EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000012925 (Gene tree)
Gene ID: -
Gene Symbol: GPATCH1
Alias: ECGP|FLJ10206|FLJ38686|GPATC1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 87126 bases
Position: chrGeneScaffold_819:255-87380
Accession: 24658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000011799	DUF1604	PF07713.13	1.1e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000012952	GPATCH1-201	2793	-	ENSEEUP00000011799	930 (aa)	-	UPI0000F63242

Gene Model

Click here to download ENSEEUG00000012925's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000012925's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000012925	GPATCH1	78	79.902	ENSG00000076650	GPATCH1	78	94.000	Homo_sapiens
ENSEEUG00000012925	GPATCH1	78	78.922	ENSAMEG00000015575	GPATCH1	78	78.922	Ailuropoda_melanoleuca
ENSEEUG00000012925	GPATCH1	67	65.101	ENSAOCG00000006668	gpatch1	62	65.101	Amphiprion_ocellaris
ENSEEUG00000012925	GPATCH1	73	54.455	ENSAPEG00000000026	gpatch1	72	54.455	Amphiprion_percula
ENSEEUG00000012925	GPATCH1	72	53.886	ENSATEG00000014494	gpatch1	73	53.960	Anabas_testudineus
ENSEEUG00000012925	GPATCH1	71	65.027	ENSAPLG00000007584	GPATCH1	76	65.027	Anas_platyrhynchos
ENSEEUG00000012925	GPATCH1	78	78.431	ENSANAG00000027002	GPATCH1	78	78.431	Aotus_nancymaae
ENSEEUG00000012925	GPATCH1	72	55.838	ENSACLG00000024740	gpatch1	71	56.436	Astatotilapia_calliptera
ENSEEUG00000012925	GPATCH1	73	56.373	ENSAMXG00000020177	gpatch1	77	56.373	Astyanax_mexicanus
ENSEEUG00000012925	GPATCH1	78	78.922	ENSBTAG00000000721	GPATCH1	78	78.922	Bos_taurus
ENSEEUG00000012925	GPATCH1	78	78.431	ENSCJAG00000000684	GPATCH1	78	78.431	Callithrix_jacchus
ENSEEUG00000012925	GPATCH1	78	79.412	ENSCAFG00000007457	GPATCH1	65	79.412	Canis_familiaris
ENSEEUG00000012925	GPATCH1	78	79.412	ENSCAFG00020019731	GPATCH1	78	79.412	Canis_lupus_dingo
ENSEEUG00000012925	GPATCH1	78	78.922	ENSCHIG00000019626	GPATCH1	79	78.922	Capra_hircus
ENSEEUG00000012925	GPATCH1	64	95.868	ENSCAPG00000008827	GPATCH1	66	95.868	Cavia_aperea
ENSEEUG00000012925	GPATCH1	72	78.392	ENSCPOG00000024477	GPATCH1	73	78.431	Cavia_porcellus
ENSEEUG00000012925	GPATCH1	78	77.941	ENSCCAG00000024676	GPATCH1	78	77.941	Cebus_capucinus
ENSEEUG00000012925	GPATCH1	78	79.412	ENSCATG00000043637	GPATCH1	78	93.000	Cercocebus_atys
ENSEEUG00000012925	GPATCH1	70	77.586	ENSCLAG00000003395	-	78	77.586	Chinchilla_lanigera
ENSEEUG00000012925	GPATCH1	78	79.412	ENSCSAG00000004743	GPATCH1	78	79.412	Chlorocebus_sabaeus
ENSEEUG00000012925	GPATCH1	65	70.149	ENSCHOG00000012865	GPATCH1	70	70.149	Choloepus_hoffmanni
ENSEEUG00000012925	GPATCH1	69	67.262	ENSCPBG00000000666	GPATCH1	81	68.000	Chrysemys_picta_bellii
ENSEEUG00000012925	GPATCH1	63	80.488	ENSCANG00000012540	GPATCH1	68	80.488	Colobus_angolensis_palliatus
