EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000012569 (Gene tree)
Gene ID: -
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 1412 bases
Position: chrscaffold_16660:4-1415
Accession: 587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000011435	Exo_endo_phos	PF03372.23	1.3e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000012546	APEX1-201	864	-	ENSEEUP00000011435	288 (aa)	-	UPI0000F60DED

Gene Model

Click here to download ENSEEUG00000012569's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000012569's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000012569	APEX1	100	93.750	ENSG00000100823	APEX1	98	92.453	Homo_sapiens
ENSEEUG00000012569	APEX1	93	69.145	ENSAPOG00000017002	apex1	88	69.145	Acanthochromis_polyacanthus
ENSEEUG00000012569	APEX1	100	95.139	ENSAMEG00000005418	APEX1	91	95.139	Ailuropoda_melanoleuca
ENSEEUG00000012569	APEX1	93	70.896	ENSACIG00000010653	apex1	91	71.004	Amphilophus_citrinellus
ENSEEUG00000012569	APEX1	93	68.773	ENSAOCG00000009649	apex1	87	68.773	Amphiprion_ocellaris
ENSEEUG00000012569	APEX1	93	68.773	ENSAPEG00000021453	apex1	87	68.773	Amphiprion_percula
ENSEEUG00000012569	APEX1	92	70.677	ENSATEG00000002883	apex1	85	70.632	Anabas_testudineus
ENSEEUG00000012569	APEX1	94	70.370	ENSACAG00000008099	APEX1	85	70.370	Anolis_carolinensis
ENSEEUG00000012569	APEX1	100	93.056	ENSANAG00000030117	APEX1	91	93.056	Aotus_nancymaae
ENSEEUG00000012569	APEX1	92	70.677	ENSACLG00000018441	apex1	86	70.632	Astatotilapia_calliptera
ENSEEUG00000012569	APEX1	97	68.214	ENSAMXG00000034699	apex1	86	69.517	Astyanax_mexicanus
ENSEEUG00000012569	APEX1	100	95.486	ENSBTAG00000002745	APEX1	91	95.486	Bos_taurus
ENSEEUG00000012569	APEX1	85	45.161	WBGene00001372	exo-3	85	45.161	Caenorhabditis_elegans
ENSEEUG00000012569	APEX1	100	93.750	ENSCJAG00000009726	APEX1	91	93.750	Callithrix_jacchus
ENSEEUG00000012569	APEX1	100	93.750	ENSCAFG00000032033	APEX1	91	93.750	Canis_familiaris
ENSEEUG00000012569	APEX1	100	93.750	ENSCAFG00020014377	-	91	93.750	Canis_lupus_dingo
ENSEEUG00000012569	APEX1	53	91.447	ENSCAFG00020023002	-	84	91.447	Canis_lupus_dingo
ENSEEUG00000012569	APEX1	91	78.927	ENSCHIG00000014537	-	83	78.927	Capra_hircus
ENSEEUG00000012569	APEX1	100	94.792	ENSCHIG00000007298	-	91	94.792	Capra_hircus
ENSEEUG00000012569	APEX1	100	93.056	ENSTSYG00000034813	APEX1	91	93.056	Carlito_syrichta
ENSEEUG00000012569	APEX1	90	85.441	ENSCAPG00000016235	APEX1	87	93.805	Cavia_aperea
ENSEEUG00000012569	APEX1	100	92.708	ENSCPOG00000030909	APEX1	91	92.708	Cavia_porcellus
ENSEEUG00000012569	APEX1	100	79.861	ENSCCAG00000031931	-	90	79.861	Cebus_capucinus
ENSEEUG00000012569	APEX1	100	93.750	ENSCCAG00000033056	-	91	93.750	Cebus_capucinus
ENSEEUG00000012569	APEX1	100	93.403	ENSCATG00000015580	APEX1	91	93.403	Cercocebus_atys
