EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000012609 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 4682 bases
Position: chrGeneScaffold_6400:3395-8076
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000011481	zf-C2H2	PF00096.26	1.5e-18	1	4
ENSEEUP00000011481	zf-C2H2	PF00096.26	1.5e-18	2	4
ENSEEUP00000011481	zf-C2H2	PF00096.26	1.5e-18	3	4
ENSEEUP00000011481	zf-C2H2	PF00096.26	1.5e-18	4	4
ENSEEUP00000011481	zf-met	PF12874.7	8.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000012597	-	675	-	ENSEEUP00000011481	224 (aa)	-	UPI0000F62E0F

Gene Model

Click here to download ENSEEUG00000012609's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000012609's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000012609	-	92	53.659	ENSEEUG00000009480	-	55	53.659
ENSEEUG00000012609	-	75	42.000	ENSEEUG00000010943	-	67	42.000
ENSEEUG00000012609	-	77	52.000	ENSEEUG00000013556	-	68	52.000
ENSEEUG00000012609	-	73	61.029	ENSEEUG00000013454	ZNF768	57	53.988
ENSEEUG00000012609	-	76	58.537	ENSEEUG00000008954	-	74	58.537
ENSEEUG00000012609	-	87	50.000	ENSEEUG00000008362	-	65	50.000
ENSEEUG00000012609	-	88	47.059	ENSEEUG00000012650	ZNF81	55	47.059
ENSEEUG00000012609	-	83	30.178	ENSEEUG00000006864	ZNF235	59	30.178
ENSEEUG00000012609	-	77	50.000	ENSEEUG00000008150	-	77	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000012609	-	90	52.941	ENSAPOG00000001296	gfi1b	63	52.941	Acanthochromis_polyacanthus
ENSEEUG00000012609	-	97	48.246	ENSACIG00000002190	gfi1b	75	48.246	Amphilophus_citrinellus
ENSEEUG00000012609	-	90	52.941	ENSAOCG00000021187	gfi1b	63	52.941	Amphiprion_ocellaris
ENSEEUG00000012609	-	90	52.941	ENSAPEG00000016196	gfi1b	66	52.941	Amphiprion_percula
ENSEEUG00000012609	-	100	50.220	ENSATEG00000002534	gfi1b	69	50.220	Anabas_testudineus
ENSEEUG00000012609	-	93	59.048	ENSAPLG00000003373	GFI1B	63	59.048	Anas_platyrhynchos
ENSEEUG00000012609	-	90	51.471	ENSACLG00000027053	gfi1b	63	51.471	Astatotilapia_calliptera
ENSEEUG00000012609	-	97	53.636	ENSAMXG00000037544	GFI1B	65	53.636	Astyanax_mexicanus
ENSEEUG00000012609	-	75	94.828	ENSCAPG00000010404	GFI1B	62	94.828	Cavia_aperea
ENSEEUG00000012609	-	100	57.965	ENSCPBG00000021186	GFI1B	66	57.965	Chrysemys_picta_bellii
ENSEEUG00000012609	-	97	50.909	ENSCSEG00000001315	gfi1b	68	50.909	Cynoglossus_semilaevis
ENSEEUG00000012609	-	90	53.431	ENSCVAG00000017168	gfi1b	66	53.431	Cyprinodon_variegatus
ENSEEUG00000012609	-	96	53.043	ENSDARG00000079947	gfi1b	97	53.043	Danio_rerio
ENSEEUG00000012609	-	97	51.948	ENSELUG00000016933	gfi1b	69	51.948	Esox_lucius
ENSEEUG00000012609	-	71	93.103	ENSFALG00000001479	GFI1B	58	93.103	Ficedula_albicollis
ENSEEUG00000012609	-	90	52.941	ENSFHEG00000015138	gfi1b	62	52.941	Fundulus_heteroclitus
ENSEEUG00000012609	-	64	91.379	ENSGMOG00000019123	gfi1b	74	91.379	Gadus_morhua
ENSEEUG00000012609	-	98	59.193	ENSGALG00000003478	GFI1B	66	59.193	Gallus_gallus
ENSEEUG00000012609	-	90	52.451	ENSGAFG00000003059	gfi1b	87	52.451	Gambusia_affinis
ENSEEUG00000012609	-	71	87.931	ENSGACG00000018134	gfi1b	61	87.931	Gasterosteus_aculeatus
ENSEEUG00000012609	-	100	58.407	ENSGAGG00000021327	GFI1B	68	58.407	Gopherus_agassizii
ENSEEUG00000012609	-	90	51.471	ENSHBUG00000005451	gfi1b	63	51.471	Haplochromis_burtoni
ENSEEUG00000012609	-	93	52.315	ENSHCOG00000013713	gfi1b	68	52.315	Hippocampus_comes
ENSEEUG00000012609	-	90	54.412	ENSIPUG00000012769	gfi1b	62	54.412	Ictalurus_punctatus
ENSEEUG00000012609	-	75	98.276	ENSJJAG00000016355	Gfi1b	61	98.276	Jaculus_jaculus
ENSEEUG00000012609	-	90	54.412	ENSKMAG00000016047	gfi1b	64	54.412	Kryptolebias_marmoratus