ENSEEUG00000012925	GPATCH1	70	78.161	ENSCGRG00001016736	Gpatch1	74	78.161	Cricetulus_griseus_chok1gshd
ENSEEUG00000012925	GPATCH1	75	71.585	ENSCGRG00000005069	Gpatch1	79	71.585	Cricetulus_griseus_crigri
ENSEEUG00000012925	GPATCH1	60	47.716	ENSCSEG00000019456	-	84	60.550	Cynoglossus_semilaevis
ENSEEUG00000012925	GPATCH1	66	65.753	ENSDARG00000033418	gpatch1	72	52.709	Danio_rerio
ENSEEUG00000012925	GPATCH1	78	78.431	ENSDNOG00000005291	GPATCH1	81	78.431	Dasypus_novemcinctus
ENSEEUG00000012925	GPATCH1	77	77.451	ENSDORG00000012546	Gpatch1	80	77.451	Dipodomys_ordii
ENSEEUG00000012925	GPATCH1	77	72.549	ENSETEG00000003626	GPATCH1	78	72.549	Echinops_telfairi
ENSEEUG00000012925	GPATCH1	63	51.974	ENSEBUG00000011286	gpatch1	61	51.974	Eptatretus_burgeri
ENSEEUG00000012925	GPATCH1	78	78.922	ENSEASG00005021162	GPATCH1	83	78.922	Equus_asinus_asinus
ENSEEUG00000012925	GPATCH1	77	79.412	ENSECAG00000022743	GPATCH1	75	79.412	Equus_caballus
ENSEEUG00000012925	GPATCH1	61	65.772	ENSELUG00000018195	gpatch1	65	52.970	Esox_lucius
ENSEEUG00000012925	GPATCH1	71	83.539	ENSFCAG00000014917	GPATCH1	72	83.539	Felis_catus
ENSEEUG00000012925	GPATCH1	70	66.162	ENSFALG00000007821	GPATCH1	71	66.667	Ficedula_albicollis
ENSEEUG00000012925	GPATCH1	70	79.330	ENSFDAG00000003871	GPATCH1	77	79.330	Fukomys_damarensis
ENSEEUG00000012925	GPATCH1	70	64.609	ENSGALG00000004839	GPATCH1	68	64.878	Gallus_gallus
ENSEEUG00000012925	GPATCH1	67	63.333	ENSGACG00000017544	gpatch1	69	63.333	Gasterosteus_aculeatus
ENSEEUG00000012925	GPATCH1	73	66.019	ENSGAGG00000010067	GPATCH1	73	66.019	Gopherus_agassizii
ENSEEUG00000012925	GPATCH1	75	78.212	ENSGGOG00000010862	GPATCH1	77	78.212	Gorilla_gorilla
ENSEEUG00000012925	GPATCH1	72	56.345	ENSHBUG00000023462	gpatch1	72	56.931	Haplochromis_burtoni
ENSEEUG00000012925	GPATCH1	77	77.941	ENSHGLG00000009334	GPATCH1	77	77.941	Heterocephalus_glaber_female
ENSEEUG00000012925	GPATCH1	77	78.431	ENSHGLG00100018074	GPATCH1	77	78.431	Heterocephalus_glaber_male
ENSEEUG00000012925	GPATCH1	66	55.051	ENSIPUG00000014977	gpatch1	66	55.051	Ictalurus_punctatus
ENSEEUG00000012925	GPATCH1	78	76.961	ENSSTOG00000003720	GPATCH1	78	76.961	Ictidomys_tridecemlineatus
ENSEEUG00000012925	GPATCH1	77	77.451	ENSJJAG00000023765	Gpatch1	78	77.451	Jaculus_jaculus
ENSEEUG00000012925	GPATCH1	73	53.960	ENSKMAG00000017950	gpatch1	73	53.960	Kryptolebias_marmoratus
ENSEEUG00000012925	GPATCH1	72	52.284	ENSLBEG00000026527	gpatch1	70	52.970	Labrus_bergylta
ENSEEUG00000012925	GPATCH1	69	62.500	ENSLACG00000008130	GPATCH1	71	62.500	Latimeria_chalumnae
ENSEEUG00000012925	GPATCH1	73	61.275	ENSLOCG00000001800	gpatch1	72	61.275	Lepisosteus_oculatus
ENSEEUG00000012925	GPATCH1	78	78.431	ENSLAFG00000013589	GPATCH1	83	78.431	Loxodonta_africana
ENSEEUG00000012925	GPATCH1	78	79.412	ENSMFAG00000034418	GPATCH1	78	93.000	Macaca_fascicularis
ENSEEUG00000012925	GPATCH1	78	79.902	ENSMMUG00000011790	GPATCH1	78	94.000	Macaca_mulatta
