EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000012178 (Gene tree)
Gene ID: -
Gene Symbol: SNRNP200
Alias: ASCC3L1|BRR2|HELIC2|KIAA0788|RP33|U5-200KD
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 72688 bases
Position: chrGeneScaffold_3970:36162-108849
Accession: 30859
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000011188	ResIII	PF04851.15	4.7e-26	1	2
ENSEEUP00000011188	ResIII	PF04851.15	4.7e-26	2	2
ENSEEUP00000011188	DEAD	PF00270.29	1.4e-52	1	2
ENSEEUP00000011188	DEAD	PF00270.29	1.4e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000012264	SNRNP200-201	6054	-	ENSEEUP00000011188	2018 (aa)	-	UPI0000F63821

Gene Model

Click here to download ENSEEUG00000012178's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000012178's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000012178	SNRNP200	78	42.821	ENSEEUG00000009748	ASCC3	81	42.821

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000012178	SNRNP200	93	100.000	ENSG00000144028	SNRNP200	98	98.632	Homo_sapiens
ENSEEUG00000012178	SNRNP200	93	100.000	ENSAPOG00000010223	snrnp200	88	100.000	Acanthochromis_polyacanthus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSAMEG00000008996	SNRNP200	88	100.000	Ailuropoda_melanoleuca
ENSEEUG00000012178	SNRNP200	89	89.013	ENSACIG00000001764	snrnp200	90	88.934	Amphilophus_citrinellus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSAOCG00000024593	snrnp200	88	100.000	Amphiprion_ocellaris
ENSEEUG00000012178	SNRNP200	89	88.726	ENSAPEG00000012554	snrnp200	91	88.759	Amphiprion_percula
ENSEEUG00000012178	SNRNP200	93	100.000	ENSATEG00000022522	snrnp200	88	100.000	Anabas_testudineus
ENSEEUG00000012178	SNRNP200	91	96.148	ENSAPLG00000004313	SNRNP200	87	96.158	Anas_platyrhynchos
ENSEEUG00000012178	SNRNP200	91	100.000	ENSACAG00000000434	SNRNP200	90	100.000	Anolis_carolinensis
ENSEEUG00000012178	SNRNP200	93	100.000	ENSANAG00000036625	SNRNP200	90	100.000	Aotus_nancymaae
ENSEEUG00000012178	SNRNP200	93	100.000	ENSACLG00000011188	snrnp200	88	100.000	Astatotilapia_calliptera
ENSEEUG00000012178	SNRNP200	93	100.000	ENSAMXG00000005684	snrnp200	88	100.000	Astyanax_mexicanus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSBTAG00000000848	SNRNP200	88	100.000	Bos_taurus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSCJAG00000007514	SNRNP200	88	100.000	Callithrix_jacchus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSCAFG00020019979	SNRNP200	95	98.166	Canis_lupus_dingo
ENSEEUG00000012178	SNRNP200	93	100.000	ENSCHIG00000020611	SNRNP200	88	100.000	Capra_hircus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSTSYG00000010467	SNRNP200	88	100.000	Carlito_syrichta
ENSEEUG00000012178	SNRNP200	91	97.733	ENSCAPG00000017234	SNRNP200	87	97.733	Cavia_aperea
ENSEEUG00000012178	SNRNP200	93	100.000	ENSCPOG00000006776	SNRNP200	88	100.000	Cavia_porcellus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSCCAG00000033962	SNRNP200	88	100.000	Cebus_capucinus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSCATG00000015790	SNRNP200	88	100.000	Cercocebus_atys
ENSEEUG00000012178	SNRNP200	93	100.000	ENSCLAG00000004116	SNRNP200	88	100.000	Chinchilla_lanigera
ENSEEUG00000012178	SNRNP200	93	100.000	ENSCSAG00000017369	SNRNP200	88	100.000	Chlorocebus_sabaeus
ENSEEUG00000012178	SNRNP200	73	98.396	ENSCHOG00000012981	-	53	98.396	Choloepus_hoffmanni
ENSEEUG00000012178	SNRNP200	93	100.000	ENSCPBG00000022571	SNRNP200	91	100.000	Chrysemys_picta_bellii
ENSEEUG00000012178	SNRNP200	93	87.879	ENSCING00000005082	-	88	87.879	Ciona_intestinalis
