EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000013407 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 2967 bases
Position: chrGeneScaffold_8968:4241-7207
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000012210	SMN	PF06003.12	6.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000013392	-	597	-	ENSEEUP00000012210	198 (aa)	-	UPI0000F610F4

Gene Model

Click here to download ENSEEUG00000013407's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000013407's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000013407	-	100	69.697	ENSG00000119953	SMNDC1	83	69.697	Homo_sapiens
ENSEEUG00000013407	-	100	54.040	ENSAPOG00000021772	smndc1	83	54.040	Acanthochromis_polyacanthus
ENSEEUG00000013407	-	100	70.202	ENSAMEG00000005251	SMNDC1	83	70.202	Ailuropoda_melanoleuca
ENSEEUG00000013407	-	100	56.281	ENSACIG00000004819	smndc1	83	56.281	Amphilophus_citrinellus
ENSEEUG00000013407	-	100	54.040	ENSAOCG00000017869	smndc1	83	54.040	Amphiprion_ocellaris
ENSEEUG00000013407	-	100	54.040	ENSAPEG00000007752	smndc1	83	54.040	Amphiprion_percula
ENSEEUG00000013407	-	100	54.545	ENSATEG00000006830	smndc1	83	54.545	Anabas_testudineus
ENSEEUG00000013407	-	100	68.182	ENSAPLG00000004322	SMNDC1	100	68.182	Anas_platyrhynchos
ENSEEUG00000013407	-	100	66.667	ENSACAG00000005983	SMNDC1	83	66.667	Anolis_carolinensis
ENSEEUG00000013407	-	100	70.202	ENSANAG00000032875	SMNDC1	83	70.202	Aotus_nancymaae
ENSEEUG00000013407	-	100	55.556	ENSACLG00000016360	smndc1	83	55.556	Astatotilapia_calliptera
ENSEEUG00000013407	-	72	86.458	ENSAMXG00000020310	smndc1	60	86.458	Astyanax_mexicanus
ENSEEUG00000013407	-	100	69.697	ENSBTAG00000000551	SMNDC1	83	69.697	Bos_taurus
ENSEEUG00000013407	-	100	70.202	ENSCJAG00000018624	SMNDC1	83	70.202	Callithrix_jacchus
ENSEEUG00000013407	-	100	70.202	ENSCAFG00000010720	SMNDC1	83	70.202	Canis_familiaris
ENSEEUG00000013407	-	100	70.202	ENSCAFG00020011913	SMNDC1	83	70.202	Canis_lupus_dingo
ENSEEUG00000013407	-	100	69.697	ENSCHIG00000010604	SMNDC1	99	69.697	Capra_hircus
ENSEEUG00000013407	-	100	70.202	ENSTSYG00000026454	SMNDC1	83	70.202	Carlito_syrichta
ENSEEUG00000013407	-	81	62.733	ENSCAPG00000009132	SMNDC1	80	62.733	Cavia_aperea
ENSEEUG00000013407	-	100	69.697	ENSCPOG00000031666	SMNDC1	83	69.697	Cavia_porcellus
ENSEEUG00000013407	-	100	70.202	ENSCCAG00000021793	SMNDC1	83	70.202	Cebus_capucinus
ENSEEUG00000013407	-	100	69.697	ENSCATG00000035910	SMNDC1	83	69.697	Cercocebus_atys
ENSEEUG00000013407	-	100	69.697	ENSCLAG00000002838	SMNDC1	83	69.697	Chinchilla_lanigera
ENSEEUG00000013407	-	100	70.202	ENSCSAG00000005169	SMNDC1	83	70.202	Chlorocebus_sabaeus
ENSEEUG00000013407	-	77	62.745	ENSCHOG00000002936	SMNDC1	79	62.745	Choloepus_hoffmanni