ENSEEUG00000012569	APEX1	100	93.750	ENSCLAG00000001002	APEX1	91	93.750	Chinchilla_lanigera
ENSEEUG00000012569	APEX1	100	93.056	ENSCSAG00000016685	-	91	93.056	Chlorocebus_sabaeus
ENSEEUG00000012569	APEX1	100	93.056	ENSCSAG00000016670	-	91	93.056	Chlorocebus_sabaeus
ENSEEUG00000012569	APEX1	100	70.139	ENSCPBG00000009567	APEX1	90	70.139	Chrysemys_picta_bellii
ENSEEUG00000012569	APEX1	97	53.333	ENSCING00000008137	-	81	56.863	Ciona_intestinalis
ENSEEUG00000012569	APEX1	99	45.364	ENSCSAVG00000007144	-	96	51.406	Ciona_savignyi
ENSEEUG00000012569	APEX1	100	93.750	ENSCANG00000030726	APEX1	91	93.750	Colobus_angolensis_palliatus
ENSEEUG00000012569	APEX1	100	90.625	ENSCGRG00001017046	Apex1	91	90.625	Cricetulus_griseus_chok1gshd
ENSEEUG00000012569	APEX1	100	90.625	ENSCGRG00000008984	Apex1	91	90.625	Cricetulus_griseus_crigri
ENSEEUG00000012569	APEX1	96	68.231	ENSCSEG00000017499	apex1	86	68.773	Cynoglossus_semilaevis
ENSEEUG00000012569	APEX1	93	71.004	ENSCVAG00000022075	apex1	86	71.004	Cyprinodon_variegatus
ENSEEUG00000012569	APEX1	97	65.203	ENSDARG00000045843	apex1	86	69.517	Danio_rerio
ENSEEUG00000012569	APEX1	100	88.194	ENSDNOG00000042234	APEX1	85	88.194	Dasypus_novemcinctus
ENSEEUG00000012569	APEX1	100	93.403	ENSDORG00000001616	Apex1	91	93.403	Dipodomys_ordii
ENSEEUG00000012569	APEX1	100	92.361	ENSETEG00000004855	-	91	92.361	Echinops_telfairi
ENSEEUG00000012569	APEX1	79	64.192	ENSEBUG00000000622	-	88	64.192	Eptatretus_burgeri
ENSEEUG00000012569	APEX1	100	94.792	ENSEASG00005017489	APEX1	67	94.792	Equus_asinus_asinus
ENSEEUG00000012569	APEX1	100	94.792	ENSECAG00000022325	APEX1	74	94.792	Equus_caballus
ENSEEUG00000012569	APEX1	93	68.914	ENSELUG00000021706	apex1	86	68.773	Esox_lucius
ENSEEUG00000012569	APEX1	100	94.444	ENSFCAG00000030869	APEX1	91	94.444	Felis_catus
ENSEEUG00000012569	APEX1	100	92.708	ENSFDAG00000006120	APEX1	91	92.708	Fukomys_damarensis
ENSEEUG00000012569	APEX1	93	71.375	ENSFHEG00000009031	apex1	72	71.375	Fundulus_heteroclitus
ENSEEUG00000012569	APEX1	97	63.669	ENSGMOG00000007943	apex1	86	64.684	Gadus_morhua
ENSEEUG00000012569	APEX1	93	72.119	ENSGAFG00000005311	apex1	86	72.119	Gambusia_affinis
ENSEEUG00000012569	APEX1	93	69.517	ENSGACG00000019497	apex1	96	69.531	Gasterosteus_aculeatus
ENSEEUG00000012569	APEX1	100	69.792	ENSGAGG00000014999	APEX1	90	69.792	Gopherus_agassizii
ENSEEUG00000012569	APEX1	100	93.403	ENSGGOG00000002128	APEX1	91	93.403	Gorilla_gorilla
ENSEEUG00000012569	APEX1	92	70.301	ENSHBUG00000005894	apex1	87	70.260	Haplochromis_burtoni
ENSEEUG00000012569	APEX1	100	94.097	ENSHGLG00000002848	APEX1	91	94.097	Heterocephalus_glaber_female
ENSEEUG00000012569	APEX1	100	94.097	ENSHGLG00100017878	APEX1	91	94.097	Heterocephalus_glaber_male
ENSEEUG00000012569	APEX1	98	67.491	ENSHCOG00000009961	apex1	86	69.517	Hippocampus_comes
