EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000012589 (Gene tree)
Gene ID: -
Gene Symbol: R3HDM1
Alias: KIAA0029|R3HDM
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 106960 bases
Position: chrGeneScaffold_387:5521-112480
Accession: 9757
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000011504	R3H	PF01424.22	1.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000012624	R3HDM1-201	3300	-	ENSEEUP00000011504	1099 (aa)	-	UPI0000F6368E

Gene Model

Click here to download ENSEEUG00000012589's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000012589's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000012589	R3HDM1	53	68.571	ENSEEUG00000015698	ARPP21	73	68.571

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000012589	R3HDM1	91	87.061	ENSG00000048991	R3HDM1	91	89.630	Homo_sapiens
ENSEEUG00000012589	R3HDM1	56	52.143	ENSAPOG00000020850	r3hdm1	53	54.023	Acanthochromis_polyacanthus
ENSEEUG00000012589	R3HDM1	91	87.638	ENSAMEG00000014886	R3HDM1	91	88.007	Ailuropoda_melanoleuca
ENSEEUG00000012589	R3HDM1	56	52.143	ENSAOCG00000005192	r3hdm1	55	54.023	Amphiprion_ocellaris
ENSEEUG00000012589	R3HDM1	83	75.388	ENSAPLG00000015231	R3HDM1	87	74.586	Anas_platyrhynchos
ENSEEUG00000012589	R3HDM1	83	75.922	ENSACAG00000001676	R3HDM1	83	75.046	Anolis_carolinensis
ENSEEUG00000012589	R3HDM1	91	86.876	ENSANAG00000035334	R3HDM1	90	88.462	Aotus_nancymaae
ENSEEUG00000012589	R3HDM1	80	63.068	ENSAMXG00000012861	R3HDM1	89	63.068	Astyanax_mexicanus
ENSEEUG00000012589	R3HDM1	73	53.704	ENSAMXG00000003536	r3hdm1	79	58.980	Astyanax_mexicanus
ENSEEUG00000012589	R3HDM1	86	88.839	ENSBTAG00000013302	R3HDM1	86	88.839	Bos_taurus
ENSEEUG00000012589	R3HDM1	91	86.691	ENSCJAG00000011718	R3HDM1	91	86.691	Callithrix_jacchus
ENSEEUG00000012589	R3HDM1	91	87.269	ENSCAFG00000005075	R3HDM1	91	87.638	Canis_familiaris
ENSEEUG00000012589	R3HDM1	91	87.269	ENSCAFG00020016119	R3HDM1	99	87.638	Canis_lupus_dingo
ENSEEUG00000012589	R3HDM1	86	88.839	ENSCHIG00000020851	R3HDM1	86	88.839	Capra_hircus
ENSEEUG00000012589	R3HDM1	91	83.579	ENSCPOG00000012784	R3HDM1	95	83.814	Cavia_porcellus
ENSEEUG00000012589	R3HDM1	91	86.506	ENSCCAG00000027199	R3HDM1	90	88.462	Cebus_capucinus
ENSEEUG00000012589	R3HDM1	91	86.691	ENSCATG00000023642	R3HDM1	91	86.691	Cercocebus_atys
ENSEEUG00000012589	R3HDM1	91	84.133	ENSCLAG00000007962	R3HDM1	93	85.144	Chinchilla_lanigera
ENSEEUG00000012589	R3HDM1	91	86.876	ENSCSAG00000016356	R3HDM1	88	86.876	Chlorocebus_sabaeus
ENSEEUG00000012589	R3HDM1	60	89.349	ENSCHOG00000013638	R3HDM1	62	92.899	Choloepus_hoffmanni
ENSEEUG00000012589	R3HDM1	78	80.132	ENSCPBG00000009645	R3HDM1	81	85.600	Chrysemys_picta_bellii
ENSEEUG00000012589	R3HDM1	91	86.322	ENSCANG00000034748	R3HDM1	91	86.322	Colobus_angolensis_palliatus
