EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000012340 (Gene tree)
Gene ID: -
Gene Symbol: LRPPRC
Alias: -
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 173457 bases
Position: chrGeneScaffold_4208:4155-177611
Accession: 15714
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000011323	PPR	PF01535.20	9.7e-17	1	2
ENSEEUP00000011323	PPR	PF01535.20	9.7e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000012419	LRPPRC-201	3858	-	ENSEEUP00000011323	1286 (aa)	-	UPI0000F63EA7

Gene Model

Click here to download ENSEEUG00000012340's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000012340's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000012340	LRPPRC	81	56.618	ENSAPOG00000016610	lrpprc	77	56.618	Acanthochromis_polyacanthus
ENSEEUG00000012340	LRPPRC	91	70.281	ENSAMEG00000005852	LRPPRC	86	70.281	Ailuropoda_melanoleuca
ENSEEUG00000012340	LRPPRC	79	55.231	ENSACIG00000009604	lrpprc	74	55.231	Amphilophus_citrinellus
ENSEEUG00000012340	LRPPRC	91	43.408	ENSAOCG00000005886	lrpprc	82	43.408	Amphiprion_ocellaris
ENSEEUG00000012340	LRPPRC	81	56.691	ENSAPEG00000002937	lrpprc	85	54.505	Amphiprion_percula
ENSEEUG00000012340	LRPPRC	80	54.670	ENSATEG00000010555	lrpprc	95	54.670	Anabas_testudineus
ENSEEUG00000012340	LRPPRC	90	51.406	ENSACAG00000029278	LRPPRC	87	51.406	Anolis_carolinensis
ENSEEUG00000012340	LRPPRC	93	69.478	ENSANAG00000027440	LRPPRC	99	62.760	Aotus_nancymaae
ENSEEUG00000012340	LRPPRC	80	54.975	ENSACLG00000023712	lrpprc	91	51.974	Astatotilapia_calliptera
ENSEEUG00000012340	LRPPRC	93	69.076	ENSCJAG00000000794	LRPPRC	99	62.193	Callithrix_jacchus
ENSEEUG00000012340	LRPPRC	93	68.273	ENSCHIG00000020173	LRPPRC	87	68.273	Capra_hircus
ENSEEUG00000012340	LRPPRC	80	65.789	ENSCAPG00000013631	LRPPRC	80	65.789	Cavia_aperea
ENSEEUG00000012340	LRPPRC	80	72.289	ENSCPOG00000000204	LRPPRC	85	72.289	Cavia_porcellus
ENSEEUG00000012340	LRPPRC	93	69.478	ENSCCAG00000031900	LRPPRC	99	62.760	Cebus_capucinus
ENSEEUG00000012340	LRPPRC	93	69.880	ENSCATG00000014187	LRPPRC	99	62.571	Cercocebus_atys
ENSEEUG00000012340	LRPPRC	92	67.871	ENSCLAG00000005203	LRPPRC	87	67.871	Chinchilla_lanigera
ENSEEUG00000012340	LRPPRC	93	70.683	ENSCSAG00000013233	LRPPRC	87	70.683	Chlorocebus_sabaeus
ENSEEUG00000012340	LRPPRC	82	71.429	ENSCHOG00000003631	LRPPRC	77	71.429	Choloepus_hoffmanni
ENSEEUG00000012340	LRPPRC	93	69.880	ENSCANG00000034961	LRPPRC	79	90.000	Colobus_angolensis_palliatus
ENSEEUG00000012340	LRPPRC	93	64.777	ENSCGRG00001016261	Lrpprc	87	64.777	Cricetulus_griseus_chok1gshd
ENSEEUG00000012340	LRPPRC	93	64.777	ENSCGRG00000004072	Lrpprc	87	64.777	Cricetulus_griseus_crigri