ENSEEUG00000012569	APEX1	97	68.459	ENSIPUG00000005799	apex1	86	69.888	Ictalurus_punctatus
ENSEEUG00000012569	APEX1	100	91.667	ENSSTOG00000010096	APEX1	91	91.667	Ictidomys_tridecemlineatus
ENSEEUG00000012569	APEX1	100	83.333	ENSJJAG00000020465	-	93	83.333	Jaculus_jaculus
ENSEEUG00000012569	APEX1	99	83.624	ENSJJAG00000003660	-	90	83.624	Jaculus_jaculus
ENSEEUG00000012569	APEX1	100	93.056	ENSJJAG00000012067	-	91	93.056	Jaculus_jaculus
ENSEEUG00000012569	APEX1	93	70.632	ENSKMAG00000021171	apex1	86	70.632	Kryptolebias_marmoratus
ENSEEUG00000012569	APEX1	93	67.658	ENSLBEG00000010248	apex1	86	67.658	Labrus_bergylta
ENSEEUG00000012569	APEX1	100	67.014	ENSLACG00000008617	APEX1	86	68.498	Latimeria_chalumnae
ENSEEUG00000012569	APEX1	100	67.361	ENSLOCG00000015516	apex1	85	69.517	Lepisosteus_oculatus
ENSEEUG00000012569	APEX1	96	93.478	ENSLAFG00000021872	APEX1	87	93.478	Loxodonta_africana
ENSEEUG00000012569	APEX1	100	93.056	ENSMFAG00000002565	APEX1	91	93.056	Macaca_fascicularis
ENSEEUG00000012569	APEX1	100	93.056	ENSMMUG00000048039	APEX1	91	93.056	Macaca_mulatta
ENSEEUG00000012569	APEX1	100	93.056	ENSMNEG00000036944	APEX1	91	93.056	Macaca_nemestrina
ENSEEUG00000012569	APEX1	100	93.403	ENSMLEG00000042125	APEX1	91	93.403	Mandrillus_leucophaeus
ENSEEUG00000012569	APEX1	93	70.632	ENSMAMG00000023526	apex1	86	70.632	Mastacembelus_armatus
ENSEEUG00000012569	APEX1	92	70.677	ENSMZEG00005014187	apex1	86	70.632	Maylandia_zebra
ENSEEUG00000012569	APEX1	100	90.625	ENSMAUG00000013994	Apex1	91	90.625	Mesocricetus_auratus
ENSEEUG00000012569	APEX1	100	94.444	ENSMICG00000043554	APEX1	91	94.444	Microcebus_murinus
ENSEEUG00000012569	APEX1	100	91.319	ENSMOCG00000013721	Apex1	91	91.319	Microtus_ochrogaster
ENSEEUG00000012569	APEX1	93	67.778	ENSMMOG00000010031	apex1	84	67.778	Mola_mola
ENSEEUG00000012569	APEX1	94	88.971	ENSMODG00000007125	APEX1	86	88.727	Monodelphis_domestica
ENSEEUG00000012569	APEX1	93	62.825	ENSMALG00000011699	apex1	72	62.825	Monopterus_albus
ENSEEUG00000012569	APEX1	100	92.708	MGP_CAROLIEiJ_G0019209	Apex1	91	92.708	Mus_caroli
ENSEEUG00000012569	APEX1	100	93.750	ENSMUSG00000035960	Apex1	91	93.750	Mus_musculus
ENSEEUG00000012569	APEX1	93	94.007	MGP_PahariEiJ_G0030232	Apex1	91	93.750	Mus_pahari
ENSEEUG00000012569	APEX1	100	93.750	MGP_SPRETEiJ_G0020101	Apex1	91	93.750	Mus_spretus
ENSEEUG00000012569	APEX1	100	93.448	ENSMLUG00000028957	APEX1	86	94.928	Myotis_lucifugus
ENSEEUG00000012569	APEX1	100	70.139	ENSNGAG00000021748	-	88	70.139	Nannospalax_galili
ENSEEUG00000012569	APEX1	100	92.361	ENSNGAG00000002725	-	91	92.361	Nannospalax_galili
ENSEEUG00000012569	APEX1	92	70.301	ENSNBRG00000005334	apex1	79	70.260	Neolamprologus_brichardi
ENSEEUG00000012569	APEX1	100	93.056	ENSNLEG00000010839	APEX1	92	93.056	Nomascus_leucogenys