ENSEEUG00000012589	R3HDM1	88	83.591	ENSCGRG00001012357	R3hdm1	85	82.472	Cricetulus_griseus_chok1gshd
ENSEEUG00000012589	R3HDM1	91	82.472	ENSCGRG00000012080	R3hdm1	100	78.405	Cricetulus_griseus_crigri
ENSEEUG00000012589	R3HDM1	56	49.823	ENSCVAG00000007582	r3hdm1	62	50.000	Cyprinodon_variegatus
ENSEEUG00000012589	R3HDM1	91	79.599	ENSDNOG00000000771	R3HDM1	91	79.964	Dasypus_novemcinctus
ENSEEUG00000012589	R3HDM1	71	85.772	ENSETEG00000013606	R3HDM1	73	86.585	Echinops_telfairi
ENSEEUG00000012589	R3HDM1	91	87.085	ENSEASG00005007392	R3HDM1	91	87.454	Equus_asinus_asinus
ENSEEUG00000012589	R3HDM1	91	87.085	ENSECAG00000019114	R3HDM1	91	87.454	Equus_caballus
ENSEEUG00000012589	R3HDM1	67	64.000	ENSELUG00000004909	R3HDM1	81	60.573	Esox_lucius
ENSEEUG00000012589	R3HDM1	59	65.426	ENSELUG00000014413	r3hdm1	76	65.957	Esox_lucius
ENSEEUG00000012589	R3HDM1	91	87.823	ENSFCAG00000027113	R3HDM1	91	88.192	Felis_catus
ENSEEUG00000012589	R3HDM1	78	72.059	ENSFALG00000013731	R3HDM1	71	73.025	Ficedula_albicollis
ENSEEUG00000012589	R3HDM1	91	84.686	ENSFDAG00000016478	R3HDM1	99	85.055	Fukomys_damarensis
ENSEEUG00000012589	R3HDM1	56	50.622	ENSFHEG00000018713	r3hdm1	62	52.390	Fundulus_heteroclitus
ENSEEUG00000012589	R3HDM1	76	82.759	ENSGALG00000012246	R3HDM1	83	75.410	Gallus_gallus
ENSEEUG00000012589	R3HDM1	57	57.616	ENSGACG00000014925	r3hdm1	62	58.278	Gasterosteus_aculeatus
ENSEEUG00000012589	R3HDM1	86	73.937	ENSGAGG00000007840	R3HDM1	86	73.752	Gopherus_agassizii
ENSEEUG00000012589	R3HDM1	91	87.061	ENSGGOG00000008156	R3HDM1	91	87.061	Gorilla_gorilla
ENSEEUG00000012589	R3HDM1	86	84.375	ENSHGLG00000015718	R3HDM1	99	84.658	Heterocephalus_glaber_female
ENSEEUG00000012589	R3HDM1	77	74.242	ENSHGLG00100015374	-	84	73.223	Heterocephalus_glaber_male
ENSEEUG00000012589	R3HDM1	86	84.375	ENSHGLG00100003184	-	93	86.475	Heterocephalus_glaber_male
ENSEEUG00000012589	R3HDM1	62	61.589	ENSIPUG00000001676	R3HDM1	76	61.758	Ictalurus_punctatus
ENSEEUG00000012589	R3HDM1	68	56.710	ENSIPUG00000013629	r3hdm1	71	57.737	Ictalurus_punctatus
ENSEEUG00000012589	R3HDM1	91	85.424	ENSSTOG00000007572	R3HDM1	99	85.424	Ictidomys_tridecemlineatus
ENSEEUG00000012589	R3HDM1	77	76.497	ENSLACG00000005334	R3HDM1	80	76.497	Latimeria_chalumnae
ENSEEUG00000012589	R3HDM1	74	67.939	ENSLOCG00000001641	r3hdm1	80	67.939	Lepisosteus_oculatus
ENSEEUG00000012589	R3HDM1	91	85.609	ENSLAFG00000009065	R3HDM1	88	86.716	Loxodonta_africana
ENSEEUG00000012589	R3HDM1	91	87.061	ENSMFAG00000030331	R3HDM1	91	87.061	Macaca_fascicularis
ENSEEUG00000012589	R3HDM1	91	86.876	ENSMMUG00000009844	R3HDM1	91	86.876	Macaca_mulatta
ENSEEUG00000012589	R3HDM1	91	87.061	ENSMNEG00000027793	R3HDM1	91	87.061	Macaca_nemestrina
ENSEEUG00000012589	R3HDM1	91	87.061	ENSMLEG00000043189	R3HDM1	91	87.061	Mandrillus_leucophaeus
