EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000013489 (Gene tree)
Gene ID: -
Gene Symbol: RBM38
Alias: HSRNASEB|RNPC1|SEB4D|dJ800J21.2|seb4B
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 33519 bases
Position: chrGeneScaffold_442:905-34423
Accession: 15818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000012289	RRM_1	PF00076.22	6.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000013474	RBM38-201	720	-	ENSEEUP00000012289	239 (aa)	-	UPI0000F62463

Gene Model

Click here to download ENSEEUG00000013489's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000013489's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000013489	RBM38	100	94.167	ENSG00000132819	RBM38	100	94.215	Homo_sapiens
ENSEEUG00000013489	RBM38	91	68.018	ENSAPOG00000009939	-	94	67.265	Acanthochromis_polyacanthus
ENSEEUG00000013489	RBM38	89	61.039	ENSAPOG00000003301	rbm38	91	60.173	Acanthochromis_polyacanthus
ENSEEUG00000013489	RBM38	89	57.082	ENSACIG00000000010	rbm38	91	56.223	Amphilophus_citrinellus
ENSEEUG00000013489	RBM38	89	68.950	ENSACIG00000012502	-	100	87.179	Amphilophus_citrinellus
ENSEEUG00000013489	RBM38	99	62.551	ENSAOCG00000012559	RBM38	99	63.934	Amphiprion_ocellaris
ENSEEUG00000013489	RBM38	89	61.039	ENSAOCG00000013497	-	91	60.173	Amphiprion_ocellaris
ENSEEUG00000013489	RBM38	99	59.259	ENSAPEG00000013137	rbm38	99	58.436	Amphiprion_percula
ENSEEUG00000013489	RBM38	91	63.180	ENSAPEG00000023581	-	95	63.180	Amphiprion_percula
ENSEEUG00000013489	RBM38	91	61.161	ENSATEG00000016366	rbm38	94	61.161	Anabas_testudineus
ENSEEUG00000013489	RBM38	89	65.368	ENSATEG00000016710	-	92	65.665	Anabas_testudineus
ENSEEUG00000013489	RBM38	91	76.471	ENSACAG00000016238	RBM38	90	75.113	Anolis_carolinensis
ENSEEUG00000013489	RBM38	91	93.548	ENSANAG00000031959	RBM38	100	95.041	Aotus_nancymaae
ENSEEUG00000013489	RBM38	89	65.929	ENSACLG00000019514	-	92	64.807	Astatotilapia_calliptera
ENSEEUG00000013489	RBM38	80	61.979	ENSAMXG00000038120	rbm38	68	67.485	Astyanax_mexicanus
ENSEEUG00000013489	RBM38	91	67.965	ENSAMXG00000015601	-	95	66.234	Astyanax_mexicanus
ENSEEUG00000013489	RBM38	100	93.333	ENSBTAG00000008105	RBM38	100	92.083	Bos_taurus
ENSEEUG00000013489	RBM38	58	60.145	WBGene00006321	sup-12	59	83.146	Caenorhabditis_elegans
ENSEEUG00000013489	RBM38	100	93.333	ENSCJAG00000019139	RBM38	100	95.041	Callithrix_jacchus
ENSEEUG00000013489	RBM38	100	93.750	ENSCAFG00020021943	RBM38	100	92.500	Canis_lupus_dingo
ENSEEUG00000013489	RBM38	100	92.500	ENSCHIG00000002609	RBM38	100	91.250	Capra_hircus
