EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000013144 (Gene tree)
Gene ID: -
Gene Symbol: POLR1D
Alias: MGC9850|RPA16|RPA9|RPAC2|RPO1-3
Full Name: RNA polymerase I and III subunit D
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 375 bases
Position: chrscaffold_363522:7399-7773
Accession: 20422
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000011957	RNA_pol_L_2	PF13656.6	1.9e-28	1	1
ENSEEUP00000011957	RNA_pol_L	PF01193.24	3.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000013119	POLR1D-201	375	-	ENSEEUP00000011957	124 (aa)	-	UPI0000F61440

Gene Model

Click here to download ENSEEUG00000013144's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000013144's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000013144	POLR1D	100	96.774	ENSG00000186184	POLR1D	100	96.552	Homo_sapiens
ENSEEUG00000013144	POLR1D	90	66.667	ENSAPOG00000021882	polr1d	98	66.667	Acanthochromis_polyacanthus
ENSEEUG00000013144	POLR1D	100	98.387	ENSAMEG00000019095	POLR1D	99	98.387	Ailuropoda_melanoleuca
ENSEEUG00000013144	POLR1D	85	71.963	ENSACIG00000013328	polr1d	93	71.963	Amphilophus_citrinellus
ENSEEUG00000013144	POLR1D	90	66.964	ENSAOCG00000018500	polr1d	98	66.964	Amphiprion_ocellaris
ENSEEUG00000013144	POLR1D	85	69.524	ENSAPEG00000009489	polr1d	92	69.524	Amphiprion_percula
ENSEEUG00000013144	POLR1D	85	68.868	ENSATEG00000019322	polr1d	93	68.868	Anabas_testudineus
ENSEEUG00000013144	POLR1D	90	66.667	ENSACAG00000015753	POLR1D	96	66.667	Anolis_carolinensis
ENSEEUG00000013144	POLR1D	100	97.581	ENSANAG00000024486	POLR1D	93	97.581	Aotus_nancymaae
ENSEEUG00000013144	POLR1D	85	72.642	ENSACLG00000023805	polr1d	95	71.028	Astatotilapia_calliptera
ENSEEUG00000013144	POLR1D	85	69.811	ENSAMXG00000036118	polr1d	92	69.811	Astyanax_mexicanus
ENSEEUG00000013144	POLR1D	100	95.968	ENSBTAG00000033252	-	93	95.968	Bos_taurus
ENSEEUG00000013144	POLR1D	100	95.968	ENSBTAG00000008642	POLR1D	93	95.968	Bos_taurus
ENSEEUG00000013144	POLR1D	66	37.805	WBGene00010230	rpac-19	57	37.805	Caenorhabditis_elegans
ENSEEUG00000013144	POLR1D	100	96.774	ENSCJAG00000044669	POLR1D	93	96.774	Callithrix_jacchus
ENSEEUG00000013144	POLR1D	100	98.387	ENSCAFG00000006755	POLR1D	93	98.387	Canis_familiaris
ENSEEUG00000013144	POLR1D	100	96.774	ENSCHIG00000021910	POLR1D	93	96.774	Capra_hircus
ENSEEUG00000013144	POLR1D	100	92.742	ENSTSYG00000026817	-	93	92.742	Carlito_syrichta
ENSEEUG00000013144	POLR1D	100	80.952	ENSTSYG00000034852	-	98	81.513	Carlito_syrichta
ENSEEUG00000013144	POLR1D	56	81.159	ENSCAPG00000006058	-	70	81.159	Cavia_aperea
ENSEEUG00000013144	POLR1D	56	79.710	ENSCPOG00000030450	-	70	79.710	Cavia_porcellus
ENSEEUG00000013144	POLR1D	100	77.419	ENSCCAG00000020191	-	92	77.419	Cebus_capucinus
ENSEEUG00000013144	POLR1D	100	95.968	ENSCCAG00000021349	-	93	95.968	Cebus_capucinus