ENSEEUG00000012589	R3HDM1	54	52.591	ENSMAMG00000004532	r3hdm1	58	53.167	Mastacembelus_armatus
ENSEEUG00000012589	R3HDM1	53	52.672	ENSMZEG00005003157	r3hdm1	58	53.244	Maylandia_zebra
ENSEEUG00000012589	R3HDM1	84	74.517	ENSMGAG00000012461	R3HDM1	87	73.849	Meleagris_gallopavo
ENSEEUG00000012589	R3HDM1	89	83.784	ENSMAUG00000010315	R3hdm1	100	78.738	Mesocricetus_auratus
ENSEEUG00000012589	R3HDM1	74	77.150	ENSMICG00000042655	-	89	77.094	Microcebus_murinus
ENSEEUG00000012589	R3HDM1	91	85.055	ENSMICG00000005900	-	91	85.424	Microcebus_murinus
ENSEEUG00000012589	R3HDM1	74	79.317	ENSMODG00000000923	R3HDM1	79	78.481	Monodelphis_domestica
ENSEEUG00000012589	R3HDM1	72	52.863	ENSMALG00000009000	r3hdm1	71	51.718	Monopterus_albus
ENSEEUG00000012589	R3HDM1	89	83.398	MGP_CAROLIEiJ_G0014543	R3hdm1	100	77.741	Mus_caroli
ENSEEUG00000012589	R3HDM1	83	83.398	ENSMUSG00000056211	R3hdm1	100	77.741	Mus_musculus
ENSEEUG00000012589	R3HDM1	89	82.819	MGP_PahariEiJ_G0027779	R3hdm1	100	77.409	Mus_pahari
ENSEEUG00000012589	R3HDM1	89	83.591	MGP_SPRETEiJ_G0015350	R3hdm1	100	77.741	Mus_spretus
ENSEEUG00000012589	R3HDM1	91	87.454	ENSMPUG00000002412	R3HDM1	91	87.823	Mustela_putorius_furo
ENSEEUG00000012589	R3HDM1	91	85.793	ENSMLUG00000013824	R3HDM1	91	85.793	Myotis_lucifugus
ENSEEUG00000012589	R3HDM1	91	86.876	ENSNLEG00000008622	R3HDM1	91	86.876	Nomascus_leucogenys
ENSEEUG00000012589	R3HDM1	72	83.708	ENSMEUG00000011784	R3HDM1	85	83.708	Notamacropus_eugenii
ENSEEUG00000012589	R3HDM1	91	85.055	ENSODEG00000008607	R3HDM1	100	79.402	Octodon_degus
ENSEEUG00000012589	R3HDM1	69	54.656	ENSONIG00000012017	r3hdm1	68	56.987	Oreochromis_niloticus
ENSEEUG00000012589	R3HDM1	89	79.079	ENSOANG00000007987	R3HDM1	92	77.941	Ornithorhynchus_anatinus
ENSEEUG00000012589	R3HDM1	80	85.055	ENSOCUG00000017366	R3HDM1	88	85.793	Oryctolagus_cuniculus
ENSEEUG00000012589	R3HDM1	86	92.683	ENSOGAG00000003136	R3HDM1	86	92.683	Otolemur_garnettii
ENSEEUG00000012589	R3HDM1	86	88.839	ENSOARG00000010788	R3HDM1	86	88.839	Ovis_aries
ENSEEUG00000012589	R3HDM1	91	87.061	ENSPPAG00000027858	R3HDM1	91	87.061	Pan_paniscus
ENSEEUG00000012589	R3HDM1	91	87.638	ENSPPRG00000002626	R3HDM1	91	88.007	Panthera_pardus
ENSEEUG00000012589	R3HDM1	91	87.823	ENSPTIG00000016581	R3HDM1	91	88.192	Panthera_tigris_altaica
ENSEEUG00000012589	R3HDM1	91	87.061	ENSPTRG00000012494	R3HDM1	91	87.061	Pan_troglodytes
ENSEEUG00000012589	R3HDM1	91	87.061	ENSPANG00000026448	R3HDM1	91	87.061	Papio_anubis
ENSEEUG00000012589	R3HDM1	68	64.410	ENSPKIG00000004328	r3hdm1	70	64.706	Paramormyrops_kingsleyae
ENSEEUG00000012589	R3HDM1	84	76.154	ENSPSIG00000012915	R3HDM1	87	75.138	Pelodiscus_sinensis
ENSEEUG00000012589	R3HDM1	89	83.591	ENSPEMG00000015187	R3hdm1	100	78.405	Peromyscus_maniculatus_bairdii
ENSEEUG00000012589	R3HDM1	51	52.146	ENSPMAG00000003369	-	66	51.702	Petromyzon_marinus