ENSEEUG00000013407	-	100	68.182	ENSCPBG00000012837	SMNDC1	83	68.182	Chrysemys_picta_bellii
ENSEEUG00000013407	-	71	91.667	ENSCANG00000034620	-	61	91.667	Colobus_angolensis_palliatus
ENSEEUG00000013407	-	72	93.617	ENSCANG00000036994	-	64	93.617	Colobus_angolensis_palliatus
ENSEEUG00000013407	-	100	70.202	ENSCANG00000031720	-	83	70.202	Colobus_angolensis_palliatus
ENSEEUG00000013407	-	100	69.697	ENSCGRG00001012973	Smndc1	83	69.697	Cricetulus_griseus_chok1gshd
ENSEEUG00000013407	-	100	69.697	ENSCGRG00000012396	Smndc1	83	69.697	Cricetulus_griseus_crigri
ENSEEUG00000013407	-	72	86.458	ENSCSEG00000015621	smndc1	61	86.458	Cynoglossus_semilaevis
ENSEEUG00000013407	-	100	55.556	ENSCVAG00000020432	smndc1	83	55.556	Cyprinodon_variegatus
ENSEEUG00000013407	-	72	86.458	ENSDARG00000056235	smndc1	60	86.458	Danio_rerio
ENSEEUG00000013407	-	100	70.202	ENSDNOG00000016387	SMNDC1	69	70.202	Dasypus_novemcinctus
ENSEEUG00000013407	-	100	70.202	ENSDORG00000023715	Smndc1	83	70.202	Dipodomys_ordii
ENSEEUG00000013407	-	72	82.292	ENSEBUG00000010929	smndc1	60	82.292	Eptatretus_burgeri
ENSEEUG00000013407	-	100	70.202	ENSEASG00005014930	SMNDC1	83	70.202	Equus_asinus_asinus
ENSEEUG00000013407	-	100	70.202	ENSECAG00000029973	SMNDC1	83	70.202	Equus_caballus
ENSEEUG00000013407	-	100	55.051	ENSELUG00000000227	smndc1	61	84.375	Esox_lucius
ENSEEUG00000013407	-	100	70.202	ENSFCAG00000027353	SMNDC1	83	70.202	Felis_catus
ENSEEUG00000013407	-	100	68.182	ENSFALG00000002306	SMNDC1	83	68.182	Ficedula_albicollis
ENSEEUG00000013407	-	100	69.192	ENSFDAG00000006468	SMNDC1	83	69.192	Fukomys_damarensis
ENSEEUG00000013407	-	100	54.545	ENSFHEG00000020150	smndc1	83	54.545	Fundulus_heteroclitus
ENSEEUG00000013407	-	72	84.375	ENSGMOG00000016585	smndc1	61	84.375	Gadus_morhua
ENSEEUG00000013407	-	100	68.182	ENSGALG00000008561	SMNDC1	83	68.182	Gallus_gallus
ENSEEUG00000013407	-	100	54.040	ENSGAFG00000011582	smndc1	83	54.040	Gambusia_affinis
ENSEEUG00000013407	-	100	53.030	ENSGACG00000009468	smndc1	83	53.030	Gasterosteus_aculeatus
ENSEEUG00000013407	-	100	68.182	ENSGAGG00000024547	SMNDC1	83	68.182	Gopherus_agassizii
ENSEEUG00000013407	-	100	70.202	ENSGGOG00000010071	SMNDC1	99	70.202	Gorilla_gorilla
ENSEEUG00000013407	-	100	55.556	ENSHBUG00000017596	smndc1	83	55.556	Haplochromis_burtoni
ENSEEUG00000013407	-	100	69.192	ENSHGLG00000013390	-	83	69.192	Heterocephalus_glaber_female
ENSEEUG00000013407	-	67	83.721	ENSHGLG00000001157	-	57	87.013	Heterocephalus_glaber_female
ENSEEUG00000013407	-	67	83.721	ENSHGLG00100004278	-	53	87.013	Heterocephalus_glaber_male
ENSEEUG00000013407	-	100	69.192	ENSHGLG00100004814	-	83	69.192	Heterocephalus_glaber_male
ENSEEUG00000013407	-	100	54.774	ENSHCOG00000000783	smndc1	83	54.271	Hippocampus_comes