ENSEEUG00000012178	SNRNP200	93	100.000	ENSCANG00000033932	SNRNP200	93	100.000	Colobus_angolensis_palliatus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSCGRG00001022610	Snrnp200	88	100.000	Cricetulus_griseus_chok1gshd
ENSEEUG00000012178	SNRNP200	93	100.000	ENSCGRG00000016472	Snrnp200	88	100.000	Cricetulus_griseus_crigri
ENSEEUG00000012178	SNRNP200	93	100.000	ENSCSEG00000016399	snrnp200	91	100.000	Cynoglossus_semilaevis
ENSEEUG00000012178	SNRNP200	93	96.970	ENSCVAG00000017631	snrnp200	91	96.970	Cyprinodon_variegatus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSDARG00000077536	snrnp200	88	100.000	Danio_rerio
ENSEEUG00000012178	SNRNP200	93	100.000	ENSDNOG00000011227	SNRNP200	88	100.000	Dasypus_novemcinctus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSDORG00000005861	Snrnp200	89	100.000	Dipodomys_ordii
ENSEEUG00000012178	SNRNP200	93	78.788	FBgn0263599	l(3)72Ab	88	78.788	Drosophila_melanogaster
ENSEEUG00000012178	SNRNP200	88	100.000	ENSETEG00000000162	SNRNP200	62	100.000	Echinops_telfairi
ENSEEUG00000012178	SNRNP200	83	79.462	ENSEBUG00000016524	snrnp200	95	79.462	Eptatretus_burgeri
ENSEEUG00000012178	SNRNP200	93	100.000	ENSEASG00005001884	SNRNP200	88	100.000	Equus_asinus_asinus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSECAG00000019675	SNRNP200	91	100.000	Equus_caballus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSELUG00000018948	snrnp200	88	100.000	Esox_lucius
ENSEEUG00000012178	SNRNP200	93	100.000	ENSFCAG00000010699	SNRNP200	91	100.000	Felis_catus
ENSEEUG00000012178	SNRNP200	89	88.570	ENSFALG00000001368	-	86	88.570	Ficedula_albicollis
ENSEEUG00000012178	SNRNP200	93	100.000	ENSFDAG00000004683	SNRNP200	88	100.000	Fukomys_damarensis
ENSEEUG00000012178	SNRNP200	93	96.970	ENSFHEG00000003786	snrnp200	91	96.970	Fundulus_heteroclitus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSGMOG00000004881	snrnp200	88	100.000	Gadus_morhua
ENSEEUG00000012178	SNRNP200	93	96.970	ENSGAFG00000010807	snrnp200	91	96.970	Gambusia_affinis
ENSEEUG00000012178	SNRNP200	93	100.000	ENSGACG00000011474	snrnp200	88	100.000	Gasterosteus_aculeatus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSGAGG00000016069	SNRNP200	95	100.000	Gopherus_agassizii
ENSEEUG00000012178	SNRNP200	93	100.000	ENSGGOG00000005174	SNRNP200	95	99.405	Gorilla_gorilla
ENSEEUG00000012178	SNRNP200	89	86.300	ENSHBUG00000011322	snrnp200	91	86.231	Haplochromis_burtoni
ENSEEUG00000012178	SNRNP200	93	100.000	ENSHGLG00000006654	SNRNP200	88	100.000	Heterocephalus_glaber_female
ENSEEUG00000012178	SNRNP200	93	100.000	ENSHGLG00100018594	SNRNP200	88	100.000	Heterocephalus_glaber_male
ENSEEUG00000012178	SNRNP200	93	100.000	ENSSTOG00000016351	SNRNP200	88	100.000	Ictidomys_tridecemlineatus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSJJAG00000023659	Snrnp200	88	100.000	Jaculus_jaculus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSKMAG00000003665	snrnp200	91	100.000	Kryptolebias_marmoratus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSLBEG00000021585	snrnp200	88	100.000	Labrus_bergylta
ENSEEUG00000012178	SNRNP200	83	93.058	ENSLACG00000000226	SNRNP200	95	93.514	Latimeria_chalumnae
ENSEEUG00000012178	SNRNP200	93	100.000	ENSLOCG00000015198	snrnp200	88	100.000	Lepisosteus_oculatus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSLAFG00000015626	SNRNP200	88	100.000	Loxodonta_africana
ENSEEUG00000012178	SNRNP200	93	100.000	ENSMFAG00000040174	SNRNP200	99	99.123	Macaca_fascicularis
ENSEEUG00000012178	SNRNP200	93	100.000	ENSMMUG00000023261	SNRNP200	88	100.000	Macaca_mulatta
ENSEEUG00000012178	SNRNP200	93	100.000	ENSMNEG00000032398	SNRNP200	88	100.000	Macaca_nemestrina
