EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000012739 (Gene tree)
Gene ID: -
Gene Symbol: TRPT1
Alias: -
Full Name: tRNA phosphotransferase 1
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 4029 bases
Position: chrGeneScaffold_6715:17549-21577
Accession: 103109482
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000011603	PTS_2-RNA	PF01885.16	1.7e-61	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000012734	TRPT1-201	759	XM_007518549	ENSEEUP00000011603	252 (aa)	XP_007518611	A0A1S2ZFK8

Gene Model

Click here to download ENSEEUG00000012739's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000012739's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000012739	TRPT1	100	84.524	ENSG00000149743	TRPT1	99	84.729	Homo_sapiens
ENSEEUG00000012739	TRPT1	81	60.287	ENSAPOG00000012925	trpt1	99	58.009	Acanthochromis_polyacanthus
ENSEEUG00000012739	TRPT1	100	83.730	ENSAMEG00000018040	TRPT1	99	83.730	Ailuropoda_melanoleuca
ENSEEUG00000012739	TRPT1	80	59.314	ENSACIG00000022413	trpt1	95	58.447	Amphilophus_citrinellus
ENSEEUG00000012739	TRPT1	81	59.903	ENSAOCG00000001163	trpt1	83	59.091	Amphiprion_ocellaris
ENSEEUG00000012739	TRPT1	81	59.903	ENSAPEG00000009873	trpt1	96	58.636	Amphiprion_percula
ENSEEUG00000012739	TRPT1	82	61.538	ENSATEG00000014371	trpt1	95	60.909	Anabas_testudineus
ENSEEUG00000012739	TRPT1	81	66.829	ENSACAG00000000696	TRPT1	95	66.822	Anolis_carolinensis
ENSEEUG00000012739	TRPT1	100	86.508	ENSANAG00000019580	TRPT1	99	86.508	Aotus_nancymaae
ENSEEUG00000012739	TRPT1	81	59.135	ENSACLG00000016893	trpt1	96	58.296	Astatotilapia_calliptera
ENSEEUG00000012739	TRPT1	80	58.621	ENSAMXG00000010533	trpt1	96	57.078	Astyanax_mexicanus
ENSEEUG00000012739	TRPT1	100	84.190	ENSBTAG00000016555	TRPT1	99	85.222	Bos_taurus
ENSEEUG00000012739	TRPT1	100	83.071	ENSCJAG00000018169	TRPT1	99	83.071	Callithrix_jacchus
ENSEEUG00000012739	TRPT1	100	84.706	ENSCAFG00000014591	TRPT1	99	85.098	Canis_familiaris
ENSEEUG00000012739	TRPT1	96	84.898	ENSCAFG00020014101	TRPT1	99	85.306	Canis_lupus_dingo
ENSEEUG00000012739	TRPT1	100	83.794	ENSCHIG00000021308	TRPT1	99	83.794	Capra_hircus
ENSEEUG00000012739	TRPT1	79	78.894	ENSTSYG00000026766	TRPT1	99	78.894	Carlito_syrichta
ENSEEUG00000012739	TRPT1	86	85.648	ENSCAPG00000016934	TRPT1	90	85.648	Cavia_aperea
ENSEEUG00000012739	TRPT1	100	80.556	ENSCPOG00000002923	TRPT1	100	80.556	Cavia_porcellus
ENSEEUG00000012739	TRPT1	79	85.427	ENSCCAG00000025683	TRPT1	99	85.427	Cebus_capucinus
ENSEEUG00000012739	TRPT1	100	83.071	ENSCATG00000031563	TRPT1	99	83.071	Cercocebus_atys