ENSEEUG00000013407	-	100	57.071	ENSIPUG00000004217	smndc1	83	57.071	Ictalurus_punctatus
ENSEEUG00000013407	-	100	70.202	ENSSTOG00000006088	SMNDC1	83	70.202	Ictidomys_tridecemlineatus
ENSEEUG00000013407	-	100	69.192	ENSJJAG00000019974	Smndc1	83	69.192	Jaculus_jaculus
ENSEEUG00000013407	-	100	54.040	ENSKMAG00000020134	smndc1	83	54.040	Kryptolebias_marmoratus
ENSEEUG00000013407	-	100	51.010	ENSLBEG00000004598	smndc1	83	51.010	Labrus_bergylta
ENSEEUG00000013407	-	100	62.121	ENSLACG00000007784	SMNDC1	83	62.121	Latimeria_chalumnae
ENSEEUG00000013407	-	100	59.596	ENSLOCG00000012355	smndc1	83	59.596	Lepisosteus_oculatus
ENSEEUG00000013407	-	100	69.697	ENSLAFG00000014353	SMNDC1	83	69.697	Loxodonta_africana
ENSEEUG00000013407	-	100	70.202	ENSMFAG00000002433	-	83	70.202	Macaca_fascicularis
ENSEEUG00000013407	-	100	70.202	ENSMMUG00000007775	SMNDC1	83	70.202	Macaca_mulatta
ENSEEUG00000013407	-	69	92.683	ENSMNEG00000033853	-	59	86.667	Macaca_nemestrina
ENSEEUG00000013407	-	100	70.202	ENSMNEG00000042963	-	83	70.202	Macaca_nemestrina
ENSEEUG00000013407	-	69	97.872	ENSMLEG00000040236	SMNDC1	53	97.872	Mandrillus_leucophaeus
ENSEEUG00000013407	-	87	46.243	ENSMAMG00000018233	smndc1	71	46.243	Mastacembelus_armatus
ENSEEUG00000013407	-	100	55.556	ENSMZEG00005027510	smndc1	83	55.556	Maylandia_zebra
ENSEEUG00000013407	-	100	67.677	ENSMGAG00000010777	SMNDC1	84	67.677	Meleagris_gallopavo
ENSEEUG00000013407	-	100	70.202	ENSMAUG00000012243	-	83	70.202	Mesocricetus_auratus
ENSEEUG00000013407	-	100	58.586	ENSMICG00000031640	-	82	58.586	Microcebus_murinus
ENSEEUG00000013407	-	100	69.192	ENSMICG00000027336	-	99	69.192	Microcebus_murinus
ENSEEUG00000013407	-	100	70.202	ENSMOCG00000002458	Smndc1	83	70.202	Microtus_ochrogaster
ENSEEUG00000013407	-	100	53.535	ENSMMOG00000008856	smndc1	83	53.535	Mola_mola
ENSEEUG00000013407	-	100	69.697	ENSMODG00000010542	SMNDC1	83	69.697	Monodelphis_domestica
ENSEEUG00000013407	-	100	55.051	ENSMALG00000017598	smndc1	83	55.051	Monopterus_albus
ENSEEUG00000013407	-	100	69.192	MGP_CAROLIEiJ_G0023072	Smndc1	83	69.192	Mus_caroli
ENSEEUG00000013407	-	100	69.697	ENSMUSG00000025024	Smndc1	83	69.697	Mus_musculus
ENSEEUG00000013407	-	100	69.697	MGP_PahariEiJ_G0014560	Smndc1	83	69.697	Mus_pahari
ENSEEUG00000013407	-	100	69.697	MGP_SPRETEiJ_G0023993	Smndc1	83	69.697	Mus_spretus
ENSEEUG00000013407	-	100	70.202	ENSMPUG00000002089	SMNDC1	83	70.202	Mustela_putorius_furo
ENSEEUG00000013407	-	100	69.697	ENSMLUG00000016007	SMNDC1	83	69.697	Myotis_lucifugus
ENSEEUG00000013407	-	100	70.202	ENSNGAG00000006833	Smndc1	83	70.202	Nannospalax_galili
ENSEEUG00000013407	-	100	55.051	ENSNBRG00000017089	smndc1	83	55.051	Neolamprologus_brichardi
