EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000012135 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 6971 bases
Position: chrGeneScaffold_8578:60129-67099
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000011064	RNase_T	PF00929.24	2.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000012129	-	978	-	ENSEEUP00000011064	325 (aa)	-	UPI0000F63E9C

Gene Model

Click here to download ENSEEUG00000012135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000012135's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000012135	-	53	44.068	ENSEEUG00000007015	AEN	64	44.068

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000012135	-	100	61.212	ENSG00000148300	REXO4	69	88.372	Homo_sapiens
ENSEEUG00000012135	-	98	63.208	ENSAMEG00000011649	REXO4	76	62.264	Ailuropoda_melanoleuca
ENSEEUG00000012135	-	52	74.556	ENSAPLG00000005865	REXO4	51	74.556	Anas_platyrhynchos
ENSEEUG00000012135	-	82	79.006	ENSBTAG00000019721	REXO4	64	79.006	Bos_taurus
ENSEEUG00000012135	-	100	58.485	ENSCJAG00000009774	REXO4	64	85.246	Callithrix_jacchus
ENSEEUG00000012135	-	98	63.863	ENSCAFG00000019767	REXO4	78	62.382	Canis_familiaris
ENSEEUG00000012135	-	98	63.863	ENSCAFG00020000983	-	75	62.382	Canis_lupus_dingo
ENSEEUG00000012135	-	82	80.110	ENSCHIG00000009517	REXO4	64	80.110	Capra_hircus
ENSEEUG00000012135	-	100	60.486	ENSTSYG00000027492	REXO4	65	84.699	Carlito_syrichta
ENSEEUG00000012135	-	55	82.967	ENSCAPG00000014583	REXO4	78	82.967	Cavia_aperea
ENSEEUG00000012135	-	100	52.424	ENSCCAG00000027049	REXO4	62	71.585	Cebus_capucinus
ENSEEUG00000012135	-	99	59.574	ENSCATG00000028646	REXO4	64	84.615	Cercocebus_atys
ENSEEUG00000012135	-	100	60.486	ENSCLAG00000006919	REXO4	82	82.514	Chinchilla_lanigera
ENSEEUG00000012135	-	99	60.671	ENSCSAG00000015280	REXO4	64	85.083	Chlorocebus_sabaeus
ENSEEUG00000012135	-	51	64.458	ENSCING00000010751	-	65	64.458	Ciona_intestinalis
ENSEEUG00000012135	-	99	60.486	ENSCANG00000029855	REXO4	64	85.165	Colobus_angolensis_palliatus
ENSEEUG00000012135	-	52	68.824	ENSDARG00000088619	rexo4	63	68.824	Danio_rerio
ENSEEUG00000012135	-	98	61.321	ENSDORG00000006190	Rexo4	76	83.815	Dipodomys_ordii
ENSEEUG00000012135	-	52	52.941	FBgn0036405	CG6833	59	52.941	Drosophila_melanogaster
ENSEEUG00000012135	-	75	51.639	ENSEASG00005009915	-	59	88.660	Equus_asinus_asinus
ENSEEUG00000012135	-	98	60.063	ENSECAG00000007896	REXO4	56	88.304	Equus_caballus
ENSEEUG00000012135	-	98	60.063	ENSFCAG00000011652	REXO4	72	57.233	Felis_catus
ENSEEUG00000012135	-	100	61.094	ENSFDAG00000016050	REXO4	78	59.878	Fukomys_damarensis
ENSEEUG00000012135	-	50	57.927	ENSGMOG00000012876	rexo4	50	57.927	Gadus_morhua
ENSEEUG00000012135	-	50	76.074	ENSGALG00000030609	REXO4	95	76.074	Gallus_gallus
