EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000012973 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 1036 bases
Position: chrGeneScaffold_1420:4382-5417
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000011797	RRM_1	PF00076.22	7.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000012950	-	882	-	ENSEEUP00000011797	293 (aa)	-	UPI0000F616FC

Gene Model

Click here to download ENSEEUG00000012973's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000012973's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000012973	-	60	47.486	ENSEEUG00000004747	PABPN1L	59	53.793

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000012973	-	72	93.365	ENSG00000100836	PABPN1	97	91.398	Homo_sapiens
ENSEEUG00000012973	-	72	84.977	ENSG00000258643	BCL2L2-PABPN1	57	93.651	Homo_sapiens
ENSEEUG00000012973	-	69	78.325	ENSAPOG00000016425	pabpn1	86	80.097	Acanthochromis_polyacanthus
ENSEEUG00000012973	-	64	93.651	ENSAMEG00000007048	BCL2L2-PABPN1	100	93.651	Ailuropoda_melanoleuca
ENSEEUG00000012973	-	66	80.000	ENSACIG00000021744	pabpn1	94	79.167	Amphilophus_citrinellus
ENSEEUG00000012973	-	71	76.077	ENSAOCG00000015805	pabpn1	86	80.097	Amphiprion_ocellaris
ENSEEUG00000012973	-	71	76.077	ENSAPEG00000009623	pabpn1	86	80.097	Amphiprion_percula
ENSEEUG00000012973	-	71	76.077	ENSATEG00000020531	pabpn1	86	80.097	Anabas_testudineus
ENSEEUG00000012973	-	69	81.281	ENSACAG00000006185	-	74	84.689	Anolis_carolinensis
ENSEEUG00000012973	-	68	93.467	ENSANAG00000024513	-	74	93.171	Aotus_nancymaae
ENSEEUG00000012973	-	66	79.592	ENSACLG00000016374	pabpn1	65	79.793	Astatotilapia_calliptera
ENSEEUG00000012973	-	69	79.803	ENSAMXG00000000452	pabpn1	94	80.952	Astyanax_mexicanus
ENSEEUG00000012973	-	59	92.529	ENSBTAG00000050594	-	89	76.062	Bos_taurus
ENSEEUG00000012973	-	65	92.147	ENSBTAG00000053753	-	71	92.147	Bos_taurus
ENSEEUG00000012973	-	72	92.453	ENSBTAG00000006884	PABPN1	93	90.493	Bos_taurus
ENSEEUG00000012973	-	57	91.018	ENSCJAG00000004407	-	84	91.018	Callithrix_jacchus
ENSEEUG00000012973	-	97	76.125	ENSCJAG00000007960	-	93	91.197	Callithrix_jacchus
ENSEEUG00000012973	-	77	92.035	ENSCAFG00000011482	PABPN1	93	88.380	Canis_familiaris
ENSEEUG00000012973	-	72	93.365	ENSCAFG00020006651	-	93	91.197	Canis_lupus_dingo
ENSEEUG00000012973	-	72	93.365	ENSCAFG00020007298	-	93	91.197	Canis_lupus_dingo
ENSEEUG00000012973	-	72	92.925	ENSCHIG00000012184	PABPN1	93	90.845	Capra_hircus
ENSEEUG00000012973	-	64	93.651	ENSTSYG00000033996	BCL2L2-PABPN1	94	92.814	Carlito_syrichta
ENSEEUG00000012973	-	72	93.396	ENSCPOG00000025574	PABPN1	93	90.845	Cavia_porcellus
