EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000013176 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA5
Alias: ISWI|hISWI|hSNF2H
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 66770 bases
Position: chrGeneScaffold_5335:891-67660
Accession: 11101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000012043	ResIII	PF04851.15	4.7e-11	1	1
ENSEEUP00000012043	DEAD	PF00270.29	2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000013213	SMARCA5-201	2982	-	ENSEEUP00000012043	993 (aa)	-	UPI0000F62CCE

Gene Model

Click here to download ENSEEUG00000013176's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000013176's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000013176	SMARCA5	80	86.711	ENSEEUG00000014927	SMARCA1	80	86.711

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000013176	SMARCA5	100	94.965	ENSG00000153147	SMARCA5	94	94.965	Homo_sapiens
ENSEEUG00000013176	SMARCA5	100	95.267	ENSAMEG00000009585	SMARCA5	94	95.267	Ailuropoda_melanoleuca
ENSEEUG00000013176	SMARCA5	97	92.402	ENSAPLG00000009206	SMARCA5	100	92.402	Anas_platyrhynchos
ENSEEUG00000013176	SMARCA5	100	92.455	ENSACAG00000003038	SMARCA5	96	92.455	Anolis_carolinensis
ENSEEUG00000013176	SMARCA5	100	95.065	ENSANAG00000019345	SMARCA5	99	95.065	Aotus_nancymaae
ENSEEUG00000013176	SMARCA5	100	95.166	ENSBTAG00000003399	SMARCA5	94	95.166	Bos_taurus
ENSEEUG00000013176	SMARCA5	100	95.166	ENSCJAG00000002735	SMARCA5	94	95.166	Callithrix_jacchus
ENSEEUG00000013176	SMARCA5	100	95.267	ENSCAFG00000007525	SMARCA5	94	95.267	Canis_familiaris
ENSEEUG00000013176	SMARCA5	98	95.170	ENSCAFG00020025641	SMARCA5	93	95.170	Canis_lupus_dingo
ENSEEUG00000013176	SMARCA5	100	93.454	ENSCHIG00000016375	-	95	93.578	Capra_hircus
ENSEEUG00000013176	SMARCA5	100	95.166	ENSCHIG00000013730	-	94	95.166	Capra_hircus
ENSEEUG00000013176	SMARCA5	100	95.065	ENSTSYG00000009954	SMARCA5	99	95.065	Carlito_syrichta
ENSEEUG00000013176	SMARCA5	97	94.628	ENSCAPG00000013747	SMARCA5	95	94.628	Cavia_aperea
ENSEEUG00000013176	SMARCA5	100	94.965	ENSCPOG00000002259	SMARCA5	94	94.965	Cavia_porcellus
ENSEEUG00000013176	SMARCA5	100	95.166	ENSCCAG00000027215	SMARCA5	99	95.166	Cebus_capucinus
ENSEEUG00000013176	SMARCA5	100	95.065	ENSCATG00000044917	SMARCA5	94	95.065	Cercocebus_atys
ENSEEUG00000013176	SMARCA5	100	95.166	ENSCLAG00000006153	SMARCA5	100	95.166	Chinchilla_lanigera
ENSEEUG00000013176	SMARCA5	98	95.046	ENSCSAG00000003448	SMARCA5	100	95.046	Chlorocebus_sabaeus
ENSEEUG00000013176	SMARCA5	91	96.000	ENSCHOG00000011724	SMARCA5	86	96.000	Choloepus_hoffmanni
ENSEEUG00000013176	SMARCA5	100	93.964	ENSCPBG00000027535	SMARCA5	96	93.964	Chrysemys_picta_bellii
ENSEEUG00000013176	SMARCA5	100	95.065	ENSCANG00000041629	SMARCA5	94	95.065	Colobus_angolensis_palliatus
ENSEEUG00000013176	SMARCA5	100	95.166	ENSCGRG00001012719	Smarca5	94	95.166	Cricetulus_griseus_chok1gshd
ENSEEUG00000013176	SMARCA5	100	95.166	ENSCGRG00000001417	Smarca5	99	95.065	Cricetulus_griseus_crigri
ENSEEUG00000013176	SMARCA5	100	92.346	ENSDNOG00000009158	SMARCA5	94	92.346	Dasypus_novemcinctus
ENSEEUG00000013176	SMARCA5	95	86.287	ENSDORG00000003466	Smarca5	97	86.287	Dipodomys_ordii
ENSEEUG00000013176	SMARCA5	97	82.541	ENSEBUG00000014773	SMARCA5	96	82.541	Eptatretus_burgeri
ENSEEUG00000013176	SMARCA5	100	95.267	ENSEASG00005001866	SMARCA5	98	94.424	Equus_asinus_asinus