ENSEEUG00000013144	POLR1D	100	83.871	ENSCATG00000022900	-	93	83.871	Cercocebus_atys
ENSEEUG00000013144	POLR1D	100	95.161	ENSCATG00000030710	-	93	95.161	Cercocebus_atys
ENSEEUG00000013144	POLR1D	100	95.161	ENSCLAG00000017623	POLR1D	100	95.161	Chinchilla_lanigera
ENSEEUG00000013144	POLR1D	78	78.351	ENSCPBG00000004719	POLR1D	96	78.351	Chrysemys_picta_bellii
ENSEEUG00000013144	POLR1D	100	91.935	ENSCANG00000037694	-	93	91.935	Colobus_angolensis_palliatus
ENSEEUG00000013144	POLR1D	100	95.161	ENSCANG00000028632	-	93	95.161	Colobus_angolensis_palliatus
ENSEEUG00000013144	POLR1D	100	94.355	ENSCGRG00001021251	Polr1d	93	94.355	Cricetulus_griseus_chok1gshd
ENSEEUG00000013144	POLR1D	100	94.355	ENSCGRG00000011639	Polr1d	93	94.355	Cricetulus_griseus_crigri
ENSEEUG00000013144	POLR1D	84	71.154	ENSCSEG00000018268	polr1d	91	70.755	Cynoglossus_semilaevis
ENSEEUG00000013144	POLR1D	85	72.381	ENSCVAG00000018527	polr1d	92	72.381	Cyprinodon_variegatus
ENSEEUG00000013144	POLR1D	89	67.273	ENSDARG00000037570	polr1d	98	67.273	Danio_rerio
ENSEEUG00000013144	POLR1D	100	93.548	ENSDNOG00000043676	-	93	93.548	Dasypus_novemcinctus
ENSEEUG00000013144	POLR1D	100	91.935	ENSDNOG00000046247	-	93	91.935	Dasypus_novemcinctus
ENSEEUG00000013144	POLR1D	100	93.548	ENSDORG00000029155	Polr1d	93	93.548	Dipodomys_ordii
ENSEEUG00000013144	POLR1D	65	45.679	FBgn0086447	l(2)37Cg	76	45.679	Drosophila_melanogaster
ENSEEUG00000013144	POLR1D	100	88.710	ENSETEG00000012797	POLR1D	100	88.710	Echinops_telfairi
ENSEEUG00000013144	POLR1D	70	71.264	ENSEBUG00000011748	polr1d	61	71.264	Eptatretus_burgeri
ENSEEUG00000013144	POLR1D	96	96.639	ENSEASG00005022487	POLR1D	92	96.639	Equus_asinus_asinus
ENSEEUG00000013144	POLR1D	85	69.811	ENSELUG00000005105	rpac2	93	69.811	Esox_lucius
ENSEEUG00000013144	POLR1D	100	96.774	ENSFCAG00000030162	POLR1D	93	96.774	Felis_catus
ENSEEUG00000013144	POLR1D	77	77.895	ENSFALG00000011463	POLR1D	94	77.895	Ficedula_albicollis
ENSEEUG00000013144	POLR1D	100	93.548	ENSFDAG00000004463	POLR1D	93	93.548	Fukomys_damarensis
ENSEEUG00000013144	POLR1D	86	75.000	ENSFHEG00000015410	polr1d	94	75.000	Fundulus_heteroclitus
ENSEEUG00000013144	POLR1D	51	73.016	ENSGALG00000007470	POLR1D	62	73.016	Gallus_gallus
ENSEEUG00000013144	POLR1D	89	69.643	ENSGAFG00000001693	polr1d	92	73.333	Gambusia_affinis
ENSEEUG00000013144	POLR1D	94	67.797	ENSGACG00000018585	polr1d	100	67.797	Gasterosteus_aculeatus
ENSEEUG00000013144	POLR1D	85	80.000	ENSGAGG00000008503	POLR1D	92	80.000	Gopherus_agassizii
ENSEEUG00000013144	POLR1D	100	96.774	ENSGGOG00000004235	POLR1D	93	96.774	Gorilla_gorilla
ENSEEUG00000013144	POLR1D	85	72.642	ENSHBUG00000002111	polr1d	93	72.642	Haplochromis_burtoni
ENSEEUG00000013144	POLR1D	100	93.548	ENSHGLG00000003202	POLR1D	93	93.548	Heterocephalus_glaber_female
