EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000012032 (Gene tree)
Gene ID: -
Gene Symbol: LSM10
Alias: -
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 372 bases
Position: chrscaffold_251967:3564-3935
Accession: 103109032
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000010947	LSM	PF01423.22	3.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000012003	LSM10-201	372	-	ENSEEUP00000010947	123 (aa)	XP_016041461	A0A1S3W509

Gene Model

Click here to download ENSEEUG00000012032's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000012032's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000012032	LSM10	58	30.986	ENSEEUG00000004987	SNRPD1	80	30.986

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000012032	LSM10	100	89.431	ENSG00000181817	LSM10	100	89.431	Homo_sapiens
ENSEEUG00000012032	LSM10	100	91.057	ENSAMEG00000019854	LSM10	100	91.057	Ailuropoda_melanoleuca
ENSEEUG00000012032	LSM10	94	67.241	ENSACIG00000015420	oscp1a	77	67.241	Amphilophus_citrinellus
ENSEEUG00000012032	LSM10	96	69.492	ENSAOCG00000015618	LSM10	98	69.492	Amphiprion_ocellaris
ENSEEUG00000012032	LSM10	96	69.492	ENSAOCG00000014654	-	98	69.492	Amphiprion_ocellaris
ENSEEUG00000012032	LSM10	90	67.568	ENSAOCG00000015607	LSM10	86	67.568	Amphiprion_ocellaris
ENSEEUG00000012032	LSM10	90	67.568	ENSAPEG00000021851	LSM10	86	67.568	Amphiprion_percula
ENSEEUG00000012032	LSM10	96	69.492	ENSAPEG00000021845	-	98	69.492	Amphiprion_percula
ENSEEUG00000012032	LSM10	94	63.793	ENSATEG00000006310	oscp1a	86	63.793	Anabas_testudineus
ENSEEUG00000012032	LSM10	100	66.667	ENSACAG00000001231	LSM10	100	66.667	Anolis_carolinensis
ENSEEUG00000012032	LSM10	98	90.000	ENSANAG00000031489	-	98	90.000	Aotus_nancymaae
ENSEEUG00000012032	LSM10	100	90.244	ENSANAG00000018759	-	100	90.244	Aotus_nancymaae
ENSEEUG00000012032	LSM10	96	66.102	ENSACLG00000004728	oscp1a	96	66.102	Astatotilapia_calliptera
ENSEEUG00000012032	LSM10	96	68.644	ENSAMXG00000025301	oscp1a	98	68.644	Astyanax_mexicanus
ENSEEUG00000012032	LSM10	98	91.667	ENSBTAG00000024096	LSM10	98	91.667	Bos_taurus
ENSEEUG00000012032	LSM10	100	89.431	ENSCJAG00000044880	LSM10	100	89.431	Callithrix_jacchus
ENSEEUG00000012032	LSM10	100	94.309	ENSCAFG00000003382	LSM10	100	94.309	Canis_familiaris
ENSEEUG00000012032	LSM10	100	94.309	ENSCAFG00020008920	LSM10	100	94.309	Canis_lupus_dingo
ENSEEUG00000012032	LSM10	98	91.667	ENSCHIG00000009398	LSM10	98	91.667	Capra_hircus
ENSEEUG00000012032	LSM10	100	90.244	ENSCAPG00000012567	LSM10	100	90.244	Cavia_aperea
ENSEEUG00000012032	LSM10	100	90.244	ENSCPOG00000039302	LSM10	100	90.244	Cavia_porcellus