ENSEEUG00000012569	APEX1	100	86.458	ENSMEUG00000014519	APEX1	88	88.000	Notamacropus_eugenii
ENSEEUG00000012569	APEX1	100	93.056	ENSOPRG00000014029	APEX1	87	93.478	Ochotona_princeps
ENSEEUG00000012569	APEX1	95	72.857	ENSODEG00000006583	-	85	73.234	Octodon_degus
ENSEEUG00000012569	APEX1	100	74.653	ENSODEG00000004777	-	91	74.653	Octodon_degus
ENSEEUG00000012569	APEX1	100	94.792	ENSODEG00000001703	-	91	94.792	Octodon_degus
ENSEEUG00000012569	APEX1	93	70.896	ENSONIG00000012089	apex1	86	71.004	Oreochromis_niloticus
ENSEEUG00000012569	APEX1	95	81.091	ENSOANG00000008836	APEX1	68	80.797	Ornithorhynchus_anatinus
ENSEEUG00000012569	APEX1	100	93.403	ENSOCUG00000005022	APEX1	91	93.403	Oryctolagus_cuniculus
ENSEEUG00000012569	APEX1	93	70.522	ENSORLG00000012378	apex1	86	70.632	Oryzias_latipes
ENSEEUG00000012569	APEX1	93	70.522	ENSORLG00020021371	apex1	86	70.632	Oryzias_latipes_hni
ENSEEUG00000012569	APEX1	93	70.522	ENSORLG00015020089	apex1	86	70.632	Oryzias_latipes_hsok
ENSEEUG00000012569	APEX1	93	69.888	ENSOMEG00000018876	apex1	86	69.888	Oryzias_melastigma
ENSEEUG00000012569	APEX1	100	82.639	ENSOGAG00000029355	-	92	82.639	Otolemur_garnettii
ENSEEUG00000012569	APEX1	100	92.708	ENSOGAG00000013335	-	91	92.708	Otolemur_garnettii
ENSEEUG00000012569	APEX1	100	90.972	ENSOARG00000001876	-	94	90.972	Ovis_aries
ENSEEUG00000012569	APEX1	100	93.750	ENSOARG00000019740	-	91	93.750	Ovis_aries
ENSEEUG00000012569	APEX1	100	80.556	ENSOARG00000014424	-	88	82.182	Ovis_aries
ENSEEUG00000012569	APEX1	100	93.750	ENSPPAG00000038760	APEX1	92	93.750	Pan_paniscus
ENSEEUG00000012569	APEX1	100	94.792	ENSPPRG00000011794	APEX1	91	94.792	Panthera_pardus
ENSEEUG00000012569	APEX1	100	94.444	ENSPTIG00000014829	APEX1	91	94.444	Panthera_tigris_altaica
ENSEEUG00000012569	APEX1	100	93.750	ENSPTRG00000006093	APEX1	92	93.750	Pan_troglodytes
ENSEEUG00000012569	APEX1	100	93.403	ENSPANG00000022757	APEX1	91	93.403	Papio_anubis
ENSEEUG00000012569	APEX1	93	68.165	ENSPKIG00000003504	apex1	87	67.273	Paramormyrops_kingsleyae
ENSEEUG00000012569	APEX1	81	65.665	ENSPMGG00000016596	apex1	70	65.665	Periophthalmus_magnuspinnatus
ENSEEUG00000012569	APEX1	100	93.056	ENSPEMG00000019097	Apex1	91	93.056	Peromyscus_maniculatus_bairdii
ENSEEUG00000012569	APEX1	100	63.668	ENSPMAG00000007275	-	92	66.052	Petromyzon_marinus
ENSEEUG00000012569	APEX1	95	88.645	ENSPCIG00000023274	APEX1	86	88.727	Phascolarctos_cinereus
ENSEEUG00000012569	APEX1	93	72.491	ENSPFOG00000004178	apex1	86	72.491	Poecilia_formosa
ENSEEUG00000012569	APEX1	93	72.119	ENSPLAG00000012779	apex1	86	72.119	Poecilia_latipinna
ENSEEUG00000012569	APEX1	93	72.491	ENSPMEG00000019623	apex1	86	72.491	Poecilia_mexicana
ENSEEUG00000012569	APEX1	93	71.747	ENSPREG00000014298	apex1	86	71.747	Poecilia_reticulata