ENSEEUG00000013407	-	100	70.202	ENSNLEG00000015471	SMNDC1	83	70.202	Nomascus_leucogenys
ENSEEUG00000013407	-	99	43.000	ENSMEUG00000010120	-	75	66.667	Notamacropus_eugenii
ENSEEUG00000013407	-	100	69.697	ENSOPRG00000015348	SMNDC1	83	69.697	Ochotona_princeps
ENSEEUG00000013407	-	70	95.349	ENSODEG00000007594	-	63	95.349	Octodon_degus
ENSEEUG00000013407	-	100	55.051	ENSONIG00000000434	smndc1	83	55.051	Oreochromis_niloticus
ENSEEUG00000013407	-	100	68.182	ENSOANG00000001598	SMNDC1	83	68.182	Ornithorhynchus_anatinus
ENSEEUG00000013407	-	72	85.106	ENSOCUG00000012274	-	58	85.106	Oryctolagus_cuniculus
ENSEEUG00000013407	-	100	69.192	ENSOCUG00000008145	-	83	69.192	Oryctolagus_cuniculus
ENSEEUG00000013407	-	100	55.556	ENSORLG00000005934	smndc1	79	55.556	Oryzias_latipes
ENSEEUG00000013407	-	100	55.556	ENSORLG00020008796	smndc1	79	55.556	Oryzias_latipes_hni
ENSEEUG00000013407	-	100	55.556	ENSORLG00015013666	smndc1	83	55.556	Oryzias_latipes_hsok
ENSEEUG00000013407	-	72	88.542	ENSOMEG00000007590	smndc1	60	88.542	Oryzias_melastigma
ENSEEUG00000013407	-	100	69.697	ENSOGAG00000000571	SMNDC1	83	69.697	Otolemur_garnettii
ENSEEUG00000013407	-	100	69.697	ENSOARG00000009500	SMNDC1	83	69.697	Ovis_aries
ENSEEUG00000013407	-	100	70.202	ENSPPAG00000027815	SMNDC1	99	70.202	Pan_paniscus
ENSEEUG00000013407	-	100	70.202	ENSPPRG00000013749	SMNDC1	83	70.202	Panthera_pardus
ENSEEUG00000013407	-	100	70.202	ENSPTIG00000011451	SMNDC1	83	70.202	Panthera_tigris_altaica
ENSEEUG00000013407	-	100	70.202	ENSPTRG00000002937	SMNDC1	99	70.202	Pan_troglodytes
ENSEEUG00000013407	-	72	97.872	ENSPANG00000031346	-	62	97.872	Papio_anubis
ENSEEUG00000013407	-	100	70.202	ENSPANG00000020805	-	83	70.202	Papio_anubis
ENSEEUG00000013407	-	100	57.576	ENSPKIG00000017164	smndc1	60	88.542	Paramormyrops_kingsleyae
ENSEEUG00000013407	-	100	67.677	ENSPSIG00000012257	SMNDC1	83	67.677	Pelodiscus_sinensis
ENSEEUG00000013407	-	100	52.020	ENSPMGG00000015651	smndc1	60	83.333	Periophthalmus_magnuspinnatus
ENSEEUG00000013407	-	100	70.202	ENSPEMG00000022058	Smndc1	83	70.202	Peromyscus_maniculatus_bairdii
ENSEEUG00000013407	-	72	76.042	ENSPMAG00000007705	smndc1	60	76.042	Petromyzon_marinus
ENSEEUG00000013407	-	83	48.485	ENSPCIG00000009693	-	81	48.485	Phascolarctos_cinereus
ENSEEUG00000013407	-	100	69.697	ENSPCIG00000018419	SMNDC1	83	69.697	Phascolarctos_cinereus
ENSEEUG00000013407	-	100	54.545	ENSPFOG00000017113	smndc1	83	54.545	Poecilia_formosa
ENSEEUG00000013407	-	100	55.051	ENSPLAG00000010372	smndc1	83	55.051	Poecilia_latipinna
ENSEEUG00000013407	-	100	55.051	ENSPMEG00000012288	smndc1	83	55.051	Poecilia_mexicana
ENSEEUG00000013407	-	100	54.545	ENSPREG00000012279	smndc1	83	54.545	Poecilia_reticulata