ENSEEUG00000012739	TRPT1	100	82.540	ENSCLAG00000016380	TRPT1	100	82.540	Chinchilla_lanigera
ENSEEUG00000012739	TRPT1	100	83.399	ENSCSAG00000006952	TRPT1	99	83.399	Chlorocebus_sabaeus
ENSEEUG00000012739	TRPT1	57	46.528	ENSCING00000002405	-	77	46.528	Ciona_intestinalis
ENSEEUG00000012739	TRPT1	77	38.384	ENSCING00000024241	-	91	37.054	Ciona_intestinalis
ENSEEUG00000012739	TRPT1	85	41.935	ENSCSAVG00000011071	-	67	41.935	Ciona_savignyi
ENSEEUG00000012739	TRPT1	83	41.121	ENSCSAVG00000003949	-	96	41.121	Ciona_savignyi
ENSEEUG00000012739	TRPT1	100	83.071	ENSCANG00000042980	TRPT1	99	83.071	Colobus_angolensis_palliatus
ENSEEUG00000012739	TRPT1	100	80.632	ENSCGRG00001008474	Trpt1	99	80.632	Cricetulus_griseus_chok1gshd
ENSEEUG00000012739	TRPT1	100	80.632	ENSCGRG00000009793	Trpt1	99	80.632	Cricetulus_griseus_crigri
ENSEEUG00000012739	TRPT1	82	59.809	ENSCSEG00000005840	trpt1	96	58.482	Cynoglossus_semilaevis
ENSEEUG00000012739	TRPT1	85	59.447	ENSCVAG00000006318	trpt1	99	59.447	Cyprinodon_variegatus
ENSEEUG00000012739	TRPT1	79	57.500	ENSDARG00000037628	trpt1	93	56.872	Danio_rerio
ENSEEUG00000012739	TRPT1	100	70.356	ENSDNOG00000044923	TRPT1	92	70.356	Dasypus_novemcinctus
ENSEEUG00000012739	TRPT1	96	80.083	ENSDORG00000001624	Trpt1	97	80.083	Dipodomys_ordii
ENSEEUG00000012739	TRPT1	82	40.670	FBgn0053057	CG33057	97	40.670	Drosophila_melanogaster
ENSEEUG00000012739	TRPT1	87	52.915	ENSEBUG00000012569	-	94	52.915	Eptatretus_burgeri
ENSEEUG00000012739	TRPT1	100	88.095	ENSEASG00005019983	TRPT1	99	88.095	Equus_asinus_asinus
ENSEEUG00000012739	TRPT1	100	86.508	ENSECAG00000009917	TRPT1	99	87.946	Equus_caballus
ENSEEUG00000012739	TRPT1	90	56.332	ENSELUG00000007385	trpt1	96	58.407	Esox_lucius
ENSEEUG00000012739	TRPT1	100	85.714	ENSFCAG00000024621	TRPT1	99	85.714	Felis_catus
ENSEEUG00000012739	TRPT1	100	82.143	ENSFDAG00000002738	TRPT1	100	82.143	Fukomys_damarensis
ENSEEUG00000012739	TRPT1	82	60.287	ENSFHEG00000002434	trpt1	98	59.211	Fundulus_heteroclitus
ENSEEUG00000012739	TRPT1	77	57.653	ENSGMOG00000008716	trpt1	95	57.653	Gadus_morhua
ENSEEUG00000012739	TRPT1	89	62.832	ENSGALG00000050256	TRPT1	76	62.832	Gallus_gallus
ENSEEUG00000012739	TRPT1	79	61.194	ENSGAFG00000016762	trpt1	96	59.535	Gambusia_affinis
ENSEEUG00000012739	TRPT1	80	57.921	ENSGACG00000016927	trpt1	95	56.744	Gasterosteus_aculeatus
ENSEEUG00000012739	TRPT1	100	85.317	ENSGGOG00000012163	TRPT1	99	85.317	Gorilla_gorilla
ENSEEUG00000012739	TRPT1	81	59.615	ENSHBUG00000012772	trpt1	96	58.744	Haplochromis_burtoni
ENSEEUG00000012739	TRPT1	100	82.540	ENSHGLG00000013748	TRPT1	100	82.540	Heterocephalus_glaber_female