ENSEEUG00000012340	LRPPRC	81	41.226	ENSCSEG00000003850	lrpprc	88	45.618	Cynoglossus_semilaevis
ENSEEUG00000012340	LRPPRC	81	55.122	ENSCVAG00000012967	lrpprc	73	55.122	Cyprinodon_variegatus
ENSEEUG00000012340	LRPPRC	93	41.490	ENSDARG00000043970	lrpprc	85	41.490	Danio_rerio
ENSEEUG00000012340	LRPPRC	93	69.478	ENSDNOG00000012594	-	87	69.478	Dasypus_novemcinctus
ENSEEUG00000012340	LRPPRC	80	45.483	ENSDNOG00000032336	-	92	45.483	Dasypus_novemcinctus
ENSEEUG00000012340	LRPPRC	93	68.675	ENSDORG00000012233	Lrpprc	87	68.675	Dipodomys_ordii
ENSEEUG00000012340	LRPPRC	93	67.871	ENSETEG00000006657	LRPPRC	87	67.871	Echinops_telfairi
ENSEEUG00000012340	LRPPRC	75	54.321	ENSELUG00000012803	lrpprc	76	54.321	Esox_lucius
ENSEEUG00000012340	LRPPRC	93	72.289	ENSFCAG00000013468	LRPPRC	87	72.289	Felis_catus
ENSEEUG00000012340	LRPPRC	90	45.919	ENSFALG00000012738	LRPPRC	87	45.919	Ficedula_albicollis
ENSEEUG00000012340	LRPPRC	93	68.675	ENSFDAG00000015328	LRPPRC	87	68.675	Fukomys_damarensis
ENSEEUG00000012340	LRPPRC	79	56.608	ENSFHEG00000019604	lrpprc	72	56.608	Fundulus_heteroclitus
ENSEEUG00000012340	LRPPRC	82	51.919	ENSGMOG00000008337	lrpprc	77	51.919	Gadus_morhua
ENSEEUG00000012340	LRPPRC	80	54.613	ENSGAFG00000001455	lrpprc	73	54.613	Gambusia_affinis
ENSEEUG00000012340	LRPPRC	93	41.401	ENSGACG00000010679	lrpprc	86	42.117	Gasterosteus_aculeatus
ENSEEUG00000012340	LRPPRC	80	54.975	ENSHBUG00000000393	lrpprc	71	54.975	Haplochromis_burtoni
ENSEEUG00000012340	LRPPRC	93	68.675	ENSHGLG00000006123	LRPPRC	87	68.675	Heterocephalus_glaber_female
ENSEEUG00000012340	LRPPRC	93	42.641	ENSHCOG00000002107	lrpprc	89	42.641	Hippocampus_comes
ENSEEUG00000012340	LRPPRC	93	42.480	ENSIPUG00000009406	lrpprc	85	42.581	Ictalurus_punctatus
ENSEEUG00000012340	LRPPRC	93	68.675	ENSSTOG00000011185	LRPPRC	87	68.675	Ictidomys_tridecemlineatus
ENSEEUG00000012340	LRPPRC	93	66.397	ENSJJAG00000020475	Lrpprc	87	66.397	Jaculus_jaculus
ENSEEUG00000012340	LRPPRC	80	51.970	ENSKMAG00000003287	lrpprc	63	51.970	Kryptolebias_marmoratus
ENSEEUG00000012340	LRPPRC	80	54.126	ENSLBEG00000023225	lrpprc	88	53.125	Labrus_bergylta
ENSEEUG00000012340	LRPPRC	93	50.602	ENSLACG00000014030	LRPPRC	86	50.602	Latimeria_chalumnae
ENSEEUG00000012340	LRPPRC	89	49.392	ENSLOCG00000016390	lrpprc	78	49.392	Lepisosteus_oculatus
ENSEEUG00000012340	LRPPRC	93	67.470	ENSLAFG00000008614	LRPPRC	87	67.470	Loxodonta_africana
ENSEEUG00000012340	LRPPRC	93	69.478	ENSMFAG00000041560	LRPPRC	82	86.667	Macaca_fascicularis
ENSEEUG00000012340	LRPPRC	92	69.478	ENSMMUG00000019841	LRPPRC	82	86.667	Macaca_mulatta