ENSEEUG00000012973	-	97	76.125	ENSCCAG00000033954	BCL2L2-PABPN1	93	91.197	Cebus_capucinus
ENSEEUG00000012973	-	97	76.125	ENSCATG00000038536	BCL2L2-PABPN1	93	91.197	Cercocebus_atys
ENSEEUG00000012973	-	70	74.146	ENSCLAG00000012423	PABPN1	92	76.056	Chinchilla_lanigera
ENSEEUG00000012973	-	70	91.707	ENSCSAG00000016036	PABPN1	93	89.437	Chlorocebus_sabaeus
ENSEEUG00000012973	-	67	85.644	ENSCHOG00000004798	BCL2L2-PABPN1	87	85.644	Choloepus_hoffmanni
ENSEEUG00000012973	-	57	89.222	ENSCPBG00000026060	-	94	89.222	Chrysemys_picta_bellii
ENSEEUG00000012973	-	68	63.000	ENSCING00000012468	-	84	64.000	Ciona_intestinalis
ENSEEUG00000012973	-	60	58.757	ENSCSAVG00000002001	-	93	60.241	Ciona_savignyi
ENSEEUG00000012973	-	64	93.651	ENSCANG00000009750	BCL2L2-PABPN1	94	92.814	Colobus_angolensis_palliatus
ENSEEUG00000012973	-	99	73.559	ENSCANG00000030980	-	74	78.049	Colobus_angolensis_palliatus
ENSEEUG00000012973	-	72	93.365	ENSCGRG00001019696	Pabpn1	94	92.814	Cricetulus_griseus_chok1gshd
ENSEEUG00000012973	-	57	92.814	ENSCGRG00000011102	Pabpn1	91	97.279	Cricetulus_griseus_crigri
ENSEEUG00000012973	-	66	80.829	ENSCSEG00000008774	pabpn1	86	80.097	Cynoglossus_semilaevis
ENSEEUG00000012973	-	71	78.947	ENSCVAG00000003152	pabpn1	86	79.126	Cyprinodon_variegatus
ENSEEUG00000012973	-	50	58.219	ENSDARG00000087996	pabpn1l	72	63.866	Danio_rerio
ENSEEUG00000012973	-	69	79.310	ENSDARG00000045373	pabpn1	86	81.068	Danio_rerio
ENSEEUG00000012973	-	72	93.365	ENSDNOG00000023682	PABPN1	93	91.197	Dasypus_novemcinctus
ENSEEUG00000012973	-	72	93.839	ENSDORG00000028966	-	93	91.901	Dipodomys_ordii
ENSEEUG00000012973	-	60	70.621	ENSDORG00000023928	-	92	69.277	Dipodomys_ordii
ENSEEUG00000012973	-	65	62.632	FBgn0005648	Pabp2	82	62.632	Drosophila_melanogaster
ENSEEUG00000012973	-	74	70.320	ENSEBUG00000002322	pabpn1	83	76.804	Eptatretus_burgeri
ENSEEUG00000012973	-	72	93.365	ENSEASG00005011716	PABPN1	93	91.197	Equus_asinus_asinus
ENSEEUG00000012973	-	70	93.720	ENSECAG00000011652	PABPN1	92	91.544	Equus_caballus
ENSEEUG00000012973	-	71	78.947	ENSELUG00000022654	pabpn1	85	83.010	Esox_lucius
ENSEEUG00000012973	-	72	93.365	ENSFCAG00000031922	PABPN1	93	91.197	Felis_catus
ENSEEUG00000012973	-	57	92.216	ENSFDAG00000018381	BCL2L2-PABPN1	94	92.216	Fukomys_damarensis
ENSEEUG00000012973	-	71	73.684	ENSFHEG00000007215	pabpn1	86	77.670	Fundulus_heteroclitus
ENSEEUG00000012973	-	69	79.310	ENSGMOG00000003922	pabpn1	68	79.500	Gadus_morhua
ENSEEUG00000012973	-	66	82.051	ENSGALG00000052930	-	60	87.379	Gallus_gallus
ENSEEUG00000012973	-	71	75.714	ENSGAFG00000017099	pabpn1	86	79.710	Gambusia_affinis