ENSEEUG00000012739	TRPT1	100	82.540	ENSHGLG00100013048	TRPT1	100	82.540	Heterocephalus_glaber_male
ENSEEUG00000012739	TRPT1	82	56.731	ENSHCOG00000000218	trpt1	94	55.760	Hippocampus_comes
ENSEEUG00000012739	TRPT1	82	56.667	ENSIPUG00000002573	trpt1	96	57.207	Ictalurus_punctatus
ENSEEUG00000012739	TRPT1	100	82.540	ENSSTOG00000014285	TRPT1	99	82.540	Ictidomys_tridecemlineatus
ENSEEUG00000012739	TRPT1	100	82.540	ENSJJAG00000010855	Trpt1	100	82.540	Jaculus_jaculus
ENSEEUG00000012739	TRPT1	82	59.135	ENSKMAG00000004214	trpt1	96	58.182	Kryptolebias_marmoratus
ENSEEUG00000012739	TRPT1	81	59.223	ENSLBEG00000005640	trpt1	93	59.346	Labrus_bergylta
ENSEEUG00000012739	TRPT1	79	58.500	ENSLACG00000016922	TRPT1	90	56.422	Latimeria_chalumnae
ENSEEUG00000012739	TRPT1	82	62.019	ENSLOCG00000001345	trpt1	92	60.177	Lepisosteus_oculatus
ENSEEUG00000012739	TRPT1	100	82.540	ENSLAFG00000009075	TRPT1	99	82.540	Loxodonta_africana
ENSEEUG00000012739	TRPT1	100	83.071	ENSMFAG00000036828	TRPT1	99	83.071	Macaca_fascicularis
ENSEEUG00000012739	TRPT1	100	83.333	ENSMMUG00000012940	TRPT1	99	83.333	Macaca_mulatta
ENSEEUG00000012739	TRPT1	100	83.071	ENSMNEG00000033348	TRPT1	99	83.071	Macaca_nemestrina
ENSEEUG00000012739	TRPT1	100	83.071	ENSMLEG00000031438	TRPT1	99	83.071	Mandrillus_leucophaeus
ENSEEUG00000012739	TRPT1	81	59.903	ENSMAMG00000021617	trpt1	95	59.361	Mastacembelus_armatus
ENSEEUG00000012739	TRPT1	81	59.615	ENSMZEG00005004773	trpt1	96	58.744	Maylandia_zebra
ENSEEUG00000012739	TRPT1	77	81.538	ENSMAUG00000014107	Trpt1	94	81.538	Mesocricetus_auratus
ENSEEUG00000012739	TRPT1	100	84.127	ENSMICG00000016950	TRPT1	99	84.127	Microcebus_murinus
ENSEEUG00000012739	TRPT1	100	81.423	ENSMOCG00000021342	Trpt1	99	81.423	Microtus_ochrogaster
ENSEEUG00000012739	TRPT1	80	58.621	ENSMMOG00000002896	trpt1	91	58.140	Mola_mola
ENSEEUG00000012739	TRPT1	87	75.455	ENSMODG00000010226	TRPT1	100	75.455	Monodelphis_domestica
ENSEEUG00000012739	TRPT1	81	59.420	ENSMALG00000012208	trpt1	90	58.296	Monopterus_albus
ENSEEUG00000012739	TRPT1	100	79.447	MGP_CAROLIEiJ_G0022627	Trpt1	99	79.447	Mus_caroli
ENSEEUG00000012739	TRPT1	100	79.447	ENSMUSG00000047656	Trpt1	99	79.447	Mus_musculus
ENSEEUG00000012739	TRPT1	98	79.757	MGP_PahariEiJ_G0014121	Trpt1	97	79.757	Mus_pahari
ENSEEUG00000012739	TRPT1	100	78.656	MGP_SPRETEiJ_G0023537	Trpt1	99	78.656	Mus_spretus
ENSEEUG00000012739	TRPT1	100	82.540	ENSMPUG00000013272	TRPT1	92	82.540	Mustela_putorius_furo
ENSEEUG00000012739	TRPT1	91	87.773	ENSMLUG00000024858	TRPT1	98	86.992	Myotis_lucifugus