ENSEEUG00000012032	LSM10	100	90.244	ENSCCAG00000018913	-	100	90.244	Cebus_capucinus
ENSEEUG00000012032	LSM10	98	90.000	ENSCCAG00000008378	-	98	90.000	Cebus_capucinus
ENSEEUG00000012032	LSM10	100	90.244	ENSCATG00000006589	LSM10	100	90.244	Cercocebus_atys
ENSEEUG00000012032	LSM10	100	92.683	ENSCLAG00000008633	LSM10	100	92.683	Chinchilla_lanigera
ENSEEUG00000012032	LSM10	100	90.244	ENSCSAG00000000134	LSM10	100	90.244	Chlorocebus_sabaeus
ENSEEUG00000012032	LSM10	100	89.600	ENSCHOG00000008615	LSM10	100	89.600	Choloepus_hoffmanni
ENSEEUG00000012032	LSM10	83	32.353	ENSCSAVG00000001896	-	87	32.353	Ciona_savignyi
ENSEEUG00000012032	LSM10	100	90.244	ENSCANG00000019928	LSM10	100	90.244	Colobus_angolensis_palliatus
ENSEEUG00000012032	LSM10	98	93.388	ENSCGRG00001004317	-	99	93.388	Cricetulus_griseus_chok1gshd
ENSEEUG00000012032	LSM10	93	83.761	ENSCGRG00001022673	-	94	83.761	Cricetulus_griseus_chok1gshd
ENSEEUG00000012032	LSM10	98	93.388	ENSCGRG00000014935	-	99	93.388	Cricetulus_griseus_crigri
ENSEEUG00000012032	LSM10	93	83.761	ENSCGRG00000015514	-	94	83.761	Cricetulus_griseus_crigri
ENSEEUG00000012032	LSM10	96	64.407	ENSCSEG00000010374	oscp1a	79	64.407	Cynoglossus_semilaevis
ENSEEUG00000012032	LSM10	97	66.387	ENSCVAG00000001536	oscp1a	90	66.387	Cyprinodon_variegatus
ENSEEUG00000012032	LSM10	69	71.765	ENSDARG00000109563	CABZ01074453.1	99	71.765	Danio_rerio
ENSEEUG00000012032	LSM10	98	71.074	ENSDARG00000101222	oscp1a	100	71.074	Danio_rerio
ENSEEUG00000012032	LSM10	99	93.443	ENSDNOG00000036662	LSM10	99	93.443	Dasypus_novemcinctus
ENSEEUG00000012032	LSM10	100	91.870	ENSDORG00000007579	Lsm10	100	91.870	Dipodomys_ordii
ENSEEUG00000012032	LSM10	100	89.431	ENSETEG00000005703	LSM10	100	89.431	Echinops_telfairi
ENSEEUG00000012032	LSM10	95	51.282	ENSEBUG00000001312	oscp1a	96	51.282	Eptatretus_burgeri
ENSEEUG00000012032	LSM10	100	94.309	ENSEASG00005012194	LSM10	100	94.309	Equus_asinus_asinus
ENSEEUG00000012032	LSM10	100	95.122	ENSECAG00000005071	LSM10	100	95.122	Equus_caballus
ENSEEUG00000012032	LSM10	98	67.769	ENSELUG00000007452	oscp1a	99	67.769	Esox_lucius
ENSEEUG00000012032	LSM10	100	70.732	ENSFALG00000000851	LSM10	100	70.732	Ficedula_albicollis
ENSEEUG00000012032	LSM10	100	89.431	ENSFDAG00000021056	LSM10	100	89.431	Fukomys_damarensis
ENSEEUG00000012032	LSM10	89	68.182	ENSFHEG00000001058	oscp1a	95	68.182	Fundulus_heteroclitus
ENSEEUG00000012032	LSM10	86	66.981	ENSGMOG00000019832	oscp1a	89	66.981	Gadus_morhua
ENSEEUG00000012032	LSM10	100	73.984	ENSGALG00000002127	LSM10	100	73.984	Gallus_gallus
ENSEEUG00000012032	LSM10	91	62.609	ENSGAFG00000016445	oscp1a	93	62.609	Gambusia_affinis