ENSEEUG00000012340	LRPPRC	93	69.076	ENSMNEG00000031613	LRPPRC	99	62.760	Macaca_nemestrina
ENSEEUG00000012340	LRPPRC	77	52.539	ENSMAMG00000021835	lrpprc	76	52.539	Mastacembelus_armatus
ENSEEUG00000012340	LRPPRC	80	54.975	ENSMZEG00005027379	lrpprc	73	54.975	Maylandia_zebra
ENSEEUG00000012340	LRPPRC	93	65.863	ENSMAUG00000012118	Lrpprc	87	65.863	Mesocricetus_auratus
ENSEEUG00000012340	LRPPRC	93	70.281	ENSMICG00000010486	LRPPRC	99	63.208	Microcebus_murinus
ENSEEUG00000012340	LRPPRC	93	68.016	ENSMOCG00000006048	Lrpprc	87	68.016	Microtus_ochrogaster
ENSEEUG00000012340	LRPPRC	79	54.726	ENSMMOG00000007830	lrpprc	76	54.634	Mola_mola
ENSEEUG00000012340	LRPPRC	90	57.831	ENSMODG00000000648	LRPPRC	86	57.831	Monodelphis_domestica
ENSEEUG00000012340	LRPPRC	91	42.275	ENSMALG00000001271	lrpprc	82	42.275	Monopterus_albus
ENSEEUG00000012340	LRPPRC	93	62.948	ENSMPUG00000011800	LRPPRC	93	69.065	Mustela_putorius_furo
ENSEEUG00000012340	LRPPRC	93	73.494	ENSMLUG00000010575	LRPPRC	87	73.494	Myotis_lucifugus
ENSEEUG00000012340	LRPPRC	93	68.421	ENSNGAG00000013069	Lrpprc	87	68.421	Nannospalax_galili
ENSEEUG00000012340	LRPPRC	78	53.316	ENSNBRG00000013202	lrpprc	92	52.242	Neolamprologus_brichardi
ENSEEUG00000012340	LRPPRC	91	69.333	ENSNLEG00000016782	LRPPRC	99	63.138	Nomascus_leucogenys
ENSEEUG00000012340	LRPPRC	82	68.675	ENSOPRG00000016774	LRPPRC	78	68.675	Ochotona_princeps
ENSEEUG00000012340	LRPPRC	92	69.076	ENSODEG00000011211	LRPPRC	87	69.076	Octodon_degus
ENSEEUG00000012340	LRPPRC	90	43.351	ENSONIG00000000917	lrpprc	78	50.325	Oreochromis_niloticus
ENSEEUG00000012340	LRPPRC	93	69.478	ENSOCUG00000015046	LRPPRC	83	69.478	Oryctolagus_cuniculus
ENSEEUG00000012340	LRPPRC	83	53.226	ENSORLG00000004605	lrpprc	82	53.226	Oryzias_latipes
ENSEEUG00000012340	LRPPRC	86	43.448	ENSORLG00020012536	lrpprc	86	42.267	Oryzias_latipes_hni
ENSEEUG00000012340	LRPPRC	83	53.318	ENSORLG00015018270	lrpprc	85	53.318	Oryzias_latipes_hsok
ENSEEUG00000012340	LRPPRC	93	67.068	ENSOGAG00000012798	LRPPRC	87	67.068	Otolemur_garnettii
ENSEEUG00000012340	LRPPRC	93	69.478	ENSOARG00000006522	LRPPRC	87	69.478	Ovis_aries
ENSEEUG00000012340	LRPPRC	93	68.273	ENSPPAG00000040876	LRPPRC	99	62.453	Pan_paniscus
ENSEEUG00000012340	LRPPRC	93	72.289	ENSPPRG00000006578	LRPPRC	87	72.289	Panthera_pardus
ENSEEUG00000012340	LRPPRC	91	72.289	ENSPTIG00000000933	LRPPRC	84	72.289	Panthera_tigris_altaica
ENSEEUG00000012340	LRPPRC	93	68.273	ENSPTRG00000011880	LRPPRC	99	62.571	Pan_troglodytes
ENSEEUG00000012340	LRPPRC	93	70.281	ENSPANG00000020731	LRPPRC	99	62.571	Papio_anubis