ENSEEUG00000012589	R3HDM1	84	81.081	ENSPCIG00000002491	R3HDM1	87	80.147	Phascolarctos_cinereus
ENSEEUG00000012589	R3HDM1	56	50.624	ENSPFOG00000015036	r3hdm1	59	50.980	Poecilia_formosa
ENSEEUG00000012589	R3HDM1	56	49.911	ENSPREG00000007902	r3hdm1	88	55.819	Poecilia_reticulata
ENSEEUG00000012589	R3HDM1	91	84.871	ENSPPYG00000012815	R3HDM1	91	84.871	Pongo_abelii
ENSEEUG00000012589	R3HDM1	91	76.087	ENSPCAG00000006208	R3HDM1	91	76.087	Procavia_capensis
ENSEEUG00000012589	R3HDM1	91	79.596	ENSPCOG00000012698	R3HDM1	84	96.250	Propithecus_coquereli
ENSEEUG00000012589	R3HDM1	74	94.085	ENSPVAG00000006098	R3HDM1	74	94.085	Pteropus_vampyrus
ENSEEUG00000012589	R3HDM1	68	60.652	ENSPNAG00000013952	r3hdm1	77	60.730	Pygocentrus_nattereri
ENSEEUG00000012589	R3HDM1	89	83.205	ENSRNOG00000004099	R3hdm1	88	81.919	Rattus_norvegicus
ENSEEUG00000012589	R3HDM1	89	85.049	ENSRBIG00000033317	R3HDM1	85	96.667	Rhinopithecus_bieti
ENSEEUG00000012589	R3HDM1	89	86.990	ENSRROG00000034534	R3HDM1	91	86.506	Rhinopithecus_roxellana
ENSEEUG00000012589	R3HDM1	91	86.506	ENSSBOG00000020389	R3HDM1	91	86.506	Saimiri_boliviensis_boliviensis
ENSEEUG00000012589	R3HDM1	84	78.049	ENSSHAG00000016999	R3HDM1	86	78.049	Sarcophilus_harrisii
ENSEEUG00000012589	R3HDM1	74	63.035	ENSSFOG00015014134	r3hdm1	76	62.476	Scleropages_formosus
ENSEEUG00000012589	R3HDM1	75	55.952	ENSSFOG00015019851	-	79	55.952	Scleropages_formosus
ENSEEUG00000012589	R3HDM1	72	51.456	ENSSMAG00000001669	r3hdm1	63	57.985	Scophthalmus_maximus
ENSEEUG00000012589	R3HDM1	53	52.581	ENSSDUG00000010749	r3hdm1	57	53.728	Seriola_dumerili
ENSEEUG00000012589	R3HDM1	71	52.581	ENSSLDG00000004499	r3hdm1	70	53.728	Seriola_lalandi_dorsalis
ENSEEUG00000012589	R3HDM1	58	90.756	ENSSARG00000000352	-	58	90.756	Sorex_araneus
ENSEEUG00000012589	R3HDM1	84	78.119	ENSSPUG00000004167	R3HDM1	87	76.838	Sphenodon_punctatus
ENSEEUG00000012589	R3HDM1	56	52.594	ENSSPAG00000004648	r3hdm1	58	54.789	Stegastes_partitus
ENSEEUG00000012589	R3HDM1	86	89.286	ENSSSCG00000015692	R3HDM1	86	89.286	Sus_scrofa
ENSEEUG00000012589	R3HDM1	85	71.875	ENSTGUG00000011750	R3HDM1	85	72.832	Taeniopygia_guttata
ENSEEUG00000012589	R3HDM1	79	93.714	ENSTTRG00000003935	R3HDM1	82	93.714	Tursiops_truncatus
ENSEEUG00000012589	R3HDM1	61	87.638	ENSUAMG00000024806	R3HDM1	99	85.424	Ursus_americanus
ENSEEUG00000012589	R3HDM1	83	92.453	ENSUMAG00000005552	R3HDM1	90	90.566	Ursus_maritimus
ENSEEUG00000012589	R3HDM1	81	92.982	ENSVPAG00000007333	R3HDM1	81	92.982	Vicugna_pacos
ENSEEUG00000012589	R3HDM1	91	86.691	ENSVVUG00000006457	R3HDM1	88	88.192	Vulpes_vulpes
ENSEEUG00000012589	R3HDM1	68	66.219	ENSXETG00000019330	r3hdm1	89	66.348	Xenopus_tropicalis
ENSEEUG00000012589	R3HDM1	53	51.032	ENSXMAG00000007885	r3hdm1	56	51.977	Xiphophorus_maculatus