ENSEEUG00000012032	LSM10	96	65.254	ENSGACG00000002329	oscp1a	97	65.254	Gasterosteus_aculeatus
ENSEEUG00000012032	LSM10	100	72.358	ENSGAGG00000024848	LSM10	100	72.358	Gopherus_agassizii
ENSEEUG00000012032	LSM10	100	90.244	ENSGGOG00000003556	LSM10	100	90.244	Gorilla_gorilla
ENSEEUG00000012032	LSM10	96	66.102	ENSHBUG00000001722	oscp1a	96	66.102	Haplochromis_burtoni
ENSEEUG00000012032	LSM10	100	90.244	ENSHGLG00000011625	LSM10	100	90.244	Heterocephalus_glaber_female
ENSEEUG00000012032	LSM10	100	90.244	ENSHGLG00100001769	LSM10	100	90.244	Heterocephalus_glaber_male
ENSEEUG00000012032	LSM10	85	70.476	ENSIPUG00000005808	oscp1a	91	70.476	Ictalurus_punctatus
ENSEEUG00000012032	LSM10	100	94.309	ENSSTOG00000000606	LSM10	100	94.309	Ictidomys_tridecemlineatus
ENSEEUG00000012032	LSM10	98	66.116	ENSKMAG00000012143	oscp1a	99	66.116	Kryptolebias_marmoratus
ENSEEUG00000012032	LSM10	98	63.333	ENSLBEG00000017764	oscp1a	98	63.333	Labrus_bergylta
ENSEEUG00000012032	LSM10	100	74.797	ENSLACG00000015904	LSM10	95	74.797	Latimeria_chalumnae
ENSEEUG00000012032	LSM10	98	70.000	ENSLOCG00000018277	oscp1a	98	70.000	Lepisosteus_oculatus
ENSEEUG00000012032	LSM10	100	92.683	ENSLAFG00000009600	LSM10	100	92.683	Loxodonta_africana
ENSEEUG00000012032	LSM10	100	90.244	ENSMFAG00000009115	LSM10	100	90.244	Macaca_fascicularis
ENSEEUG00000012032	LSM10	100	90.244	ENSMMUG00000017338	LSM10	100	90.244	Macaca_mulatta
ENSEEUG00000012032	LSM10	100	90.244	ENSMNEG00000020023	LSM10	100	90.244	Macaca_nemestrina
ENSEEUG00000012032	LSM10	100	90.244	ENSMLEG00000025150	LSM10	100	90.244	Mandrillus_leucophaeus
ENSEEUG00000012032	LSM10	98	65.833	ENSMAMG00000004427	oscp1a	98	65.833	Mastacembelus_armatus
ENSEEUG00000012032	LSM10	96	66.102	ENSMZEG00005026307	oscp1a	96	66.102	Maylandia_zebra
ENSEEUG00000012032	LSM10	100	73.171	ENSMGAG00000015707	LSM10	100	73.171	Meleagris_gallopavo
ENSEEUG00000012032	LSM10	98	90.909	ENSMAUG00000016624	Lsm10	99	90.909	Mesocricetus_auratus
ENSEEUG00000012032	LSM10	98	91.736	ENSMOCG00000021943	Lsm10	99	91.736	Microtus_ochrogaster
ENSEEUG00000012032	LSM10	90	68.468	ENSMMOG00000013597	oscp1a	83	68.468	Mola_mola
ENSEEUG00000012032	LSM10	100	82.927	ENSMODG00000023328	LSM10	100	82.927	Monodelphis_domestica
ENSEEUG00000012032	LSM10	58	59.211	ENSMALG00000012661	oscp1a	60	59.211	Monopterus_albus
ENSEEUG00000012032	LSM10	98	91.736	MGP_CAROLIEiJ_G0026467	Lsm10	100	92.473	Mus_caroli
ENSEEUG00000012032	LSM10	98	92.562	ENSMUSG00000050188	Lsm10	100	93.548	Mus_musculus
ENSEEUG00000012032	LSM10	98	92.562	MGP_PahariEiJ_G0028798	Lsm10	100	93.548	Mus_pahari