ENSEEUG00000012178	SNRNP200	93	100.000	ENSMLEG00000019083	SNRNP200	99	99.123	Mandrillus_leucophaeus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSMAMG00000007851	snrnp200	88	100.000	Mastacembelus_armatus
ENSEEUG00000012178	SNRNP200	89	86.300	ENSMZEG00005010787	snrnp200	91	86.231	Maylandia_zebra
ENSEEUG00000012178	SNRNP200	91	95.822	ENSMGAG00000001831	SNRNP200	89	95.833	Meleagris_gallopavo
ENSEEUG00000012178	SNRNP200	93	100.000	ENSMAUG00000011825	Snrnp200	88	100.000	Mesocricetus_auratus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSMICG00000004710	SNRNP200	98	98.873	Microcebus_murinus
ENSEEUG00000012178	SNRNP200	91	100.000	ENSMOCG00000011814	Snrnp200	88	100.000	Microtus_ochrogaster
ENSEEUG00000012178	SNRNP200	93	100.000	ENSMMOG00000014167	snrnp200	88	100.000	Mola_mola
ENSEEUG00000012178	SNRNP200	93	100.000	ENSMODG00000008475	SNRNP200	88	100.000	Monodelphis_domestica
ENSEEUG00000012178	SNRNP200	93	100.000	ENSMALG00000001973	snrnp200	88	100.000	Monopterus_albus
ENSEEUG00000012178	SNRNP200	93	100.000	MGP_CAROLIEiJ_G0024250	Snrnp200	88	100.000	Mus_caroli
ENSEEUG00000012178	SNRNP200	93	100.000	ENSMUSG00000003660	Snrnp200	88	100.000	Mus_musculus
ENSEEUG00000012178	SNRNP200	93	100.000	MGP_PahariEiJ_G0025695	Snrnp200	88	100.000	Mus_pahari
ENSEEUG00000012178	SNRNP200	93	100.000	MGP_SPRETEiJ_G0025170	Snrnp200	91	100.000	Mus_spretus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSMPUG00000008949	SNRNP200	88	100.000	Mustela_putorius_furo
ENSEEUG00000012178	SNRNP200	93	100.000	ENSMLUG00000010493	SNRNP200	88	100.000	Myotis_lucifugus
ENSEEUG00000012178	SNRNP200	93	94.086	ENSMLUG00000027511	-	88	94.102	Myotis_lucifugus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSNGAG00000021993	Snrnp200	88	100.000	Nannospalax_galili
ENSEEUG00000012178	SNRNP200	89	89.072	ENSNBRG00000017960	snrnp200	97	88.993	Neolamprologus_brichardi
ENSEEUG00000012178	SNRNP200	93	100.000	ENSNLEG00000000025	SNRNP200	92	100.000	Nomascus_leucogenys
ENSEEUG00000012178	SNRNP200	91	100.000	ENSMEUG00000010532	SNRNP200	67	100.000	Notamacropus_eugenii
ENSEEUG00000012178	SNRNP200	91	96.699	ENSOPRG00000015464	SNRNP200	87	96.699	Ochotona_princeps
ENSEEUG00000012178	SNRNP200	93	100.000	ENSODEG00000008366	SNRNP200	88	100.000	Octodon_degus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSONIG00000010714	snrnp200	88	100.000	Oreochromis_niloticus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSOCUG00000009864	SNRNP200	88	100.000	Oryctolagus_cuniculus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSORLG00000012286	snrnp200	88	100.000	Oryzias_latipes
ENSEEUG00000012178	SNRNP200	93	100.000	ENSORLG00020004648	snrnp200	88	100.000	Oryzias_latipes_hni
ENSEEUG00000012178	SNRNP200	93	100.000	ENSORLG00015019114	snrnp200	88	100.000	Oryzias_latipes_hsok
ENSEEUG00000012178	SNRNP200	93	100.000	ENSOMEG00000011834	snrnp200	88	100.000	Oryzias_melastigma
ENSEEUG00000012178	SNRNP200	93	100.000	ENSOGAG00000006879	SNRNP200	88	100.000	Otolemur_garnettii
ENSEEUG00000012178	SNRNP200	93	100.000	ENSOARG00000013949	SNRNP200	88	100.000	Ovis_aries
ENSEEUG00000012178	SNRNP200	93	100.000	ENSPPAG00000041559	SNRNP200	91	100.000	Pan_paniscus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSPPRG00000004435	SNRNP200	88	100.000	Panthera_pardus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSPTIG00000006380	SNRNP200	88	100.000	Panthera_tigris_altaica
ENSEEUG00000012178	SNRNP200	93	100.000	ENSPTRG00000012230	SNRNP200	91	100.000	Pan_troglodytes
ENSEEUG00000012178	SNRNP200	93	100.000	ENSPANG00000006017	SNRNP200	88	100.000	Papio_anubis