ENSEEUG00000012925	GPATCH1	78	77.451	ENSMNEG00000045084	GPATCH1	78	89.000	Macaca_nemestrina
ENSEEUG00000012925	GPATCH1	66	70.192	ENSMLEG00000043840	GPATCH1	69	70.192	Mandrillus_leucophaeus
ENSEEUG00000012925	GPATCH1	72	55.838	ENSMZEG00005001926	gpatch1	71	56.436	Maylandia_zebra
ENSEEUG00000012925	GPATCH1	65	65.306	ENSMGAG00000005775	GPATCH1	65	65.306	Meleagris_gallopavo
ENSEEUG00000012925	GPATCH1	74	68.627	ENSMICG00000004829	GPATCH1	76	68.627	Microcebus_murinus
ENSEEUG00000012925	GPATCH1	78	79.902	ENSMOCG00000000174	Gpatch1	78	79.902	Microtus_ochrogaster
ENSEEUG00000012925	GPATCH1	70	52.551	ENSMMOG00000002140	gpatch1	80	52.941	Mola_mola
ENSEEUG00000012925	GPATCH1	73	75.490	ENSMODG00000012226	GPATCH1	76	75.490	Monodelphis_domestica
ENSEEUG00000012925	GPATCH1	72	53.807	ENSMALG00000014386	gpatch1	73	54.455	Monopterus_albus
ENSEEUG00000012925	GPATCH1	77	76.884	ENSMUSG00000063808	Gpatch1	100	89.796	Mus_musculus
ENSEEUG00000012925	GPATCH1	77	77.387	MGP_PahariEiJ_G0012816	Gpatch1	100	90.816	Mus_pahari
ENSEEUG00000012925	GPATCH1	77	77.387	MGP_SPRETEiJ_G0030681	Gpatch1	100	90.816	Mus_spretus
ENSEEUG00000012925	GPATCH1	77	78.922	ENSMPUG00000007658	GPATCH1	77	78.922	Mustela_putorius_furo
ENSEEUG00000012925	GPATCH1	76	80.392	ENSMLUG00000012161	GPATCH1	78	80.392	Myotis_lucifugus
ENSEEUG00000012925	GPATCH1	77	77.451	ENSNGAG00000012455	Gpatch1	77	77.451	Nannospalax_galili
ENSEEUG00000012925	GPATCH1	78	79.902	ENSNLEG00000007659	GPATCH1	78	94.000	Nomascus_leucogenys
ENSEEUG00000012925	GPATCH1	68	52.847	ENSMEUG00000015174	GPATCH1	69	53.431	Notamacropus_eugenii
ENSEEUG00000012925	GPATCH1	72	78.173	ENSODEG00000007103	GPATCH1	77	78.431	Octodon_degus
ENSEEUG00000012925	GPATCH1	72	55.330	ENSONIG00000003302	gpatch1	74	55.392	Oreochromis_niloticus
ENSEEUG00000012925	GPATCH1	76	72.396	ENSOANG00000012732	GPATCH1	77	73.367	Ornithorhynchus_anatinus
ENSEEUG00000012925	GPATCH1	77	79.412	ENSOCUG00000015905	GPATCH1	77	79.412	Oryctolagus_cuniculus
ENSEEUG00000012925	GPATCH1	72	52.500	ENSORLG00000018706	gpatch1	72	52.451	Oryzias_latipes
ENSEEUG00000012925	GPATCH1	65	53.000	ENSOMEG00000022688	gpatch1	73	52.941	Oryzias_melastigma
ENSEEUG00000012925	GPATCH1	76	77.889	ENSOGAG00000004016	GPATCH1	90	77.941	Otolemur_garnettii
ENSEEUG00000012925	GPATCH1	77	78.680	ENSOARG00000004365	GPATCH1	77	78.680	Ovis_aries
ENSEEUG00000012925	GPATCH1	78	78.922	ENSPPAG00000020990	GPATCH1	78	93.069	Pan_paniscus
ENSEEUG00000012925	GPATCH1	71	84.362	ENSPPRG00000017245	GPATCH1	72	84.362	Panthera_pardus
ENSEEUG00000012925	GPATCH1	78	79.902	ENSPTIG00000019649	GPATCH1	78	79.902	Panthera_tigris_altaica
ENSEEUG00000012925	GPATCH1	78	79.412	ENSPTRG00000010803	GPATCH1	78	94.000	Pan_troglodytes
ENSEEUG00000012925	GPATCH1	78	79.412	ENSPANG00000012374	GPATCH1	78	93.000	Papio_anubis