ENSEEUG00000012135	-	100	61.212	ENSGGOG00000014508	REXO4	64	85.792	Gorilla_gorilla
ENSEEUG00000012135	-	100	60.182	ENSHGLG00000016901	REXO4	78	58.055	Heterocephalus_glaber_female
ENSEEUG00000012135	-	100	60.182	ENSHGLG00100017444	REXO4	78	58.055	Heterocephalus_glaber_male
ENSEEUG00000012135	-	98	63.323	ENSSTOG00000003754	REXO4	75	60.188	Ictidomys_tridecemlineatus
ENSEEUG00000012135	-	98	59.561	ENSJJAG00000013002	Rexo4	58	84.971	Jaculus_jaculus
ENSEEUG00000012135	-	99	59.271	ENSMNEG00000031604	REXO4	64	85.714	Macaca_nemestrina
ENSEEUG00000012135	-	99	59.878	ENSMLEG00000037716	REXO4	64	85.165	Mandrillus_leucophaeus
ENSEEUG00000012135	-	97	58.413	ENSMAUG00000015137	Rexo4	60	84.211	Mesocricetus_auratus
ENSEEUG00000012135	-	98	60.938	ENSMICG00000008422	REXO4	62	83.815	Microcebus_murinus
ENSEEUG00000012135	-	98	58.360	MGP_CAROLIEiJ_G0023332	-	63	84.393	Mus_caroli
ENSEEUG00000012135	-	100	60.303	ENSNLEG00000013130	-	64	84.153	Nomascus_leucogenys
ENSEEUG00000012135	-	100	57.879	ENSNLEG00000007556	-	67	80.328	Nomascus_leucogenys
ENSEEUG00000012135	-	99	58.841	ENSODEG00000015721	REXO4	94	56.707	Octodon_degus
ENSEEUG00000012135	-	53	84.971	ENSOGAG00000014040	REXO4	62	84.971	Otolemur_garnettii
ENSEEUG00000012135	-	100	60.606	ENSPPAG00000027911	REXO4	64	85.792	Pan_paniscus
ENSEEUG00000012135	-	97	60.568	ENSPPRG00000002894	REXO4	76	58.360	Panthera_pardus
ENSEEUG00000012135	-	97	62.461	ENSPTIG00000012007	REXO4	70	88.304	Panthera_tigris_altaica
ENSEEUG00000012135	-	100	60.909	ENSPTRG00000023363	REXO4	64	85.792	Pan_troglodytes
ENSEEUG00000012135	-	99	59.878	ENSPANG00000026040	REXO4	64	85.165	Papio_anubis
ENSEEUG00000012135	-	100	60.606	ENSPPYG00000019735	REXO4	64	84.699	Pongo_abelii
ENSEEUG00000012135	-	100	59.394	ENSPCOG00000025466	REXO4	64	80.328	Propithecus_coquereli
ENSEEUG00000012135	-	98	52.201	ENSPVAG00000001429	REXO4	75	52.201	Pteropus_vampyrus
ENSEEUG00000012135	-	97	56.329	ENSRNOG00000027867	Rexo4	62	81.503	Rattus_norvegicus
ENSEEUG00000012135	-	99	60.182	ENSRBIG00000037515	REXO4	64	84.615	Rhinopithecus_bieti
ENSEEUG00000012135	-	99	59.878	ENSRROG00000028864	REXO4	64	84.066	Rhinopithecus_roxellana
ENSEEUG00000012135	-	50	50.617	YOL080C	-	56	50.617	Saccharomyces_cerevisiae
ENSEEUG00000012135	-	100	45.758	ENSSBOG00000032587	REXO4	59	59.016	Saimiri_boliviensis_boliviensis
ENSEEUG00000012135	-	98	58.438	ENSSSCG00000023173	REXO4	75	55.937	Sus_scrofa
ENSEEUG00000012135	-	79	83.432	ENSTTRG00000007681	-	74	83.432	Tursiops_truncatus
ENSEEUG00000012135	-	98	63.208	ENSUAMG00000018676	REXO4	74	61.635	Ursus_americanus
ENSEEUG00000012135	-	98	58.491	ENSUMAG00000023164	REXO4	69	91.216	Ursus_maritimus
ENSEEUG00000012135	-	98	64.174	ENSVVUG00000027337	REXO4	75	62.696	Vulpes_vulpes