ENSEEUG00000012739	TRPT1	81	81.373	ENSNGAG00000007665	Trpt1	99	81.373	Nannospalax_galili
ENSEEUG00000012739	TRPT1	81	55.605	ENSNBRG00000001528	trpt1	96	55.508	Neolamprologus_brichardi
ENSEEUG00000012739	TRPT1	100	70.229	ENSNLEG00000033525	-	99	70.936	Nomascus_leucogenys
ENSEEUG00000012739	TRPT1	100	73.016	ENSMEUG00000000943	TRPT1	99	73.016	Notamacropus_eugenii
ENSEEUG00000012739	TRPT1	96	80.165	ENSOPRG00000015917	TRPT1	97	80.165	Ochotona_princeps
ENSEEUG00000012739	TRPT1	96	78.512	ENSODEG00000015724	TRPT1	98	78.512	Octodon_degus
ENSEEUG00000012739	TRPT1	81	58.654	ENSONIG00000005333	trpt1	95	58.371	Oreochromis_niloticus
ENSEEUG00000012739	TRPT1	80	67.647	ENSOANG00000010375	TRPT1	96	67.123	Ornithorhynchus_anatinus
ENSEEUG00000012739	TRPT1	99	82.329	ENSOCUG00000022244	TRPT1	99	82.329	Oryctolagus_cuniculus
ENSEEUG00000012739	TRPT1	84	60.563	ENSORLG00000025159	trpt1	95	60.563	Oryzias_latipes
ENSEEUG00000012739	TRPT1	86	62.100	ENSORLG00020018944	trpt1	97	62.100	Oryzias_latipes_hni
ENSEEUG00000012739	TRPT1	75	59.375	ENSORLG00015017108	trpt1	85	59.375	Oryzias_latipes_hsok
ENSEEUG00000012739	TRPT1	85	62.443	ENSOMEG00000018645	trpt1	98	62.443	Oryzias_melastigma
ENSEEUG00000012739	TRPT1	100	80.556	ENSOGAG00000007134	TRPT1	99	80.556	Otolemur_garnettii
ENSEEUG00000012739	TRPT1	100	84.980	ENSOARG00000004961	TRPT1	99	84.980	Ovis_aries
ENSEEUG00000012739	TRPT1	100	70.635	ENSPPAG00000027600	TRPT1	99	84.236	Pan_paniscus
ENSEEUG00000012739	TRPT1	100	71.825	ENSPPRG00000022870	TRPT1	99	84.729	Panthera_pardus
ENSEEUG00000012739	TRPT1	79	84.925	ENSPTIG00000018872	TRPT1	98	84.925	Panthera_tigris_altaica
ENSEEUG00000012739	TRPT1	100	70.635	ENSPTRG00000003822	TRPT1	99	84.236	Pan_troglodytes
ENSEEUG00000012739	TRPT1	100	82.283	ENSPANG00000011001	TRPT1	99	82.283	Papio_anubis
ENSEEUG00000012739	TRPT1	82	56.938	ENSPKIG00000008323	trpt1	97	55.310	Paramormyrops_kingsleyae
ENSEEUG00000012739	TRPT1	87	61.333	ENSPSIG00000009910	TRPT1	95	61.333	Pelodiscus_sinensis
ENSEEUG00000012739	TRPT1	87	55.405	ENSPMGG00000005037	trpt1	98	55.405	Periophthalmus_magnuspinnatus
ENSEEUG00000012739	TRPT1	100	77.866	ENSPEMG00000013720	Trpt1	99	77.866	Peromyscus_maniculatus_bairdii
ENSEEUG00000012739	TRPT1	81	58.454	ENSPMAG00000001449	trpt1	99	58.454	Petromyzon_marinus
ENSEEUG00000012739	TRPT1	94	71.429	ENSPCIG00000008060	TRPT1	96	71.429	Phascolarctos_cinereus
ENSEEUG00000012739	TRPT1	82	59.135	ENSPFOG00000009475	trpt1	98	57.658	Poecilia_formosa
ENSEEUG00000012739	TRPT1	82	59.135	ENSPMEG00000003682	trpt1	98	57.658	Poecilia_mexicana