ENSEEUG00000013144	POLR1D	100	93.548	ENSHGLG00100009393	POLR1D	93	93.548	Heterocephalus_glaber_male
ENSEEUG00000013144	POLR1D	84	72.115	ENSHCOG00000003258	polr1d	91	72.115	Hippocampus_comes
ENSEEUG00000013144	POLR1D	88	70.642	ENSIPUG00000014810	polr1d	95	70.642	Ictalurus_punctatus
ENSEEUG00000013144	POLR1D	100	97.581	ENSSTOG00000013877	POLR1D	93	97.581	Ictidomys_tridecemlineatus
ENSEEUG00000013144	POLR1D	100	92.742	ENSJJAG00000022671	-	100	92.500	Jaculus_jaculus
ENSEEUG00000013144	POLR1D	100	75.000	ENSJJAG00000021667	-	73	75.000	Jaculus_jaculus
ENSEEUG00000013144	POLR1D	85	68.571	ENSKMAG00000015256	polr1d	92	68.571	Kryptolebias_marmoratus
ENSEEUG00000013144	POLR1D	85	73.333	ENSLBEG00000015919	polr1d	92	73.333	Labrus_bergylta
ENSEEUG00000013144	POLR1D	94	66.379	ENSLACG00000006810	POLR1D	96	66.379	Latimeria_chalumnae
ENSEEUG00000013144	POLR1D	58	77.027	ENSLOCG00000014976	polr1d	100	77.027	Lepisosteus_oculatus
ENSEEUG00000013144	POLR1D	100	87.903	ENSLAFG00000032290	POLR1D	93	87.903	Loxodonta_africana
ENSEEUG00000013144	POLR1D	100	95.968	ENSMFAG00000045264	POLR1D	96	95.968	Macaca_fascicularis
ENSEEUG00000013144	POLR1D	94	95.690	ENSMMUG00000020386	POLR1D	100	95.690	Macaca_mulatta
ENSEEUG00000013144	POLR1D	100	75.000	ENSMMUG00000041570	-	92	75.000	Macaca_mulatta
ENSEEUG00000013144	POLR1D	100	79.032	ENSMNEG00000038120	-	93	79.032	Macaca_nemestrina
ENSEEUG00000013144	POLR1D	100	95.968	ENSMNEG00000008630	-	93	95.968	Macaca_nemestrina
ENSEEUG00000013144	POLR1D	100	84.677	ENSMLEG00000032251	-	93	84.677	Mandrillus_leucophaeus
ENSEEUG00000013144	POLR1D	100	95.968	ENSMLEG00000041048	-	93	95.968	Mandrillus_leucophaeus
ENSEEUG00000013144	POLR1D	81	71.287	ENSMAMG00000014834	polr1d	94	71.287	Mastacembelus_armatus
ENSEEUG00000013144	POLR1D	86	71.028	ENSMZEG00005006638	polr1d	95	71.028	Maylandia_zebra
ENSEEUG00000013144	POLR1D	86	69.725	ENSMGAG00000005322	POLR1D	100	69.725	Meleagris_gallopavo
ENSEEUG00000013144	POLR1D	100	94.355	ENSMAUG00000001946	Polr1d	93	94.355	Mesocricetus_auratus
ENSEEUG00000013144	POLR1D	100	78.226	ENSMICG00000007349	-	94	78.226	Microcebus_murinus
ENSEEUG00000013144	POLR1D	100	95.161	ENSMICG00000016883	-	93	95.161	Microcebus_murinus
ENSEEUG00000013144	POLR1D	99	93.496	ENSMOCG00000021288	Polr1d	92	93.496	Microtus_ochrogaster
ENSEEUG00000013144	POLR1D	85	69.811	ENSMMOG00000009605	polr1d	93	69.811	Mola_mola
ENSEEUG00000013144	POLR1D	85	84.762	ENSMODG00000023881	POLR1D	92	84.762	Monodelphis_domestica
ENSEEUG00000013144	POLR1D	84	70.192	ENSMALG00000010652	polr1d	91	70.192	Monopterus_albus
ENSEEUG00000013144	POLR1D	100	89.516	MGP_CAROLIEiJ_G0028034	Polr1d	93	89.516	Mus_caroli
ENSEEUG00000013144	POLR1D	100	89.516	ENSMUSG00000029642	Polr1d	93	89.516	Mus_musculus