ENSEEUG00000013489	RBM38	100	93.333	ENSCPOG00000012781	RBM38	100	92.083	Cavia_porcellus
ENSEEUG00000013489	RBM38	100	93.333	ENSCCAG00000036872	RBM38	100	95.041	Cebus_capucinus
ENSEEUG00000013489	RBM38	100	94.167	ENSCATG00000032133	RBM38	100	95.041	Cercocebus_atys
ENSEEUG00000013489	RBM38	96	93.074	ENSCLAG00000005906	RBM38	100	91.775	Chinchilla_lanigera
ENSEEUG00000013489	RBM38	100	94.167	ENSCSAG00000015503	RBM38	100	92.917	Chlorocebus_sabaeus
ENSEEUG00000013489	RBM38	91	79.909	ENSCPBG00000024059	RBM38	100	78.539	Chrysemys_picta_bellii
ENSEEUG00000013489	RBM38	74	56.497	ENSCSAVG00000001132	-	59	62.025	Ciona_savignyi
ENSEEUG00000013489	RBM38	99	71.548	ENSCANG00000030105	-	89	70.293	Colobus_angolensis_palliatus
ENSEEUG00000013489	RBM38	100	89.167	ENSCGRG00001012928	Rbm38	100	87.917	Cricetulus_griseus_chok1gshd
ENSEEUG00000013489	RBM38	62	67.333	ENSCSEG00000020943	rbm38	55	63.905	Cynoglossus_semilaevis
ENSEEUG00000013489	RBM38	89	69.545	ENSCSEG00000004701	-	93	69.231	Cynoglossus_semilaevis
ENSEEUG00000013489	RBM38	89	67.094	ENSCVAG00000005472	-	92	66.239	Cyprinodon_variegatus
ENSEEUG00000013489	RBM38	89	57.511	ENSCVAG00000015952	rbm38	91	58.798	Cyprinodon_variegatus
ENSEEUG00000013489	RBM38	89	62.946	ENSDARG00000058818	rbm38	92	61.607	Danio_rerio
ENSEEUG00000013489	RBM38	91	87.097	ENSDNOG00000032004	RBM38	100	85.714	Dasypus_novemcinctus
ENSEEUG00000013489	RBM38	60	67.133	ENSEBUG00000015164	rbm38	86	67.133	Eptatretus_burgeri
ENSEEUG00000013489	RBM38	100	93.333	ENSECAG00000007700	RBM38	100	92.083	Equus_caballus
ENSEEUG00000013489	RBM38	91	63.866	ENSELUG00000005849	-	95	62.605	Esox_lucius
ENSEEUG00000013489	RBM38	84	64.179	ENSELUG00000000585	-	87	63.184	Esox_lucius
ENSEEUG00000013489	RBM38	100	94.167	ENSFCAG00000042916	RBM38	100	95.041	Felis_catus
ENSEEUG00000013489	RBM38	74	81.921	ENSFALG00000010805	RBM38	91	81.143	Ficedula_albicollis
ENSEEUG00000013489	RBM38	89	71.429	ENSFHEG00000006160	-	92	70.507	Fundulus_heteroclitus
ENSEEUG00000013489	RBM38	89	56.410	ENSFHEG00000017748	rbm38	91	55.556	Fundulus_heteroclitus
ENSEEUG00000013489	RBM38	76	70.330	ENSGMOG00000016655	-	96	72.678	Gadus_morhua
ENSEEUG00000013489	RBM38	91	77.626	ENSGALG00000026081	RBM38	100	77.169	Gallus_gallus
ENSEEUG00000013489	RBM38	90	67.111	ENSGACG00000009873	-	100	65.487	Gasterosteus_aculeatus
ENSEEUG00000013489	RBM38	89	62.736	ENSGACG00000015224	rbm38	97	62.911	Gasterosteus_aculeatus
ENSEEUG00000013489	RBM38	91	80.365	ENSGAGG00000001187	RBM38	100	78.995	Gopherus_agassizii
ENSEEUG00000013489	RBM38	93	58.228	ENSHBUG00000012058	rbm38	97	58.298	Haplochromis_burtoni
