc1	72	44.444	Lepisosteus_oculatus
ENSEEUG00000011918	R3HCC1	99	67.409	ENSLAFG00000016137	R3HCC1	98	67.409	Loxodonta_africana
ENSEEUG00000011918	R3HCC1	99	73.856	ENSMFAG00000032894	R3HCC1	100	69.021	Macaca_fascicularis
ENSEEUG00000011918	R3HCC1	99	73.856	ENSMMUG00000016655	R3HCC1	100	69.021	Macaca_mulatta
ENSEEUG00000011918	R3HCC1	99	73.420	ENSMNEG00000043283	R3HCC1	100	68.565	Macaca_nemestrina
ENSEEUG00000011918	R3HCC1	99	73.856	ENSMLEG00000030147	R3HCC1	96	74.510	Mandrillus_leucophaeus
ENSEEUG00000011918	R3HCC1	88	32.494	ENSMAMG00000018146	r3hcc1	98	32.952	Mastacembelus_armatus
ENSEEUG00000011918	R3HCC1	97	46.532	ENSMGAG00000001356	R3HCC1	93	46.532	Meleagris_gallopavo
ENSEEUG00000011918	R3HCC1	96	62.025	ENSMAUG00000016096	R3hcc1	99	64.151	Mesocricetus_auratus
ENSEEUG00000011918	R3HCC1	99	74.890	ENSMICG00000011146	R3HCC1	97	74.890	Microcebus_murinus
ENSEEUG00000011918	R3HCC1	94	50.223	ENSMODG00000016809	-	100	50.223	Monodelphis_domestica
ENSEEUG00000011918	R3HCC1	88	31.731	ENSMALG00000000731	r3hcc1	98	31.785	Monopterus_albus
ENSEEUG00000011918	R3HCC1	96	60.896	MGP_CAROLIEiJ_G0019467	R3hcc1	99	59.267	Mus_caroli
ENSEEUG00000011918	R3HCC1	96	60.896	ENSMUSG00000034194	R3hcc1	99	60.692	Mus_musculus
ENSEEUG00000011918	R3HCC1	96	58.551	MGP_PahariEiJ_G0030484	R3hcc1	99	58.384	Mus_pahari
ENSEEUG00000011918	R3HCC1	96	60.526	MGP_SPRETEiJ_G0020359	R3hcc1	99	60.324	Mus_spretus
ENSEEUG00000011918	R3HCC1	96	75.342	ENSMPUG00000003457	R3HCC1	89	73.942	Mustela_putorius_furo
ENSEEUG00000011918	R3HCC1	96	75.000	ENSMLUG00000000266	R3HCC1	95	74.123	Myotis_lucifugus
ENSEEUG00000011918	R3HCC1	96	68.261	ENSNGAG00000016747	R3hcc1	100	68.696	Nannospalax_galili
ENSEEUG00000011918	R3HCC1	88	75.250	ENSNLEG00000015944	R3HCC1	89	74.038	Nomascus_leucogenys
ENSEEUG00000011918	R3HCC1	96	56.951	ENSMEUG00000010587	R3HCC1	99	56.726	Notamacropus_eugenii
ENSEEUG00000011918	R3HCC1	99	64.396	ENSOPRG00000013390	R3HCC1	98	64.396	Ochotona_princeps
ENSEEUG00000011918	R3HCC1	94	64.301	ENSODEG00000007529	R3HCC1	99	64.905	Octodon_degus
ENSEEUG00000011918	R3HCC1	95	59.184	ENSOANG00000013877	R3HCC1	96	59.729	Ornithorhynchus_anatinus
ENSEEUG00000011918	R3HCC1	96	68.966	ENSOCUG00000023554	R3HCC1	87	67.713	Oryctolagus_cuniculus
ENSEEUG00000011918	R3HCC1	68	42.473	ENSORLG00000016816	r3hcc1	72	45.695	Oryzias_latipes
ENSEEUG00000011918	R3HCC1	88	33.582	ENSORLG00020012005	r3hcc1	97	33.582	Oryzias_latipes_hni
ENSEEUG00000011918	R3HCC1	88	33.333	ENSORLG00015007018	r3hcc1	97	32.603	Oryzias_latipes_hsok
ENSEEUG00000011918	R3HCC1	88	33.007	ENSOMEG00000000816	r3hcc1	97	32.763	Oryzias_melastigma
ENSEEUG00000011918	R3HCC1	98	70.536	ENSOGAG00000001291	R3HCC1	94	70.536	Otolemur_garnettii
ENSEEUG00000011918	R3HCC1	98	72.646	ENSOARG00000010146	R3HCC1	98	72.870	Ovis_aries
ENSEEUG00000011918	R3HCC1	97	75.621	ENSPPAG00000033165	R3HCC1	100	75.455	Pan_paniscus
ENSEEUG00000011918	R3HCC1	96	76.310	ENSPPRG00000002522	R3HCC1	100	76.538	Panthera_pardus
ENSEEUG00000011918	R3HCC1	89	74.690	ENSPTIG00000011230	R3HCC1	95	75.188	Panthera_tigris_altaica
ENSEEUG00000011918	R3HCC1	97	76.524	ENSPTRG00000020076	R3HCC1	96	75.163	Pan_troglodytes