ENSEEUG00000013144	POLR1D	100	88.710	MGP_PahariEiJ_G0024600	Polr1d	93	88.710	Mus_pahari
ENSEEUG00000013144	POLR1D	100	90.323	MGP_SPRETEiJ_G0029032	Polr1d	93	90.323	Mus_spretus
ENSEEUG00000013144	POLR1D	100	87.903	ENSMLUG00000004118	-	93	87.903	Myotis_lucifugus
ENSEEUG00000013144	POLR1D	100	96.774	ENSMLUG00000027169	-	93	96.774	Myotis_lucifugus
ENSEEUG00000013144	POLR1D	94	95.690	ENSNGAG00000006014	Polr1d	100	95.690	Nannospalax_galili
ENSEEUG00000013144	POLR1D	85	72.642	ENSNBRG00000020327	polr1d	93	72.642	Neolamprologus_brichardi
ENSEEUG00000013144	POLR1D	100	96.774	ENSNLEG00000000358	POLR1D	93	96.774	Nomascus_leucogenys
ENSEEUG00000013144	POLR1D	100	79.839	ENSODEG00000014801	-	92	79.839	Octodon_degus
ENSEEUG00000013144	POLR1D	100	95.161	ENSODEG00000005294	-	93	95.161	Octodon_degus
ENSEEUG00000013144	POLR1D	85	82.857	ENSOANG00000008708	-	97	82.857	Ornithorhynchus_anatinus
ENSEEUG00000013144	POLR1D	100	95.968	ENSOCUG00000015706	POLR1D	76	95.968	Oryctolagus_cuniculus
ENSEEUG00000013144	POLR1D	85	69.811	ENSORLG00000010257	polr1d	93	69.811	Oryzias_latipes
ENSEEUG00000013144	POLR1D	90	67.568	ENSORLG00020000533	polr1d	75	67.568	Oryzias_latipes_hni
ENSEEUG00000013144	POLR1D	91	68.142	ENSORLG00015013267	polr1d	75	68.142	Oryzias_latipes_hsok
ENSEEUG00000013144	POLR1D	93	67.826	ENSOMEG00000014912	polr1d	77	67.826	Oryzias_melastigma
ENSEEUG00000013144	POLR1D	100	95.161	ENSOGAG00000014601	POLR1D	93	95.161	Otolemur_garnettii
ENSEEUG00000013144	POLR1D	100	96.774	ENSOARG00000017005	POLR1D	95	96.774	Ovis_aries
ENSEEUG00000013144	POLR1D	100	95.968	ENSPPAG00000028138	POLR1D	93	95.968	Pan_paniscus
ENSEEUG00000013144	POLR1D	99	96.748	ENSPPRG00000003381	POLR1D	92	96.748	Panthera_pardus
ENSEEUG00000013144	POLR1D	100	96.774	ENSPTIG00000018137	POLR1D	93	96.774	Panthera_tigris_altaica
ENSEEUG00000013144	POLR1D	100	96.774	ENSPTRG00000005734	POLR1D	93	96.774	Pan_troglodytes
ENSEEUG00000013144	POLR1D	100	95.968	ENSPANG00000020259	-	93	95.968	Papio_anubis
ENSEEUG00000013144	POLR1D	100	83.871	ENSPANG00000035051	-	93	83.871	Papio_anubis
ENSEEUG00000013144	POLR1D	94	61.207	ENSPKIG00000021891	polr1d	94	50.000	Paramormyrops_kingsleyae
ENSEEUG00000013144	POLR1D	94	72.650	ENSPSIG00000011822	POLR1D	91	72.650	Pelodiscus_sinensis
ENSEEUG00000013144	POLR1D	94	58.974	ENSPMGG00000012998	POLR1D	86	58.974	Periophthalmus_magnuspinnatus
ENSEEUG00000013144	POLR1D	90	66.964	ENSPMGG00000010359	polr1d	97	66.964	Periophthalmus_magnuspinnatus
ENSEEUG00000013144	POLR1D	100	92.742	ENSPEMG00000006336	-	95	92.742	Peromyscus_maniculatus_bairdii
ENSEEUG00000013144	POLR1D	88	59.633	ENSPMAG00000004228	polr1d	92	59.633	Petromyzon_marinus
ENSEEUG00000013144	POLR1D	85	84.762	ENSPCIG00000001673	POLR1D	92	84.762	Phascolarctos_cinereus
ENSEEUG00000013144	POLR1D	85	73.333	ENSPFOG00000023343	polr1d	92	75.000	Poecilia_formosa