ENSEEUG00000013489	RBM38	89	70.183	ENSHBUG00000011778	-	91	69.406	Haplochromis_burtoni
ENSEEUG00000013489	RBM38	100	87.500	ENSHGLG00000015077	RBM38	100	88.333	Heterocephalus_glaber_female
ENSEEUG00000013489	RBM38	79	70.984	ENSHCOG00000005622	-	54	70.984	Hippocampus_comes
ENSEEUG00000013489	RBM38	63	64.901	ENSHCOG00000019040	rbm38	65	64.901	Hippocampus_comes
ENSEEUG00000013489	RBM38	91	64.807	ENSIPUG00000019349	-	95	63.948	Ictalurus_punctatus
ENSEEUG00000013489	RBM38	89	53.586	ENSKMAG00000012402	rbm38	98	53.165	Kryptolebias_marmoratus
ENSEEUG00000013489	RBM38	89	58.369	ENSLBEG00000018878	rbm38	91	57.511	Labrus_bergylta
ENSEEUG00000013489	RBM38	89	68.807	ENSLBEG00000016163	RBM38	97	63.761	Labrus_bergylta
ENSEEUG00000013489	RBM38	91	69.469	ENSLOCG00000003456	rbm38	95	68.142	Lepisosteus_oculatus
ENSEEUG00000013489	RBM38	98	94.068	ENSMFAG00000043808	RBM38	97	94.872	Macaca_fascicularis
ENSEEUG00000013489	RBM38	100	94.167	ENSMMUG00000031391	RBM38	100	95.041	Macaca_mulatta
ENSEEUG00000013489	RBM38	100	94.167	ENSMNEG00000034683	RBM38	100	95.041	Macaca_nemestrina
ENSEEUG00000013489	RBM38	89	58.547	ENSMAMG00000024135	rbm38	91	57.692	Mastacembelus_armatus
ENSEEUG00000013489	RBM38	91	62.712	ENSMAMG00000020499	RBM38	95	63.291	Mastacembelus_armatus
ENSEEUG00000013489	RBM38	89	70.183	ENSMZEG00005000849	-	91	69.406	Maylandia_zebra
ENSEEUG00000013489	RBM38	89	57.265	ENSMZEG00005026036	rbm38	91	56.410	Maylandia_zebra
ENSEEUG00000013489	RBM38	100	89.583	ENSMAUG00000021211	Rbm38	100	88.333	Mesocricetus_auratus
ENSEEUG00000013489	RBM38	91	95.392	ENSMICG00000038011	RBM38	100	94.009	Microcebus_murinus
ENSEEUG00000013489	RBM38	100	88.750	ENSMOCG00000008715	Rbm38	100	87.500	Microtus_ochrogaster
ENSEEUG00000013489	RBM38	99	65.560	ENSMMOG00000020051	-	99	64.876	Mola_mola
ENSEEUG00000013489	RBM38	100	77.593	ENSMODG00000016458	RBM38	100	76.763	Monodelphis_domestica
ENSEEUG00000013489	RBM38	91	55.909	ENSMALG00000022327	rbm38	67	70.323	Monopterus_albus
ENSEEUG00000013489	RBM38	78	71.134	ENSMALG00000004680	RBM38	71	70.103	Monopterus_albus
ENSEEUG00000013489	RBM38	100	87.500	MGP_CAROLIEiJ_G0024745	Rbm38	100	88.333	Mus_caroli
ENSEEUG00000013489	RBM38	100	87.917	ENSMUSG00000027510	Rbm38	100	88.750	Mus_musculus
ENSEEUG00000013489	RBM38	100	87.917	MGP_PahariEiJ_G0026186	Rbm38	100	88.750	Mus_pahari
ENSEEUG00000013489	RBM38	100	87.500	MGP_SPRETEiJ_G0025665	Rbm38	100	88.333	Mus_spretus
ENSEEUG00000013489	RBM38	78	97.312	ENSMPUG00000006518	RBM38	98	92.000	Mustela_putorius_furo