ENSEEUG00000013176	SMARCA5	100	95.267	ENSECAG00000002676	SMARCA5	94	95.267	Equus_caballus
ENSEEUG00000013176	SMARCA5	97	85.876	ENSELUG00000014653	SMARCA5	99	85.876	Esox_lucius
ENSEEUG00000013176	SMARCA5	100	95.267	ENSFCAG00000004544	SMARCA5	94	95.267	Felis_catus
ENSEEUG00000013176	SMARCA5	98	92.887	ENSFALG00000004987	SMARCA5	100	92.887	Ficedula_albicollis
ENSEEUG00000013176	SMARCA5	100	95.166	ENSFDAG00000021016	SMARCA5	100	95.166	Fukomys_damarensis
ENSEEUG00000013176	SMARCA5	98	85.963	ENSGMOG00000007519	SMARCA5	94	85.963	Gadus_morhua
ENSEEUG00000013176	SMARCA5	100	93.159	ENSGALG00000009913	SMARCA5	96	93.159	Gallus_gallus
ENSEEUG00000013176	SMARCA5	99	86.176	ENSGACG00000017238	SMARCA5	95	87.193	Gasterosteus_aculeatus
ENSEEUG00000013176	SMARCA5	100	94.064	ENSGAGG00000019882	SMARCA5	96	94.064	Gopherus_agassizii
ENSEEUG00000013176	SMARCA5	100	94.965	ENSGGOG00000012595	SMARCA5	99	94.965	Gorilla_gorilla
ENSEEUG00000013176	SMARCA5	100	86.405	ENSHGLG00000000317	-	95	86.405	Heterocephalus_glaber_female
ENSEEUG00000013176	SMARCA5	100	95.065	ENSHGLG00000000816	-	94	95.065	Heterocephalus_glaber_female
ENSEEUG00000013176	SMARCA5	100	95.065	ENSHGLG00100018421	-	100	95.065	Heterocephalus_glaber_male
ENSEEUG00000013176	SMARCA5	100	95.166	ENSSTOG00000010683	SMARCA5	94	95.166	Ictidomys_tridecemlineatus
ENSEEUG00000013176	SMARCA5	100	94.864	ENSJJAG00000014965	Smarca5	95	94.864	Jaculus_jaculus
ENSEEUG00000013176	SMARCA5	99	91.165	ENSLACG00000007091	SMARCA5	97	91.322	Latimeria_chalumnae
ENSEEUG00000013176	SMARCA5	99	88.629	ENSLOCG00000008966	SMARCA5	96	88.629	Lepisosteus_oculatus
ENSEEUG00000013176	SMARCA5	100	95.267	ENSLAFG00000007795	SMARCA5	94	95.267	Loxodonta_africana
ENSEEUG00000013176	SMARCA5	100	95.065	ENSMFAG00000043649	SMARCA5	94	95.065	Macaca_fascicularis
ENSEEUG00000013176	SMARCA5	100	95.065	ENSMMUG00000000829	SMARCA5	97	94.937	Macaca_mulatta
ENSEEUG00000013176	SMARCA5	100	95.065	ENSMNEG00000031916	SMARCA5	94	95.065	Macaca_nemestrina
ENSEEUG00000013176	SMARCA5	100	95.065	ENSMLEG00000042393	SMARCA5	94	95.065	Mandrillus_leucophaeus
ENSEEUG00000013176	SMARCA5	100	93.159	ENSMGAG00000003517	SMARCA5	97	96.602	Meleagris_gallopavo
ENSEEUG00000013176	SMARCA5	100	95.166	ENSMAUG00000015902	Smarca5	98	95.166	Mesocricetus_auratus
ENSEEUG00000013176	SMARCA5	100	95.065	ENSMICG00000003971	SMARCA5	99	93.493	Microcebus_murinus
ENSEEUG00000013176	SMARCA5	100	94.864	ENSMOCG00000016986	-	94	94.864	Microtus_ochrogaster
ENSEEUG00000013176	SMARCA5	100	94.663	ENSMODG00000000391	SMARCA5	95	94.663	Monodelphis_domestica
ENSEEUG00000013176	SMARCA5	100	95.065	ENSMUSG00000031715	Smarca5	94	95.065	Mus_musculus
ENSEEUG00000013176	SMARCA5	100	95.267	MGP_PahariEiJ_G0022862	Smarca5	94	95.267	Mus_pahari
ENSEEUG00000013176	SMARCA5	100	95.368	ENSMLUG00000000468	SMARCA5	94	95.368	Myotis_lucifugus
ENSEEUG00000013176	SMARCA5	100	95.267	ENSNGAG00000000441	Smarca5	94	95.267	Nannospalax_galili
ENSEEUG00000013176	SMARCA5	100	95.065	ENSNLEG00000005383	SMARCA5	94	95.065	Nomascus_leucogenys
ENSEEUG00000013176	SMARCA5	97	86.777	ENSMEUG00000001267	SMARCA5	100	86.777	Notamacropus_eugenii
ENSEEUG00000013176	SMARCA5	90	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSEEUG00000013176	SMARCA5	98	94.737	ENSOANG00000013921	SMARCA5	100	94.737	Ornithorhynchus_anatinus