ENSEEUG00000012973	-	69	76.355	ENSGACG00000002167	pabpn1	87	75.688	Gasterosteus_aculeatus
ENSEEUG00000012973	-	95	75.000	ENSGGOG00000025919	-	98	77.703	Gorilla_gorilla
ENSEEUG00000012973	-	75	75.455	ENSGGOG00000039675	-	76	76.098	Gorilla_gorilla
ENSEEUG00000012973	-	97	76.125	ENSGGOG00000022683	-	93	91.197	Gorilla_gorilla
ENSEEUG00000012973	-	71	76.077	ENSHBUG00000019523	pabpn1	86	80.097	Haplochromis_burtoni
ENSEEUG00000012973	-	94	71.014	ENSHGLG00000018588	-	71	77.725	Heterocephalus_glaber_female
ENSEEUG00000012973	-	57	71.257	ENSHGLG00000009842	-	93	71.257	Heterocephalus_glaber_female
ENSEEUG00000012973	-	72	93.396	ENSHGLG00000002927	-	92	96.599	Heterocephalus_glaber_female
ENSEEUG00000012973	-	57	81.871	ENSHGLG00100018935	-	94	81.871	Heterocephalus_glaber_male
ENSEEUG00000012973	-	60	93.785	ENSHGLG00100006673	-	92	96.599	Heterocephalus_glaber_male
ENSEEUG00000012973	-	95	65.233	ENSHGLG00100015565	-	73	77.725	Heterocephalus_glaber_male
ENSEEUG00000012973	-	71	80.769	ENSHCOG00000004655	pabpn1	86	80.976	Hippocampus_comes
ENSEEUG00000012973	-	71	72.857	ENSIPUG00000000180	-	93	75.234	Ictalurus_punctatus
ENSEEUG00000012973	-	71	76.555	ENSIPUG00000008085	PABPN1	86	80.583	Ictalurus_punctatus
ENSEEUG00000012973	-	57	92.814	ENSSTOG00000029847	BCL2L2-PABPN1	94	92.814	Ictidomys_tridecemlineatus
ENSEEUG00000012973	-	57	92.814	ENSJJAG00000023507	Gm20521	94	92.814	Jaculus_jaculus
ENSEEUG00000012973	-	68	80.402	ENSKMAG00000018748	pabpn1	86	79.227	Kryptolebias_marmoratus
ENSEEUG00000012973	-	69	78.325	ENSLBEG00000027266	pabpn1	86	80.097	Labrus_bergylta
ENSEEUG00000012973	-	60	84.270	ENSLACG00000000646	pabpn1	83	81.675	Latimeria_chalumnae
ENSEEUG00000012973	-	71	61.722	ENSLOCG00000004694	pabpn1l	95	62.136	Lepisosteus_oculatus
ENSEEUG00000012973	-	71	78.365	ENSLOCG00000000796	pabpn1	73	78.365	Lepisosteus_oculatus
ENSEEUG00000012973	-	51	91.391	ENSLAFG00000031227	-	100	91.391	Loxodonta_africana
ENSEEUG00000012973	-	64	93.651	ENSMFAG00000032183	BCL2L2-PABPN1	94	92.814	Macaca_fascicularis
ENSEEUG00000012973	-	99	71.141	ENSMMUG00000048382	-	68	76.961	Macaca_mulatta
ENSEEUG00000012973	-	64	93.651	ENSMMUG00000014747	BCL2L2-PABPN1	100	91.781	Macaca_mulatta
ENSEEUG00000012973	-	97	76.125	ENSMNEG00000045065	BCL2L2-PABPN1	93	91.197	Macaca_nemestrina
ENSEEUG00000012973	-	63	76.882	ENSMNEG00000035750	-	99	85.816	Macaca_nemestrina
ENSEEUG00000012973	-	64	93.651	ENSMLEG00000043862	BCL2L2-PABPN1	94	92.814	Mandrillus_leucophaeus
ENSEEUG00000012973	-	99	66.780	ENSMLEG00000034623	-	99	83.688	Mandrillus_leucophaeus
ENSEEUG00000012973	-	69	78.325	ENSMAMG00000007979	pabpn1	68	79.803	Mastacembelus_armatus