ENSEEUG00000013489	RBM38	91	89.401	ENSMLUG00000011140	RBM38	100	88.018	Myotis_lucifugus
ENSEEUG00000013489	RBM38	89	65.929	ENSNBRG00000022545	-	92	64.807	Neolamprologus_brichardi
ENSEEUG00000013489	RBM38	93	58.898	ENSNBRG00000022685	rbm38	96	58.898	Neolamprologus_brichardi
ENSEEUG00000013489	RBM38	57	77.372	ENSMEUG00000005475	-	100	77.372	Notamacropus_eugenii
ENSEEUG00000013489	RBM38	100	93.333	ENSODEG00000007980	RBM38	100	92.083	Octodon_degus
ENSEEUG00000013489	RBM38	88	57.759	ENSONIG00000017073	rbm38	92	56.897	Oreochromis_niloticus
ENSEEUG00000013489	RBM38	89	65.778	ENSONIG00000020324	-	92	64.655	Oreochromis_niloticus
ENSEEUG00000013489	RBM38	97	76.293	ENSOANG00000009259	RBM38	90	75.000	Ornithorhynchus_anatinus
ENSEEUG00000013489	RBM38	89	54.894	ENSORLG00000012154	rbm38	91	54.894	Oryzias_latipes
ENSEEUG00000013489	RBM38	89	61.638	ENSORLG00000027180	-	92	63.675	Oryzias_latipes
ENSEEUG00000013489	RBM38	92	59.274	ENSORLG00020020751	-	95	61.446	Oryzias_latipes_hni
ENSEEUG00000013489	RBM38	89	57.265	ENSORLG00020017871	rbm38	91	57.265	Oryzias_latipes_hni
ENSEEUG00000013489	RBM38	89	61.905	ENSORLG00015017040	-	92	64.957	Oryzias_latipes_hsok
ENSEEUG00000013489	RBM38	97	57.203	ENSORLG00015012606	rbm38	97	57.203	Oryzias_latipes_hsok
ENSEEUG00000013489	RBM38	89	62.174	ENSOMEG00000023912	-	92	63.362	Oryzias_melastigma
ENSEEUG00000013489	RBM38	83	62.069	ENSOMEG00000006805	rbm38	80	62.069	Oryzias_melastigma
ENSEEUG00000013489	RBM38	100	93.361	ENSOGAG00000029136	RBM38	100	92.116	Otolemur_garnettii
ENSEEUG00000013489	RBM38	100	94.167	ENSPPRG00000009507	RBM38	100	95.041	Panthera_pardus
ENSEEUG00000013489	RBM38	87	91.866	ENSPTRG00000013661	RBM38	100	94.215	Pan_troglodytes
ENSEEUG00000013489	RBM38	52	96.774	ENSPTRG00000045845	-	68	96.774	Pan_troglodytes
ENSEEUG00000013489	RBM38	100	94.167	ENSPANG00000020919	-	100	95.041	Papio_anubis
ENSEEUG00000013489	RBM38	99	73.109	ENSPANG00000033127	-	100	71.849	Papio_anubis
ENSEEUG00000013489	RBM38	92	63.900	ENSPKIG00000025417	rbm38	97	62.656	Paramormyrops_kingsleyae
ENSEEUG00000013489	RBM38	92	66.667	ENSPKIG00000018122	-	100	86.325	Paramormyrops_kingsleyae
ENSEEUG00000013489	RBM38	93	79.556	ENSPSIG00000011649	RBM38	95	78.222	Pelodiscus_sinensis
ENSEEUG00000013489	RBM38	91	56.723	ENSPMGG00000011343	rbm38	94	57.983	Periophthalmus_magnuspinnatus
ENSEEUG00000013489	RBM38	89	61.111	ENSPMGG00000017094	-	92	61.702	Periophthalmus_magnuspinnatus
ENSEEUG00000013489	RBM38	100	78.423	ENSPCIG00000013648	RBM38	100	77.178	Phascolarctos_cinereus
ENSEEUG00000013489	RBM38	89	54.043	ENSPFOG00000011658	rbm38	91	56.596	Poecilia_formosa