ENSEEUG00000013407	-	100	70.202	ENSPPYG00000002643	SMNDC1	83	70.202	Pongo_abelii
ENSEEUG00000013407	-	77	62.092	ENSPCAG00000016183	SMNDC1	79	62.092	Procavia_capensis
ENSEEUG00000013407	-	100	69.697	ENSPCOG00000024343	SMNDC1	83	69.697	Propithecus_coquereli
ENSEEUG00000013407	-	100	96.970	ENSPVAG00000004368	SMNDC1	83	96.970	Pteropus_vampyrus
ENSEEUG00000013407	-	100	55.556	ENSPNYG00000024093	smndc1	86	55.556	Pundamilia_nyererei
ENSEEUG00000013407	-	100	55.556	ENSPNAG00000025285	smndc1	83	55.556	Pygocentrus_nattereri
ENSEEUG00000013407	-	100	69.192	ENSRNOG00000014833	Smndc1	83	69.192	Rattus_norvegicus
ENSEEUG00000013407	-	100	69.697	ENSRBIG00000000224	-	83	69.697	Rhinopithecus_bieti
ENSEEUG00000013407	-	72	93.617	ENSRBIG00000032452	-	58	93.617	Rhinopithecus_bieti
ENSEEUG00000013407	-	72	95.745	ENSRROG00000039125	-	58	95.745	Rhinopithecus_roxellana
ENSEEUG00000013407	-	100	70.202	ENSRROG00000044992	-	83	70.202	Rhinopithecus_roxellana
ENSEEUG00000013407	-	100	70.202	ENSSBOG00000026789	SMNDC1	99	70.202	Saimiri_boliviensis_boliviensis
ENSEEUG00000013407	-	100	69.697	ENSSHAG00000015189	SMNDC1	99	69.697	Sarcophilus_harrisii
ENSEEUG00000013407	-	72	87.500	ENSSFOG00015008311	smndc1	60	87.500	Scleropages_formosus
ENSEEUG00000013407	-	100	55.051	ENSSMAG00000020118	smndc1	83	55.051	Scophthalmus_maximus
ENSEEUG00000013407	-	100	54.545	ENSSDUG00000015330	smndc1	83	54.545	Seriola_dumerili
ENSEEUG00000013407	-	100	54.545	ENSSLDG00000017325	smndc1	83	54.545	Seriola_lalandi_dorsalis
ENSEEUG00000013407	-	100	70.202	ENSSARG00000006063	SMNDC1	83	70.202	Sorex_araneus
ENSEEUG00000013407	-	100	67.172	ENSSPUG00000004574	SMNDC1	83	67.172	Sphenodon_punctatus
ENSEEUG00000013407	-	100	53.535	ENSSPAG00000000338	smndc1	83	53.535	Stegastes_partitus
ENSEEUG00000013407	-	100	70.202	ENSSSCG00000030507	SMNDC1	99	70.202	Sus_scrofa
ENSEEUG00000013407	-	100	68.182	ENSTGUG00000010599	SMNDC1	83	68.182	Taeniopygia_guttata
ENSEEUG00000013407	-	100	53.030	ENSTRUG00000023281	smndc1	83	53.030	Takifugu_rubripes
ENSEEUG00000013407	-	100	53.030	ENSTNIG00000013331	smndc1	83	53.030	Tetraodon_nigroviridis
ENSEEUG00000013407	-	100	69.697	ENSTBEG00000014337	SMNDC1	83	69.697	Tupaia_belangeri
ENSEEUG00000013407	-	100	70.202	ENSUAMG00000008142	SMNDC1	99	70.202	Ursus_americanus
ENSEEUG00000013407	-	100	70.202	ENSUMAG00000023722	SMNDC1	83	70.202	Ursus_maritimus
ENSEEUG00000013407	-	100	70.202	ENSVPAG00000003402	SMNDC1	100	70.202	Vicugna_pacos
ENSEEUG00000013407	-	100	70.202	ENSVVUG00000007820	SMNDC1	83	70.202	Vulpes_vulpes
ENSEEUG00000013407	-	72	86.458	ENSXCOG00000009159	smndc1	61	86.458	Xiphophorus_couchianus
ENSEEUG00000013407	-	100	54.040	ENSXMAG00000012755	smndc1	83	54.040	Xiphophorus_maculatus