ENSEEUG00000012973	-	69	78.325	ENSMZEG00005011904	pabpn1	68	78.500	Maylandia_zebra
ENSEEUG00000012973	-	72	93.365	ENSMAUG00000007383	Gm20521	94	84.507	Mesocricetus_auratus
ENSEEUG00000012973	-	97	77.509	ENSMICG00000010002	BCL2L2-PABPN1	93	91.549	Microcebus_murinus
ENSEEUG00000012973	-	72	93.839	ENSMOCG00000018557	Gm20521	96	91.772	Microtus_ochrogaster
ENSEEUG00000012973	-	69	78.818	ENSMMOG00000005405	pabpn1	86	80.583	Mola_mola
ENSEEUG00000012973	-	71	90.431	ENSMODG00000004535	-	93	87.943	Monodelphis_domestica
ENSEEUG00000012973	-	69	78.325	ENSMALG00000019612	pabpn1	67	79.803	Monopterus_albus
ENSEEUG00000012973	-	64	93.122	MGP_CAROLIEiJ_G0019276	Gm20521	57	93.122	Mus_caroli
ENSEEUG00000012973	-	72	92.891	MGP_CAROLIEiJ_G0019277	Pabpn1	97	90.566	Mus_caroli
ENSEEUG00000012973	-	72	93.365	ENSMUSG00000022194	Pabpn1	97	90.566	Mus_musculus
ENSEEUG00000012973	-	64	93.651	ENSMUSG00000092232	Gm20521	57	93.651	Mus_musculus
ENSEEUG00000012973	-	64	93.651	MGP_PahariEiJ_G0030294	Gm20521	57	93.651	Mus_pahari
ENSEEUG00000012973	-	72	93.365	MGP_PahariEiJ_G0030295	Pabpn1	100	95.238	Mus_pahari
ENSEEUG00000012973	-	64	93.651	MGP_SPRETEiJ_G0020165	Gm20521	57	93.651	Mus_spretus
ENSEEUG00000012973	-	72	93.365	MGP_SPRETEiJ_G0020166	Pabpn1	97	90.566	Mus_spretus
ENSEEUG00000012973	-	53	93.548	ENSMPUG00000006775	-	92	93.548	Mustela_putorius_furo
ENSEEUG00000012973	-	94	81.690	ENSMLUG00000012452	-	70	87.383	Myotis_lucifugus
ENSEEUG00000012973	-	97	73.793	ENSMLUG00000028677	-	75	88.780	Myotis_lucifugus
ENSEEUG00000012973	-	64	92.593	ENSMLUG00000003800	-	100	92.593	Myotis_lucifugus
ENSEEUG00000012973	-	64	93.651	ENSNGAG00000019529	Gm20521	57	93.651	Nannospalax_galili
ENSEEUG00000012973	-	69	78.325	ENSNBRG00000023955	pabpn1	94	79.167	Neolamprologus_brichardi
ENSEEUG00000012973	-	50	66.216	ENSNLEG00000035292	-	99	65.306	Nomascus_leucogenys
ENSEEUG00000012973	-	72	93.365	ENSNLEG00000015007	-	75	93.396	Nomascus_leucogenys
ENSEEUG00000012973	-	99	72.945	ENSNLEG00000030598	-	79	78.302	Nomascus_leucogenys
ENSEEUG00000012973	-	75	82.432	ENSODEG00000003739	-	96	75.704	Octodon_degus
ENSEEUG00000012973	-	60	80.899	ENSODEG00000011555	-	89	80.240	Octodon_degus
ENSEEUG00000012973	-	72	93.396	ENSODEG00000002083	BCL2L2-PABPN1	93	90.845	Octodon_degus
ENSEEUG00000012973	-	69	78.325	ENSONIG00000008112	pabpn1	68	78.500	Oreochromis_niloticus
ENSEEUG00000012973	-	72	92.453	ENSOCUG00000016174	PABPN1	93	84.155	Oryctolagus_cuniculus
ENSEEUG00000012973	-	69	78.818	ENSORLG00000027900	pabpn1	78	82.105	Oryzias_latipes
ENSEEUG00000012973	-	64	82.353	ENSORLG00020004681	pabpn1	67	80.296	Oryzias_latipes_hni