ENSEEUG00000013489	RBM38	89	67.227	ENSPLAG00000002500	-	92	66.245	Poecilia_latipinna
ENSEEUG00000013489	RBM38	89	54.894	ENSPLAG00000005218	rbm38	91	56.596	Poecilia_latipinna
ENSEEUG00000013489	RBM38	89	54.468	ENSPMEG00000015770	rbm38	91	56.596	Poecilia_mexicana
ENSEEUG00000013489	RBM38	89	54.468	ENSPREG00000007398	rbm38	91	57.021	Poecilia_reticulata
ENSEEUG00000013489	RBM38	100	93.361	ENSPCOG00000026201	RBM38	100	93.443	Propithecus_coquereli
ENSEEUG00000013489	RBM38	100	66.946	ENSPVAG00000006457	RBM38	100	65.690	Pteropus_vampyrus
ENSEEUG00000013489	RBM38	93	58.798	ENSPNYG00000021373	rbm38	97	58.898	Pundamilia_nyererei
ENSEEUG00000013489	RBM38	89	69.863	ENSPNYG00000019727	-	100	88.034	Pundamilia_nyererei
ENSEEUG00000013489	RBM38	85	63.084	ENSPNAG00000010596	rbm38	88	61.682	Pygocentrus_nattereri
ENSEEUG00000013489	RBM38	91	66.516	ENSPNAG00000015123	-	96	77.273	Pygocentrus_nattereri
ENSEEUG00000013489	RBM38	100	90.000	ENSRNOG00000006420	Rbm38	100	88.750	Rattus_norvegicus
ENSEEUG00000013489	RBM38	100	76.250	ENSRROG00000036388	-	100	75.000	Rhinopithecus_roxellana
ENSEEUG00000013489	RBM38	91	93.548	ENSSBOG00000031053	RBM38	99	95.283	Saimiri_boliviensis_boliviensis
ENSEEUG00000013489	RBM38	89	66.516	ENSSFOG00015004453	rbm38	92	68.326	Scleropages_formosus
ENSEEUG00000013489	RBM38	92	63.265	ENSSDUG00000021082	RBM38	92	64.957	Seriola_dumerili
ENSEEUG00000013489	RBM38	89	58.974	ENSSDUG00000022611	rbm38	91	58.120	Seriola_dumerili
ENSEEUG00000013489	RBM38	89	63.426	ENSSLDG00000010845	rbm38	90	62.500	Seriola_lalandi_dorsalis
ENSEEUG00000013489	RBM38	89	65.236	ENSSLDG00000011778	RBM38	92	64.957	Seriola_lalandi_dorsalis
ENSEEUG00000013489	RBM38	89	57.692	ENSSPAG00000011113	rbm38	91	56.838	Stegastes_partitus
ENSEEUG00000013489	RBM38	89	65.888	ENSSPAG00000020989	RBM38	91	68.056	Stegastes_partitus
ENSEEUG00000013489	RBM38	100	94.583	ENSSSCG00000007504	RBM38	100	93.333	Sus_scrofa
ENSEEUG00000013489	RBM38	89	66.379	ENSTRUG00000019869	-	92	65.812	Takifugu_rubripes
ENSEEUG00000013489	RBM38	89	55.459	ENSTRUG00000024954	rbm38	67	67.665	Takifugu_rubripes
ENSEEUG00000013489	RBM38	89	68.919	ENSTNIG00000007093	-	97	68.610	Tetraodon_nigroviridis
ENSEEUG00000013489	RBM38	100	94.583	ENSUAMG00000019780	RBM38	100	93.333	Ursus_americanus
ENSEEUG00000013489	RBM38	100	93.750	ENSVVUG00000017246	RBM38	100	92.500	Vulpes_vulpes
ENSEEUG00000013489	RBM38	92	70.796	ENSXETG00000011268	rbm38	100	71.239	Xenopus_tropicalis
ENSEEUG00000013489	RBM38	89	56.410	ENSXMAG00000023662	rbm38	91	56.838	Xiphophorus_maculatus