ENSEEUG00000012739	TRPT1	82	59.615	ENSPREG00000015408	trpt1	98	57.965	Poecilia_reticulata
ENSEEUG00000012739	TRPT1	100	85.714	ENSPPYG00000003116	TRPT1	99	85.714	Pongo_abelii
ENSEEUG00000012739	TRPT1	99	81.124	ENSPCAG00000000762	TRPT1	99	81.124	Procavia_capensis
ENSEEUG00000012739	TRPT1	100	82.143	ENSPCOG00000010370	TRPT1	99	82.143	Propithecus_coquereli
ENSEEUG00000012739	TRPT1	58	84.211	ENSPVAG00000017109	-	58	84.211	Pteropus_vampyrus
ENSEEUG00000012739	TRPT1	81	55.157	ENSPNYG00000014805	trpt1	96	54.622	Pundamilia_nyererei
ENSEEUG00000012739	TRPT1	81	58.173	ENSPNAG00000008548	trpt1	96	57.727	Pygocentrus_nattereri
ENSEEUG00000012739	TRPT1	100	78.656	ENSRNOG00000023023	Trpt1	100	78.656	Rattus_norvegicus
ENSEEUG00000012739	TRPT1	100	82.937	ENSRBIG00000040432	TRPT1	99	82.937	Rhinopithecus_bieti
ENSEEUG00000012739	TRPT1	100	83.730	ENSRROG00000044905	TRPT1	99	83.730	Rhinopithecus_roxellana
ENSEEUG00000012739	TRPT1	70	40.541	YOL102C	TPT1	80	40.541	Saccharomyces_cerevisiae
ENSEEUG00000012739	TRPT1	100	86.111	ENSSBOG00000021466	TRPT1	99	86.111	Saimiri_boliviensis_boliviensis
ENSEEUG00000012739	TRPT1	82	56.459	ENSSFOG00015005844	trpt1	99	54.667	Scleropages_formosus
ENSEEUG00000012739	TRPT1	81	58.454	ENSSMAG00000017744	trpt1	95	58.065	Scophthalmus_maximus
ENSEEUG00000012739	TRPT1	81	58.937	ENSSDUG00000017106	trpt1	97	58.182	Seriola_dumerili
ENSEEUG00000012739	TRPT1	80	58.621	ENSSLDG00000015957	trpt1	88	58.537	Seriola_lalandi_dorsalis
ENSEEUG00000012739	TRPT1	54	92.593	ENSSARG00000011737	-	60	92.593	Sorex_araneus
ENSEEUG00000012739	TRPT1	76	56.477	ENSSPAG00000007557	trpt1	76	56.477	Stegastes_partitus
ENSEEUG00000012739	TRPT1	94	86.134	ENSSSCG00000013040	TRPT1	91	86.134	Sus_scrofa
ENSEEUG00000012739	TRPT1	81	58.454	ENSTRUG00000023723	trpt1	96	56.757	Takifugu_rubripes
ENSEEUG00000012739	TRPT1	82	57.212	ENSTNIG00000003381	trpt1	98	54.825	Tetraodon_nigroviridis
ENSEEUG00000012739	TRPT1	100	80.159	ENSTBEG00000006023	TRPT1	99	80.159	Tupaia_belangeri
ENSEEUG00000012739	TRPT1	100	83.730	ENSTTRG00000010252	TRPT1	99	83.730	Tursiops_truncatus
ENSEEUG00000012739	TRPT1	100	83.730	ENSUAMG00000015208	TRPT1	99	83.730	Ursus_americanus
ENSEEUG00000012739	TRPT1	100	83.730	ENSUMAG00000001410	TRPT1	99	83.730	Ursus_maritimus
ENSEEUG00000012739	TRPT1	96	85.950	ENSVVUG00000029774	TRPT1	99	85.950	Vulpes_vulpes
ENSEEUG00000012739	TRPT1	88	60.714	ENSXETG00000007196	trpt1	96	60.714	Xenopus_tropicalis
ENSEEUG00000012739	TRPT1	78	59.296	ENSXCOG00000001614	trpt1	93	58.216	Xiphophorus_couchianus
ENSEEUG00000012739	TRPT1	81	58.454	ENSXMAG00000003142	trpt1	99	57.014	Xiphophorus_maculatus