ENSEEUG00000012973	-	71	76.555	ENSORLG00015000018	pabpn1	86	80.583	Oryzias_latipes_hsok
ENSEEUG00000012973	-	66	81.347	ENSOMEG00000016618	pabpn1	69	80.612	Oryzias_melastigma
ENSEEUG00000012973	-	72	93.365	ENSOGAG00000008710	PABPN1	93	91.197	Otolemur_garnettii
ENSEEUG00000012973	-	64	93.651	ENSOARG00000019336	BCL2L2-PABPN1	52	93.651	Ovis_aries
ENSEEUG00000012973	-	64	93.651	ENSPPAG00000028984	BCL2L2-PABPN1	92	93.548	Pan_paniscus
ENSEEUG00000012973	-	57	76.647	ENSPPAG00000039421	-	93	76.647	Pan_paniscus
ENSEEUG00000012973	-	72	93.365	ENSPPRG00000010567	PABPN1	93	91.197	Panthera_pardus
ENSEEUG00000012973	-	57	92.814	ENSPTIG00000001063	BCL2L2-PABPN1	94	92.814	Panthera_tigris_altaica
ENSEEUG00000012973	-	74	73.973	ENSPTRG00000047273	-	100	69.149	Pan_troglodytes
ENSEEUG00000012973	-	97	76.125	ENSPTRG00000006167	BCL2L2	93	91.197	Pan_troglodytes
ENSEEUG00000012973	-	97	76.125	ENSPANG00000021100	BCL2L2-PABPN1	93	91.197	Papio_anubis
ENSEEUG00000012973	-	99	71.525	ENSPANG00000023326	-	99	85.816	Papio_anubis
ENSEEUG00000012973	-	71	78.947	ENSPKIG00000018052	pabpn1	86	79.612	Paramormyrops_kingsleyae
ENSEEUG00000012973	-	69	78.818	ENSPKIG00000008144	-	67	80.296	Paramormyrops_kingsleyae
ENSEEUG00000012973	-	67	59.091	ENSPKIG00000008340	pabpn1l	92	61.111	Paramormyrops_kingsleyae
ENSEEUG00000012973	-	69	77.833	ENSPMGG00000022027	pabpn1	71	78.000	Periophthalmus_magnuspinnatus
ENSEEUG00000012973	-	72	93.365	ENSPEMG00000008332	Gm20521	96	91.195	Peromyscus_maniculatus_bairdii
ENSEEUG00000012973	-	51	84.459	ENSPMAG00000006212	pabpn1	84	73.529	Petromyzon_marinus
ENSEEUG00000012973	-	72	90.995	ENSPCIG00000027751	-	93	88.028	Phascolarctos_cinereus
ENSEEUG00000012973	-	71	72.381	ENSPFOG00000010351	pabpn1	86	78.261	Poecilia_formosa
ENSEEUG00000012973	-	69	77.451	ENSPLAG00000022696	pabpn1	68	78.922	Poecilia_latipinna
ENSEEUG00000012973	-	71	72.381	ENSPMEG00000020856	pabpn1	86	78.261	Poecilia_mexicana
ENSEEUG00000012973	-	69	75.000	ENSPREG00000011278	pabpn1	86	78.744	Poecilia_reticulata
ENSEEUG00000012973	-	68	93.970	ENSPPYG00000005663	PABPN1	93	93.077	Pongo_abelii
ENSEEUG00000012973	-	71	80.000	ENSPCAG00000005902	PABPN1	93	80.952	Procavia_capensis
ENSEEUG00000012973	-	97	77.509	ENSPCOG00000028047	BCL2L2-PABPN1	93	91.549	Propithecus_coquereli
ENSEEUG00000012973	-	72	89.573	ENSPVAG00000005270	PABPN1	93	76.678	Pteropus_vampyrus
ENSEEUG00000012973	-	71	76.077	ENSPNYG00000013182	pabpn1	86	80.097	Pundamilia_nyererei
ENSEEUG00000012973	-	52	69.079	ENSPNAG00000021666	pabpn1l	94	62.000	Pygocentrus_nattereri