ENSEEUG00000012032	LSM10	98	92.562	MGP_SPRETEiJ_G0027446	Lsm10	100	93.548	Mus_spretus
ENSEEUG00000012032	LSM10	100	94.309	ENSMPUG00000018593	LSM10	100	94.309	Mustela_putorius_furo
ENSEEUG00000012032	LSM10	100	88.618	ENSMLUG00000023895	LSM10	100	88.618	Myotis_lucifugus
ENSEEUG00000012032	LSM10	100	91.870	ENSNGAG00000015011	Lsm10	100	91.870	Nannospalax_galili
ENSEEUG00000012032	LSM10	96	66.949	ENSNBRG00000014306	oscp1a	96	66.949	Neolamprologus_brichardi
ENSEEUG00000012032	LSM10	100	91.057	ENSNLEG00000033754	LSM10	100	91.057	Nomascus_leucogenys
ENSEEUG00000012032	LSM10	100	82.927	ENSMEUG00000006313	LSM10	100	82.927	Notamacropus_eugenii
ENSEEUG00000012032	LSM10	100	88.618	ENSOPRG00000001699	LSM10	100	88.618	Ochotona_princeps
ENSEEUG00000012032	LSM10	100	92.683	ENSODEG00000019161	LSM10	100	92.683	Octodon_degus
ENSEEUG00000012032	LSM10	98	65.833	ENSONIG00000020904	oscp1a	98	65.833	Oreochromis_niloticus
ENSEEUG00000012032	LSM10	100	77.236	ENSOANG00000002066	LSM10	100	77.236	Ornithorhynchus_anatinus
ENSEEUG00000012032	LSM10	100	87.805	ENSOCUG00000005333	LSM10	100	87.805	Oryctolagus_cuniculus
ENSEEUG00000012032	LSM10	97	65.546	ENSORLG00000009504	oscp1a	98	65.546	Oryzias_latipes
ENSEEUG00000012032	LSM10	97	65.546	ENSORLG00020016201	oscp1a	98	65.546	Oryzias_latipes_hni
ENSEEUG00000012032	LSM10	97	65.546	ENSORLG00015007794	oscp1a	98	65.546	Oryzias_latipes_hsok
ENSEEUG00000012032	LSM10	100	91.870	ENSOGAG00000002653	LSM10	100	91.870	Otolemur_garnettii
ENSEEUG00000012032	LSM10	98	91.667	ENSOARG00000009596	LSM10	98	91.667	Ovis_aries
ENSEEUG00000012032	LSM10	100	89.431	ENSPPAG00000023465	LSM10	100	89.431	Pan_paniscus
ENSEEUG00000012032	LSM10	100	95.935	ENSPPRG00000014619	LSM10	100	95.935	Panthera_pardus
ENSEEUG00000012032	LSM10	100	95.935	ENSPTIG00000004613	LSM10	100	95.935	Panthera_tigris_altaica
ENSEEUG00000012032	LSM10	100	89.431	ENSPTRG00000000539	LSM10	100	89.431	Pan_troglodytes
ENSEEUG00000012032	LSM10	100	90.244	ENSPANG00000023172	LSM10	100	90.244	Papio_anubis
ENSEEUG00000012032	LSM10	98	66.667	ENSPKIG00000003728	oscp1a	97	66.667	Paramormyrops_kingsleyae
ENSEEUG00000012032	LSM10	100	72.358	ENSPSIG00000000590	LSM10	100	72.358	Pelodiscus_sinensis
ENSEEUG00000012032	LSM10	62	65.789	ENSPMGG00000015718	oscp1a	99	65.789	Periophthalmus_magnuspinnatus
ENSEEUG00000012032	LSM10	84	83.495	ENSPCIG00000014865	LSM10	76	83.495	Phascolarctos_cinereus
ENSEEUG00000012032	LSM10	91	68.750	ENSPFOG00000020490	oscp1a	95	68.750	Poecilia_formosa
ENSEEUG00000012032	LSM10	91	68.750	ENSPLAG00000016537	oscp1a	85	68.750	Poecilia_latipinna