ENSEEUG00000011918	R3HCC1	99	74.074	ENSPANG00000000453	R3HCC1	96	74.728	Papio_anubis
ENSEEUG00000011918	R3HCC1	85	36.294	ENSPKIG00000014426	-	76	48.000	Paramormyrops_kingsleyae
ENSEEUG00000011918	R3HCC1	85	35.930	ENSPKIG00000020397	-	94	35.930	Paramormyrops_kingsleyae
ENSEEUG00000011918	R3HCC1	94	49.227	ENSPSIG00000017664	R3HCC1	97	47.495	Pelodiscus_sinensis
ENSEEUG00000011918	R3HCC1	96	62.526	ENSPEMG00000007118	R3hcc1	99	62.319	Peromyscus_maniculatus_bairdii
ENSEEUG00000011918	R3HCC1	87	52.941	ENSPCIG00000022718	-	83	53.563	Phascolarctos_cinereus
ENSEEUG00000011918	R3HCC1	93	35.698	ENSPFOG00000022301	r3hcc1	90	35.632	Poecilia_formosa
ENSEEUG00000011918	R3HCC1	93	34.318	ENSPLAG00000010794	r3hcc1	90	34.247	Poecilia_latipinna
ENSEEUG00000011918	R3HCC1	93	35.698	ENSPMEG00000022515	r3hcc1	90	35.632	Poecilia_mexicana
ENSEEUG00000011918	R3HCC1	93	36.156	ENSPREG00000000713	r3hcc1	90	34.676	Poecilia_reticulata
ENSEEUG00000011918	R3HCC1	89	74.877	ENSPPYG00000018436	R3HCC1	100	74.877	Pongo_abelii
ENSEEUG00000011918	R3HCC1	73	83.117	ENSPCAG00000012229	R3HCC1	72	83.117	Procavia_capensis
ENSEEUG00000011918	R3HCC1	96	75.626	ENSPCOG00000027554	R3HCC1	100	75.626	Propithecus_coquereli
ENSEEUG00000011918	R3HCC1	97	75.339	ENSPVAG00000009829	R3HCC1	96	75.339	Pteropus_vampyrus
ENSEEUG00000011918	R3HCC1	90	32.847	ENSPNAG00000023875	r3hcc1	99	33.172	Pygocentrus_nattereri
ENSEEUG00000011918	R3HCC1	96	61.963	ENSRNOG00000016777	AABR07018321.1	82	60.327	Rattus_norvegicus
ENSEEUG00000011918	R3HCC1	96	76.364	ENSRBIG00000028045	R3HCC1	100	76.364	Rhinopithecus_bieti
ENSEEUG00000011918	R3HCC1	99	74.946	ENSRROG00000031126	R3HCC1	100	70.387	Rhinopithecus_roxellana
ENSEEUG00000011918	R3HCC1	96	73.864	ENSSBOG00000022590	R3HCC1	100	73.864	Saimiri_boliviensis_boliviensis
ENSEEUG00000011918	R3HCC1	94	51.106	ENSSHAG00000016526	-	97	50.885	Sarcophilus_harrisii
ENSEEUG00000011918	R3HCC1	88	34.217	ENSSFOG00015013507	r3hcc1	98	34.988	Scleropages_formosus
ENSEEUG00000011918	R3HCC1	85	31.401	ENSSMAG00000008647	r3hcc1	94	31.401	Scophthalmus_maximus
ENSEEUG00000011918	R3HCC1	93	32.747	ENSSDUG00000022786	r3hcc1	97	33.040	Seriola_dumerili
ENSEEUG00000011918	R3HCC1	93	33.407	ENSSLDG00000019031	r3hcc1	97	33.480	Seriola_lalandi_dorsalis
ENSEEUG00000011918	R3HCC1	51	76.761	ENSSARG00000013514	-	53	76.761	Sorex_araneus
ENSEEUG00000011918	R3HCC1	90	32.648	ENSSPAG00000013497	r3hcc1	97	32.648	Stegastes_partitus
ENSEEUG00000011918	R3HCC1	98	76.404	ENSSSCG00000039915	-	94	76.854	Sus_scrofa
ENSEEUG00000011918	R3HCC1	96	70.345	ENSSSCG00000037347	-	89	70.575	Sus_scrofa
ENSEEUG00000011918	R3HCC1	92	32.243	ENSTRUG00000015880	r3hcc1	98	32.710	Takifugu_rubripes
ENSEEUG00000011918	R3HCC1	96	70.481	ENSTTRG00000012247	R3HCC1	96	70.481	Tursiops_truncatus
ENSEEUG00000011918	R3HCC1	95	76.279	ENSUAMG00000007344	R3HCC1	98	76.279	Ursus_americanus
ENSEEUG00000011918	R3HCC1	98	73.933	ENSVVUG00000005056	R3HCC1	97	73.602	Vulpes_vulpes
ENSEEUG00000011918	R3HCC1	90	34.368	ENSXCOG00000017626	r3hcc1	88	33.413	Xiphophorus_couchianus
ENSEEUG00000011918	R3HCC1	93	34.483	ENSXMAG00000018375	r3hcc1	91	33.500	Xiphophorus_maculatus