ENSEEUG00000012973	-	69	79.803	ENSPNAG00000023526	pabpn1	86	81.553	Pygocentrus_nattereri
ENSEEUG00000012973	-	72	93.839	ENSRNOG00000042195	Pabpn1	93	84.859	Rattus_norvegicus
ENSEEUG00000012973	-	80	81.116	ENSRBIG00000042811	-	88	80.569	Rhinopithecus_bieti
ENSEEUG00000012973	-	99	71.333	ENSRBIG00000039547	-	75	80.488	Rhinopithecus_bieti
ENSEEUG00000012973	-	60	94.350	ENSRBIG00000040762	BCL2L2-PABPN1	55	94.350	Rhinopithecus_bieti
ENSEEUG00000012973	-	80	77.350	ENSRROG00000036409	-	73	77.350	Rhinopithecus_roxellana
ENSEEUG00000012973	-	99	71.667	ENSRROG00000040409	-	75	80.976	Rhinopithecus_roxellana
ENSEEUG00000012973	-	60	94.350	ENSRROG00000045535	BCL2L2-PABPN1	94	92.814	Rhinopithecus_roxellana
ENSEEUG00000012973	-	64	87.624	ENSSBOG00000026930	BCL2L2-PABPN1	92	93.548	Saimiri_boliviensis_boliviensis
ENSEEUG00000012973	-	77	68.142	ENSSHAG00000007707	-	90	70.755	Sarcophilus_harrisii
ENSEEUG00000012973	-	64	91.005	ENSSHAG00000014841	-	87	91.005	Sarcophilus_harrisii
ENSEEUG00000012973	-	71	75.598	ENSSFOG00015014718	pabpn1	86	80.097	Scleropages_formosus
ENSEEUG00000012973	-	69	60.396	ENSSFOG00015015833	pabpn1l	81	65.746	Scleropages_formosus
ENSEEUG00000012973	-	71	75.598	ENSSFOG00015012565	pabpn1	90	79.612	Scleropages_formosus
ENSEEUG00000012973	-	69	78.325	ENSSMAG00000020157	pabpn1	86	80.097	Scophthalmus_maximus
ENSEEUG00000012973	-	69	78.325	ENSSDUG00000020582	pabpn1	67	79.803	Seriola_dumerili
ENSEEUG00000012973	-	71	76.077	ENSSLDG00000007118	pabpn1	86	80.097	Seriola_lalandi_dorsalis
ENSEEUG00000012973	-	57	83.234	ENSSPUG00000018308	-	94	88.623	Sphenodon_punctatus
ENSEEUG00000012973	-	69	77.833	ENSSPAG00000021658	pabpn1	86	79.612	Stegastes_partitus
ENSEEUG00000012973	-	60	52.273	ENSSSCG00000038472	-	91	51.497	Sus_scrofa
ENSEEUG00000012973	-	76	69.820	ENSSSCG00000034805	-	76	65.517	Sus_scrofa
ENSEEUG00000012973	-	72	93.365	ENSSSCG00000002023	PABPN1	93	91.197	Sus_scrofa
ENSEEUG00000012973	-	69	79.310	ENSTRUG00000023664	pabpn1	86	81.068	Takifugu_rubripes
ENSEEUG00000012973	-	70	79.512	ENSTNIG00000005369	pabpn1	89	79.703	Tetraodon_nigroviridis
ENSEEUG00000012973	-	72	93.365	ENSUAMG00000024460	PABPN1	93	90.493	Ursus_americanus
ENSEEUG00000012973	-	64	93.651	ENSUMAG00000014288	BCL2L2-PABPN1	57	93.651	Ursus_maritimus
ENSEEUG00000012973	-	64	93.651	ENSVVUG00000019912	BCL2L2-PABPN1	76	92.228	Vulpes_vulpes
ENSEEUG00000012973	-	67	86.735	ENSXETG00000014597	pabpn1	71	85.446	Xenopus_tropicalis
ENSEEUG00000012973	-	59	61.582	ENSXCOG00000005158	pabpn1	91	77.273	Xiphophorus_couchianus
ENSEEUG00000012973	-	71	73.333	ENSXMAG00000006196	pabpn1	86	79.227	Xiphophorus_maculatus