ENSEEUG00000012178	SNRNP200	93	100.000	ENSPKIG00000014762	snrnp200	91	100.000	Paramormyrops_kingsleyae
ENSEEUG00000012178	SNRNP200	93	100.000	ENSPSIG00000008580	SNRNP200	88	100.000	Pelodiscus_sinensis
ENSEEUG00000012178	SNRNP200	93	100.000	ENSPCIG00000023050	SNRNP200	88	100.000	Phascolarctos_cinereus
ENSEEUG00000012178	SNRNP200	93	96.970	ENSPFOG00000015110	snrnp200	88	96.970	Poecilia_formosa
ENSEEUG00000012178	SNRNP200	89	88.882	ENSPLAG00000006711	snrnp200	90	88.862	Poecilia_latipinna
ENSEEUG00000012178	SNRNP200	89	88.822	ENSPMEG00000021166	snrnp200	90	88.802	Poecilia_mexicana
ENSEEUG00000012178	SNRNP200	93	96.970	ENSPREG00000008875	snrnp200	91	96.970	Poecilia_reticulata
ENSEEUG00000012178	SNRNP200	93	100.000	ENSPPYG00000012068	SNRNP200	88	100.000	Pongo_abelii
ENSEEUG00000012178	SNRNP200	89	99.138	ENSPCAG00000008536	SNRNP200	79	99.138	Procavia_capensis
ENSEEUG00000012178	SNRNP200	93	100.000	ENSPCOG00000024608	SNRNP200	88	100.000	Propithecus_coquereli
ENSEEUG00000012178	SNRNP200	89	100.000	ENSPVAG00000005860	SNRNP200	84	100.000	Pteropus_vampyrus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSPNYG00000017476	snrnp200	91	100.000	Pundamilia_nyererei
ENSEEUG00000012178	SNRNP200	93	100.000	ENSPNAG00000010998	snrnp200	91	100.000	Pygocentrus_nattereri
ENSEEUG00000012178	SNRNP200	93	100.000	ENSRNOG00000012157	Snrnp200	88	100.000	Rattus_norvegicus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSRBIG00000044690	-	90	99.413	Rhinopithecus_bieti
ENSEEUG00000012178	SNRNP200	93	100.000	ENSRROG00000037952	-	88	100.000	Rhinopithecus_roxellana
ENSEEUG00000012178	SNRNP200	93	100.000	ENSSBOG00000035471	SNRNP200	97	99.115	Saimiri_boliviensis_boliviensis
ENSEEUG00000012178	SNRNP200	91	97.511	ENSSHAG00000000758	SNRNP200	89	97.511	Sarcophilus_harrisii
ENSEEUG00000012178	SNRNP200	93	100.000	ENSSFOG00015018826	snrnp200	88	100.000	Scleropages_formosus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSSMAG00000005463	snrnp200	88	100.000	Scophthalmus_maximus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSSDUG00000021410	snrnp200	88	100.000	Seriola_dumerili
ENSEEUG00000012178	SNRNP200	93	100.000	ENSSLDG00000010884	snrnp200	88	100.000	Seriola_lalandi_dorsalis
ENSEEUG00000012178	SNRNP200	89	100.000	ENSSARG00000010728	SNRNP200	87	100.000	Sorex_araneus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSSPUG00000003726	-	88	100.000	Sphenodon_punctatus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSSPAG00000001842	snrnp200	88	100.000	Stegastes_partitus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSSSCG00000008127	SNRNP200	91	97.895	Sus_scrofa
ENSEEUG00000012178	SNRNP200	89	87.350	ENSTGUG00000014475	-	87	87.350	Taeniopygia_guttata
ENSEEUG00000012178	SNRNP200	93	100.000	ENSTRUG00000001307	snrnp200	88	100.000	Takifugu_rubripes
ENSEEUG00000012178	SNRNP200	93	100.000	ENSTNIG00000004320	snrnp200	90	100.000	Tetraodon_nigroviridis
ENSEEUG00000012178	SNRNP200	76	98.990	ENSTBEG00000003329	-	56	98.990	Tupaia_belangeri
ENSEEUG00000012178	SNRNP200	93	100.000	ENSTTRG00000004983	SNRNP200	88	100.000	Tursiops_truncatus
ENSEEUG00000012178	SNRNP200	70	100.000	ENSUAMG00000008395	-	81	100.000	Ursus_americanus
ENSEEUG00000012178	SNRNP200	93	100.000	ENSUMAG00000012385	SNRNP200	88	100.000	Ursus_maritimus
ENSEEUG00000012178	SNRNP200	81	100.000	ENSVPAG00000006434	SNRNP200	56	100.000	Vicugna_pacos
ENSEEUG00000012178	SNRNP200	93	100.000	ENSVVUG00000026247	SNRNP200	91	100.000	Vulpes_vulpes
ENSEEUG00000012178	SNRNP200	93	100.000	ENSXETG00000001243	snrnp200	88	100.000	Xenopus_tropicalis
ENSEEUG00000012178	SNRNP200	89	89.196	ENSXMAG00000002058	snrnp200	90	89.175	Xiphophorus_maculatus