ENSEEUG00000013176	SMARCA5	98	95.253	ENSOCUG00000013042	SMARCA5	100	95.253	Oryctolagus_cuniculus
ENSEEUG00000013176	SMARCA5	100	95.065	ENSOGAG00000009702	SMARCA5	94	95.065	Otolemur_garnettii
ENSEEUG00000013176	SMARCA5	99	94.960	ENSOARG00000010589	SMARCA5	94	94.960	Ovis_aries
ENSEEUG00000013176	SMARCA5	100	94.864	ENSPPAG00000028523	SMARCA5	99	94.864	Pan_paniscus
ENSEEUG00000013176	SMARCA5	94	99.695	ENSPPRG00000004925	SMARCA5	93	99.695	Panthera_pardus
ENSEEUG00000013176	SMARCA5	100	95.267	ENSPTIG00000020959	SMARCA5	95	95.267	Panthera_tigris_altaica
ENSEEUG00000013176	SMARCA5	100	94.965	ENSPTRG00000016472	SMARCA5	99	94.965	Pan_troglodytes
ENSEEUG00000013176	SMARCA5	100	95.065	ENSPANG00000001175	SMARCA5	94	95.065	Papio_anubis
ENSEEUG00000013176	SMARCA5	98	87.295	ENSPKIG00000015699	SMARCA5	98	85.697	Paramormyrops_kingsleyae
ENSEEUG00000013176	SMARCA5	98	87.732	ENSPKIG00000015885	SMARCA5	100	87.732	Paramormyrops_kingsleyae
ENSEEUG00000013176	SMARCA5	100	91.650	ENSPSIG00000004177	SMARCA5	99	91.650	Pelodiscus_sinensis
ENSEEUG00000013176	SMARCA5	97	86.200	ENSPMGG00000012316	SMARCA5	100	86.200	Periophthalmus_magnuspinnatus
ENSEEUG00000013176	SMARCA5	100	95.166	ENSPEMG00000008060	Smarca5	98	95.166	Peromyscus_maniculatus_bairdii
ENSEEUG00000013176	SMARCA5	82	86.438	ENSPMAG00000006011	SMARCA5	80	86.438	Petromyzon_marinus
ENSEEUG00000013176	SMARCA5	61	87.070	ENSPMAG00000008026	SMARCA5	95	87.070	Petromyzon_marinus
ENSEEUG00000013176	SMARCA5	100	94.663	ENSPCIG00000003926	SMARCA5	95	94.663	Phascolarctos_cinereus
ENSEEUG00000013176	SMARCA5	100	95.065	ENSPPYG00000015091	SMARCA5	94	95.065	Pongo_abelii
ENSEEUG00000013176	SMARCA5	84	95.638	ENSPCAG00000014230	SMARCA5	83	95.638	Procavia_capensis
ENSEEUG00000013176	SMARCA5	100	95.065	ENSPCOG00000026744	SMARCA5	99	94.467	Propithecus_coquereli
ENSEEUG00000013176	SMARCA5	100	95.166	ENSPVAG00000006482	SMARCA5	95	95.166	Pteropus_vampyrus
ENSEEUG00000013176	SMARCA5	99	86.276	ENSPNAG00000027824	SMARCA5	97	86.411	Pygocentrus_nattereri
ENSEEUG00000013176	SMARCA5	100	95.166	ENSRNOG00000018149	Smarca5	99	95.166	Rattus_norvegicus
ENSEEUG00000013176	SMARCA5	100	95.065	ENSRBIG00000044644	SMARCA5	94	95.065	Rhinopithecus_bieti
ENSEEUG00000013176	SMARCA5	100	95.065	ENSRROG00000029591	SMARCA5	99	95.065	Rhinopithecus_roxellana
ENSEEUG00000013176	SMARCA5	100	95.166	ENSSBOG00000036257	SMARCA5	94	95.166	Saimiri_boliviensis_boliviensis
ENSEEUG00000013176	SMARCA5	100	94.663	ENSSHAG00000008464	SMARCA5	100	94.663	Sarcophilus_harrisii
ENSEEUG00000013176	SMARCA5	99	87.437	ENSSFOG00015013252	SMARCA5	96	87.437	Scleropages_formosus
ENSEEUG00000013176	SMARCA5	99	92.222	ENSSPUG00000007604	SMARCA5	97	97.704	Sphenodon_punctatus
ENSEEUG00000013176	SMARCA5	100	95.267	ENSSSCG00000009047	SMARCA5	94	95.267	Sus_scrofa
ENSEEUG00000013176	SMARCA5	100	92.455	ENSTGUG00000002408	SMARCA5	99	92.455	Taeniopygia_guttata
ENSEEUG00000013176	SMARCA5	98	95.170	ENSUAMG00000023495	SMARCA5	93	95.170	Ursus_americanus
ENSEEUG00000013176	SMARCA5	100	95.267	ENSUMAG00000015324	SMARCA5	96	95.267	Ursus_maritimus
ENSEEUG00000013176	SMARCA5	100	94.965	ENSVPAG00000008982	SMARCA5	94	94.965	Vicugna_pacos
ENSEEUG00000013176	SMARCA5	100	95.267	ENSVVUG00000017473	SMARCA5	94	95.267	Vulpes_vulpes
ENSEEUG00000013176	SMARCA5	94	89.670	ENSXETG00000017566	smarca5	94	89.670	Xenopus_tropicalis