ENSEEUG00000012569	APEX1	100	92.708	ENSPPYG00000005565	APEX1	91	92.708	Pongo_abelii
ENSEEUG00000012569	APEX1	100	89.236	ENSPCAG00000010376	APEX1	91	89.236	Procavia_capensis
ENSEEUG00000012569	APEX1	100	93.750	ENSPCOG00000021564	APEX1	91	93.750	Propithecus_coquereli
ENSEEUG00000012569	APEX1	100	93.103	ENSPVAG00000010736	APEX1	86	94.203	Pteropus_vampyrus
ENSEEUG00000012569	APEX1	92	70.677	ENSPNYG00000023940	apex1	86	70.632	Pundamilia_nyererei
ENSEEUG00000012569	APEX1	93	68.165	ENSPNAG00000020897	apex1	85	69.020	Pygocentrus_nattereri
ENSEEUG00000012569	APEX1	100	93.403	ENSRNOG00000009663	Apex1	91	93.403	Rattus_norvegicus
ENSEEUG00000012569	APEX1	100	93.403	ENSRBIG00000038325	APEX1	89	93.403	Rhinopithecus_bieti
ENSEEUG00000012569	APEX1	100	93.403	ENSSBOG00000018921	-	91	93.403	Saimiri_boliviensis_boliviensis
ENSEEUG00000012569	APEX1	99	80.769	ENSSBOG00000031372	-	90	81.522	Saimiri_boliviensis_boliviensis
ENSEEUG00000012569	APEX1	95	87.681	ENSSHAG00000013524	APEX1	86	87.410	Sarcophilus_harrisii
ENSEEUG00000012569	APEX1	93	65.918	ENSSFOG00015001948	apex1	88	65.091	Scleropages_formosus
ENSEEUG00000012569	APEX1	93	69.403	ENSSMAG00000013348	apex1	85	69.517	Scophthalmus_maximus
ENSEEUG00000012569	APEX1	93	69.145	ENSSDUG00000016377	apex1	86	69.145	Seriola_dumerili
ENSEEUG00000012569	APEX1	93	69.517	ENSSLDG00000023005	apex1	86	69.517	Seriola_lalandi_dorsalis
ENSEEUG00000012569	APEX1	96	70.652	ENSSPUG00000000531	APEX1	92	70.652	Sphenodon_punctatus
ENSEEUG00000012569	APEX1	93	69.517	ENSSPAG00000000458	apex1	88	69.517	Stegastes_partitus
ENSEEUG00000012569	APEX1	100	94.097	ENSSSCG00000040060	-	91	94.097	Sus_scrofa
ENSEEUG00000012569	APEX1	81	64.315	ENSSSCG00000039705	-	82	65.919	Sus_scrofa
ENSEEUG00000012569	APEX1	78	57.965	ENSTGUG00000014378	APEX1	96	57.965	Taeniopygia_guttata
ENSEEUG00000012569	APEX1	93	67.164	ENSTRUG00000004268	apex1	81	67.286	Takifugu_rubripes
ENSEEUG00000012569	APEX1	96	66.426	ENSTNIG00000005778	apex1	87	67.658	Tetraodon_nigroviridis
ENSEEUG00000012569	APEX1	100	89.931	ENSTBEG00000006405	APEX1	91	89.931	Tupaia_belangeri
ENSEEUG00000012569	APEX1	78	94.248	ENSTTRG00000007860	APEX1	96	94.248	Tursiops_truncatus
ENSEEUG00000012569	APEX1	100	94.792	ENSUAMG00000010457	APEX1	91	94.792	Ursus_americanus
ENSEEUG00000012569	APEX1	100	94.792	ENSUMAG00000009178	APEX1	91	94.792	Ursus_maritimus
ENSEEUG00000012569	APEX1	78	87.611	ENSVPAG00000005083	APEX1	96	87.611	Vicugna_pacos
ENSEEUG00000012569	APEX1	100	93.056	ENSVVUG00000009010	APEX1	91	93.056	Vulpes_vulpes
ENSEEUG00000012569	APEX1	92	68.421	ENSXETG00000024773	apex1	84	68.421	Xenopus_tropicalis
ENSEEUG00000012569	APEX1	93	72.119	ENSXCOG00000015233	apex1	86	72.119	Xiphophorus_couchianus
ENSEEUG00000012569	APEX1	93	72.119	ENSXMAG00000006195	apex1	86	72.119	Xiphophorus_maculatus