ENSEEUG00000013144	POLR1D	85	73.333	ENSPLAG00000009675	polr1d	92	73.333	Poecilia_latipinna
ENSEEUG00000013144	POLR1D	85	73.333	ENSPMEG00000004628	polr1d	92	73.333	Poecilia_mexicana
ENSEEUG00000013144	POLR1D	85	73.333	ENSPREG00000022032	polr1d	92	73.333	Poecilia_reticulata
ENSEEUG00000013144	POLR1D	100	95.161	ENSPCOG00000028175	POLR1D	93	95.161	Propithecus_coquereli
ENSEEUG00000013144	POLR1D	85	72.642	ENSPNYG00000000107	polr1d	93	72.642	Pundamilia_nyererei
ENSEEUG00000013144	POLR1D	81	69.307	ENSPNAG00000001512	polr1d	87	68.269	Pygocentrus_nattereri
ENSEEUG00000013144	POLR1D	100	95.968	ENSRBIG00000036378	-	93	95.968	Rhinopithecus_bieti
ENSEEUG00000013144	POLR1D	100	92.742	ENSRBIG00000000336	-	93	92.742	Rhinopithecus_bieti
ENSEEUG00000013144	POLR1D	100	95.968	ENSRROG00000042232	-	93	95.968	Rhinopithecus_roxellana
ENSEEUG00000013144	POLR1D	100	92.742	ENSRROG00000026751	-	93	92.742	Rhinopithecus_roxellana
ENSEEUG00000013144	POLR1D	73	53.846	YNL113W	RPC19	77	47.706	Saccharomyces_cerevisiae
ENSEEUG00000013144	POLR1D	85	93.333	ENSSBOG00000030146	-	77	93.333	Saimiri_boliviensis_boliviensis
ENSEEUG00000013144	POLR1D	100	97.581	ENSSBOG00000028482	-	93	97.581	Saimiri_boliviensis_boliviensis
ENSEEUG00000013144	POLR1D	92	77.193	ENSSHAG00000001190	POLR1D	88	77.193	Sarcophilus_harrisii
ENSEEUG00000013144	POLR1D	90	72.973	ENSSFOG00015011375	polr1d	97	72.973	Scleropages_formosus
ENSEEUG00000013144	POLR1D	85	69.811	ENSSMAG00000011861	polr1d	93	69.811	Scophthalmus_maximus
ENSEEUG00000013144	POLR1D	85	68.868	ENSSDUG00000011930	polr1d	93	68.868	Seriola_dumerili
ENSEEUG00000013144	POLR1D	93	63.478	ENSSLDG00000023871	polr1d	97	63.478	Seriola_lalandi_dorsalis
ENSEEUG00000013144	POLR1D	100	96.774	ENSSARG00000007840	POLR1D	93	96.774	Sorex_araneus
ENSEEUG00000013144	POLR1D	85	76.190	ENSSPUG00000005786	POLR1D	95	72.973	Sphenodon_punctatus
ENSEEUG00000013144	POLR1D	85	72.381	ENSSPAG00000011764	polr1d	92	72.381	Stegastes_partitus
ENSEEUG00000013144	POLR1D	100	93.548	ENSSSCG00000009310	POLR1D	93	93.548	Sus_scrofa
ENSEEUG00000013144	POLR1D	77	77.895	ENSTGUG00000005450	POLR1D	99	77.895	Taeniopygia_guttata
ENSEEUG00000013144	POLR1D	84	65.385	ENSTRUG00000019741	polr1d	91	65.385	Takifugu_rubripes
ENSEEUG00000013144	POLR1D	100	95.161	ENSTBEG00000007006	POLR1D	100	95.161	Tupaia_belangeri
ENSEEUG00000013144	POLR1D	100	98.387	ENSUAMG00000011413	POLR1D	93	98.387	Ursus_americanus
ENSEEUG00000013144	POLR1D	100	98.387	ENSUMAG00000016968	POLR1D	97	98.387	Ursus_maritimus
ENSEEUG00000013144	POLR1D	100	98.387	ENSVVUG00000009216	POLR1D	93	98.387	Vulpes_vulpes
ENSEEUG00000013144	POLR1D	79	75.510	ENSXCOG00000011731	polr1d	75	75.510	Xiphophorus_couchianus
ENSEEUG00000013144	POLR1D	79	75.510	ENSXMAG00000017538	polr1d	75	75.510	Xiphophorus_maculatus