ENSEEUG00000012032	LSM10	88	69.444	ENSPMEG00000000174	oscp1a	94	69.444	Poecilia_mexicana
ENSEEUG00000012032	LSM10	91	67.857	ENSPREG00000009899	oscp1a	85	67.857	Poecilia_reticulata
ENSEEUG00000012032	LSM10	100	90.244	ENSPPYG00000001539	LSM10	100	90.244	Pongo_abelii
ENSEEUG00000012032	LSM10	100	90.244	ENSPCAG00000002520	LSM10	100	90.244	Procavia_capensis
ENSEEUG00000012032	LSM10	100	90.244	ENSPVAG00000008644	LSM10	100	90.244	Pteropus_vampyrus
ENSEEUG00000012032	LSM10	96	66.102	ENSPNYG00000003138	oscp1a	96	66.102	Pundamilia_nyererei
ENSEEUG00000012032	LSM10	95	67.521	ENSPNAG00000028829	oscp1a	97	67.521	Pygocentrus_nattereri
ENSEEUG00000012032	LSM10	98	93.388	ENSRNOG00000025716	Lsm10	99	93.388	Rattus_norvegicus
ENSEEUG00000012032	LSM10	100	90.244	ENSRBIG00000001561	LSM10	100	90.244	Rhinopithecus_bieti
ENSEEUG00000012032	LSM10	100	90.244	ENSRROG00000011414	LSM10	100	90.244	Rhinopithecus_roxellana
ENSEEUG00000012032	LSM10	100	90.244	ENSSBOG00000036413	-	100	90.244	Saimiri_boliviensis_boliviensis
ENSEEUG00000012032	LSM10	100	82.927	ENSSHAG00000018056	LSM10	100	82.927	Sarcophilus_harrisii
ENSEEUG00000012032	LSM10	98	66.116	ENSSFOG00015019954	lsm10	99	66.116	Scleropages_formosus
ENSEEUG00000012032	LSM10	93	67.826	ENSSMAG00000001297	oscp1a	98	67.826	Scophthalmus_maximus
ENSEEUG00000012032	LSM10	98	63.636	ENSSDUG00000007090	oscp1a	98	63.636	Seriola_dumerili
ENSEEUG00000012032	LSM10	94	64.655	ENSSLDG00000000800	oscp1a	96	64.655	Seriola_lalandi_dorsalis
ENSEEUG00000012032	LSM10	100	92.000	ENSSARG00000004211	LSM10	100	92.800	Sorex_araneus
ENSEEUG00000012032	LSM10	94	67.241	ENSSPAG00000009229	oscp1a	96	67.241	Stegastes_partitus
ENSEEUG00000012032	LSM10	100	90.244	ENSSSCG00000038916	LSM10	100	90.244	Sus_scrofa
ENSEEUG00000012032	LSM10	99	71.311	ENSTGUG00000001602	-	100	71.311	Taeniopygia_guttata
ENSEEUG00000012032	LSM10	99	71.311	ENSTGUG00000001600	-	100	71.311	Taeniopygia_guttata
ENSEEUG00000012032	LSM10	97	68.067	ENSTRUG00000010531	oscp1a	96	68.067	Takifugu_rubripes
ENSEEUG00000012032	LSM10	100	91.057	ENSTBEG00000016674	LSM10	100	91.057	Tupaia_belangeri
ENSEEUG00000012032	LSM10	100	91.870	ENSUAMG00000020265	LSM10	100	91.870	Ursus_americanus
ENSEEUG00000012032	LSM10	100	91.870	ENSUMAG00000001438	LSM10	57	91.870	Ursus_maritimus
ENSEEUG00000012032	LSM10	100	94.309	ENSVVUG00000023209	LSM10	100	94.309	Vulpes_vulpes
ENSEEUG00000012032	LSM10	100	69.919	ENSXETG00000027631	lsm10	100	69.919	Xenopus_tropicalis
ENSEEUG00000012032	LSM10	96	62.400	ENSXCOG00000018776	oscp1a	79	62.400	Xiphophorus_couchianus
ENSEEUG00000012032	LSM10	88	67.593	ENSXMAG00000019963	oscp1a	86	67.593	Xiphophorus_maculatus