ENSEEUG00000012609	-	96	51.613	ENSLBEG00000020297	gfi1b	68	51.613	Labrus_bergylta
ENSEEUG00000012609	-	96	56.164	ENSLACG00000012207	GFI1B	67	56.164	Latimeria_chalumnae
ENSEEUG00000012609	-	90	54.412	ENSLOCG00000005750	gfi1b	61	54.412	Lepisosteus_oculatus
ENSEEUG00000012609	-	100	65.789	ENSLAFG00000022367	GFI1B	69	80.702	Loxodonta_africana
ENSEEUG00000012609	-	96	51.613	ENSMAMG00000003040	gfi1b	72	51.598	Mastacembelus_armatus
ENSEEUG00000012609	-	89	51.724	ENSMZEG00005015594	gfi1b	63	51.724	Maylandia_zebra
ENSEEUG00000012609	-	100	58.590	ENSMGAG00000006129	GFI1B	67	58.590	Meleagris_gallopavo
ENSEEUG00000012609	-	96	51.598	ENSMMOG00000011764	gfi1b	73	51.598	Mola_mola
ENSEEUG00000012609	-	75	94.828	ENSMODG00000012600	GFI1B	62	94.828	Monodelphis_domestica
ENSEEUG00000012609	-	83	55.615	ENSMALG00000004034	gfi1b	57	55.615	Monopterus_albus
ENSEEUG00000012609	-	75	98.276	ENSNGAG00000003333	Gfi1b	61	98.276	Nannospalax_galili
ENSEEUG00000012609	-	98	48.908	ENSNBRG00000012391	gfi1b	70	48.908	Neolamprologus_brichardi
ENSEEUG00000012609	-	76	90.909	ENSONIG00000013011	gfi1b	90	90.909	Oreochromis_niloticus
ENSEEUG00000012609	-	97	60.909	ENSOANG00000014723	GFI1B	68	60.909	Ornithorhynchus_anatinus
ENSEEUG00000012609	-	90	51.961	ENSORLG00020003719	GFI1B	66	51.961	Oryzias_latipes_hni
ENSEEUG00000012609	-	90	51.961	ENSORLG00015017142	gfi1b	63	51.961	Oryzias_latipes_hsok
ENSEEUG00000012609	-	90	52.941	ENSOMEG00000015149	GFI1B	64	52.941	Oryzias_melastigma
ENSEEUG00000012609	-	75	96.552	ENSOGAG00000008879	GFI1B	67	96.552	Otolemur_garnettii
ENSEEUG00000012609	-	90	54.146	ENSPKIG00000007643	gfi1b	61	54.146	Paramormyrops_kingsleyae
ENSEEUG00000012609	-	100	58.850	ENSPSIG00000012112	GFI1B	66	58.850	Pelodiscus_sinensis
ENSEEUG00000012609	-	79	56.497	ENSPMGG00000006021	gfi1b	59	55.435	Periophthalmus_magnuspinnatus
ENSEEUG00000012609	-	74	94.828	ENSPCIG00000019724	GFI1B	61	94.828	Phascolarctos_cinereus
ENSEEUG00000012609	-	90	52.941	ENSPFOG00000003460	gfi1b	61	52.941	Poecilia_formosa
ENSEEUG00000012609	-	90	52.941	ENSPLAG00000017181	GFI1B	60	52.941	Poecilia_latipinna
ENSEEUG00000012609	-	90	52.941	ENSPLAG00000021960	GFI1B	62	52.941	Poecilia_latipinna
ENSEEUG00000012609	-	89	53.465	ENSPMEG00000001556	GFI1B	62	53.465	Poecilia_mexicana
ENSEEUG00000012609	-	89	53.465	ENSPMEG00000019220	gfi1b	62	53.465	Poecilia_mexicana
ENSEEUG00000012609	-	100	50.220	ENSPREG00000021718	gfi1b	68	50.220	Poecilia_reticulata
ENSEEUG00000012609	-	90	51.471	ENSPNYG00000018422	gfi1b	64	51.471	Pundamilia_nyererei
ENSEEUG00000012609	-	90	55.392	ENSPNAG00000021118	gfi1b	62	55.392	Pygocentrus_nattereri
ENSEEUG00000012609	-	75	69.027	ENSSHAG00000006462	GFI1B	70	69.027	Sarcophilus_harrisii
ENSEEUG00000012609	-	96	50.917	ENSSMAG00000015181	gfi1b	69	50.917	Scophthalmus_maximus
ENSEEUG00000012609	-	90	53.922	ENSSDUG00000011604	gfi1b	62	53.922	Seriola_dumerili
ENSEEUG00000012609	-	90	53.431	ENSSLDG00000013823	gfi1b	62	53.431	Seriola_lalandi_dorsalis
ENSEEUG00000012609	-	90	53.431	ENSSPAG00000022914	gfi1b	63	53.431	Stegastes_partitus
ENSEEUG00000012609	-	77	93.103	ENSTGUG00000005282	-	100	93.103	Taeniopygia_guttata
ENSEEUG00000012609	-	90	51.471	ENSTRUG00000004525	gfi1b	62	51.471	Takifugu_rubripes
ENSEEUG00000012609	-	96	48.858	ENSTNIG00000003834	gfi1b	67	48.858	Tetraodon_nigroviridis
ENSEEUG00000012609	-	93	92.381	ENSTBEG00000014459	GFI1B	64	92.381	Tupaia_belangeri
ENSEEUG00000012609	-	93	54.245	ENSXETG00000006263	gfi1b	63	54.245	Xenopus_tropicalis
ENSEEUG00000012609	-	90	52.941	ENSXMAG00000027589	gfi1b	62	52.941	Xiphophorus_maculatus