ENSEEUG00000012340	LRPPRC	75	50.985	ENSPKIG00000022232	lrpprc	79	50.122	Paramormyrops_kingsleyae
ENSEEUG00000012340	LRPPRC	88	37.823	ENSPMAG00000002147	lrpprc	86	37.823	Petromyzon_marinus
ENSEEUG00000012340	LRPPRC	79	54.364	ENSPFOG00000011227	lrpprc	77	52.834	Poecilia_formosa
ENSEEUG00000012340	LRPPRC	79	54.364	ENSPLAG00000004018	lrpprc	72	54.364	Poecilia_latipinna
ENSEEUG00000012340	LRPPRC	79	54.613	ENSPMEG00000016425	lrpprc	72	54.613	Poecilia_mexicana
ENSEEUG00000012340	LRPPRC	79	54.250	ENSPREG00000003662	lrpprc	72	54.250	Poecilia_reticulata
ENSEEUG00000012340	LRPPRC	65	68.644	ENSPCAG00000001430	LRPPRC	62	68.644	Procavia_capensis
ENSEEUG00000012340	LRPPRC	86	73.092	ENSPVAG00000002007	LRPPRC	81	73.092	Pteropus_vampyrus
ENSEEUG00000012340	LRPPRC	83	51.448	ENSPNYG00000000756	lrpprc	90	51.106	Pundamilia_nyererei
ENSEEUG00000012340	LRPPRC	90	44.924	ENSPNAG00000002895	lrpprc	82	44.924	Pygocentrus_nattereri
ENSEEUG00000012340	LRPPRC	93	66.802	ENSRNOG00000005877	Lrpprc	87	66.802	Rattus_norvegicus
ENSEEUG00000012340	LRPPRC	93	69.880	ENSRBIG00000031552	LRPPRC	87	69.880	Rhinopithecus_bieti
ENSEEUG00000012340	LRPPRC	93	68.675	ENSSBOG00000011807	LRPPRC	99	62.004	Saimiri_boliviensis_boliviensis
ENSEEUG00000012340	LRPPRC	90	56.225	ENSSHAG00000018725	LRPPRC	86	56.225	Sarcophilus_harrisii
ENSEEUG00000012340	LRPPRC	90	43.102	ENSSFOG00015001042	lrpprc	81	43.102	Scleropages_formosus
ENSEEUG00000012340	LRPPRC	85	53.415	ENSSDUG00000019062	lrpprc	77	53.415	Seriola_dumerili
ENSEEUG00000012340	LRPPRC	71	56.684	ENSSLDG00000023028	lrpprc	79	43.896	Seriola_lalandi_dorsalis
ENSEEUG00000012340	LRPPRC	74	69.118	ENSSARG00000000426	LRPPRC	81	69.118	Sorex_araneus
ENSEEUG00000012340	LRPPRC	81	53.171	ENSSPAG00000000162	lrpprc	73	53.171	Stegastes_partitus
ENSEEUG00000012340	LRPPRC	93	69.880	ENSSSCG00000008452	LRPPRC	87	69.880	Sus_scrofa
ENSEEUG00000012340	LRPPRC	86	47.238	ENSTGUG00000003759	LRPPRC	85	47.238	Taeniopygia_guttata
ENSEEUG00000012340	LRPPRC	80	52.340	ENSTRUG00000008409	lrpprc	80	52.340	Takifugu_rubripes
ENSEEUG00000012340	LRPPRC	80	57.214	ENSTNIG00000007470	lrpprc	77	57.214	Tetraodon_nigroviridis
ENSEEUG00000012340	LRPPRC	93	65.258	ENSTTRG00000006403	LRPPRC	87	65.258	Tursiops_truncatus
ENSEEUG00000012340	LRPPRC	87	67.647	ENSVPAG00000008993	LRPPRC	83	67.647	Vicugna_pacos
ENSEEUG00000012340	LRPPRC	93	49.271	ENSXETG00000009296	lrpprc	87	48.367	Xenopus_tropicalis
ENSEEUG00000012340	LRPPRC	78	52.593	ENSXCOG00000013343	lrpprc	86	48.984	Xiphophorus_couchianus
ENSEEUG00000012340	LRPPRC	80	53.865	ENSXMAG00000018108	lrpprc	73	53.865	Xiphophorus_maculatus