ENSEEUG00000012925	GPATCH1	71	54.974	ENSPKIG00000020745	gpatch1	72	55.612	Paramormyrops_kingsleyae
ENSEEUG00000012925	GPATCH1	66	64.677	ENSPSIG00000013433	GPATCH1	65	64.677	Pelodiscus_sinensis
ENSEEUG00000012925	GPATCH1	77	78.431	ENSPEMG00000000636	Gpatch1	77	78.431	Peromyscus_maniculatus_bairdii
ENSEEUG00000012925	GPATCH1	78	75.980	ENSPCIG00000021003	GPATCH1	81	75.980	Phascolarctos_cinereus
ENSEEUG00000012925	GPATCH1	78	79.412	ENSPPYG00000009824	GPATCH1	77	79.412	Pongo_abelii
ENSEEUG00000012925	GPATCH1	69	90.769	ENSPCAG00000005931	GPATCH1	70	90.789	Procavia_capensis
ENSEEUG00000012925	GPATCH1	76	79.902	ENSPCOG00000009674	GPATCH1	81	79.902	Propithecus_coquereli
ENSEEUG00000012925	GPATCH1	64	95.364	ENSPVAG00000017767	GPATCH1	64	95.364	Pteropus_vampyrus
ENSEEUG00000012925	GPATCH1	72	56.345	ENSPNYG00000018189	gpatch1	79	56.931	Pundamilia_nyererei
ENSEEUG00000012925	GPATCH1	73	54.902	ENSPNAG00000013187	gpatch1	73	54.902	Pygocentrus_nattereri
ENSEEUG00000012925	GPATCH1	77	78.431	ENSRNOG00000011584	Gpatch1	77	78.431	Rattus_norvegicus
ENSEEUG00000012925	GPATCH1	78	69.808	ENSRBIG00000034723	GPATCH1	78	69.808	Rhinopithecus_bieti
ENSEEUG00000012925	GPATCH1	78	78.431	ENSRROG00000024428	GPATCH1	78	92.000	Rhinopithecus_roxellana
ENSEEUG00000012925	GPATCH1	78	77.941	ENSSBOG00000034650	GPATCH1	78	77.941	Saimiri_boliviensis_boliviensis
ENSEEUG00000012925	GPATCH1	78	75.000	ENSSHAG00000016016	GPATCH1	77	75.000	Sarcophilus_harrisii
ENSEEUG00000012925	GPATCH1	72	54.271	ENSSFOG00015011535	gpatch1	72	54.902	Scleropages_formosus
ENSEEUG00000012925	GPATCH1	66	50.761	ENSSMAG00000002883	gpatch1	70	51.485	Scophthalmus_maximus
ENSEEUG00000012925	GPATCH1	72	53.202	ENSSDUG00000007444	gpatch1	72	53.846	Seriola_dumerili
ENSEEUG00000012925	GPATCH1	72	54.315	ENSSLDG00000002856	gpatch1	80	53.365	Seriola_lalandi_dorsalis
ENSEEUG00000012925	GPATCH1	64	77.451	ENSSARG00000004108	GPATCH1	63	77.451	Sorex_araneus
ENSEEUG00000012925	GPATCH1	77	78.392	ENSSSCG00000002865	GPATCH1	80	78.431	Sus_scrofa
ENSEEUG00000012925	GPATCH1	76	66.332	ENSTGUG00000009401	GPATCH1	74	66.829	Taeniopygia_guttata
ENSEEUG00000012925	GPATCH1	72	53.535	ENSTRUG00000005785	-	72	53.922	Takifugu_rubripes
ENSEEUG00000012925	GPATCH1	72	53.535	ENSTRUG00000025081	gpatch1	72	53.922	Takifugu_rubripes
ENSEEUG00000012925	GPATCH1	66	53.731	ENSTNIG00000002554	gpatch1	79	54.369	Tetraodon_nigroviridis
ENSEEUG00000012925	GPATCH1	72	77.941	ENSTTRG00000012221	GPATCH1	72	77.941	Tursiops_truncatus
ENSEEUG00000012925	GPATCH1	78	79.412	ENSUMAG00000014645	GPATCH1	79	92.857	Ursus_maritimus
ENSEEUG00000012925	GPATCH1	72	95.364	ENSVPAG00000010313	GPATCH1	77	95.364	Vicugna_pacos
ENSEEUG00000012925	GPATCH1	78	78.922	ENSVVUG00000016572	GPATCH1	78	78.922	Vulpes_vulpes
ENSEEUG00000012925	GPATCH1	65	53.846	ENSXETG00000018276	gpatch1	73	50.000	Xenopus_tropicalis