EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000013974 (Gene tree)
Gene ID: -
Gene Symbol: RBFOX3
Alias: FOX-3|HRNBP3|NeuN
Full Name: RNA binding fox-1 homolog 3
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 249168 bases
Position: chrGeneScaffold_6585:3727-252894
Accession: 27097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000012745	Fox-1_C	PF12414.8	5.9e-21	1	1
ENSEEUP00000012745	RRM_1	PF00076.22	2.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000013976	RBFOX3-201	1119	-	ENSEEUP00000012745	372 (aa)	-	UPI0000F6409B

Gene Model

Click here to download ENSEEUG00000013974's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000013974's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000013974	RBFOX3	73	59.694	ENSEEUG00000004549	RBFOX2	70	59.487

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000013974	RBFOX3	92	81.449	ENSG00000167281	RBFOX3	99	97.333	Homo_sapiens
ENSEEUG00000013974	RBFOX3	66	87.500	ENSAPOG00000015658	-	66	87.500	Acanthochromis_polyacanthus
ENSEEUG00000013974	RBFOX3	76	88.000	ENSAPOG00000021630	rbfox3b	73	78.824	Acanthochromis_polyacanthus
ENSEEUG00000013974	RBFOX3	73	93.434	ENSAMEG00000014170	RBFOX3	79	93.434	Ailuropoda_melanoleuca
ENSEEUG00000013974	RBFOX3	56	76.190	ENSACIG00000003768	-	54	76.410	Amphilophus_citrinellus
ENSEEUG00000013974	RBFOX3	69	82.353	ENSACIG00000010817	rbfox3b	80	78.431	Amphilophus_citrinellus
ENSEEUG00000013974	RBFOX3	72	86.885	ENSAOCG00000012358	rbfox3b	72	76.056	Amphiprion_ocellaris
ENSEEUG00000013974	RBFOX3	66	84.615	ENSAOCG00000010786	-	67	84.615	Amphiprion_ocellaris
ENSEEUG00000013974	RBFOX3	68	77.778	ENSAPEG00000019081	rbfox3b	66	87.879	Amphiprion_percula
ENSEEUG00000013974	RBFOX3	65	87.500	ENSAPEG00000015891	-	62	87.500	Amphiprion_percula
ENSEEUG00000013974	RBFOX3	74	76.190	ENSATEG00000019945	rbfox3b	74	75.897	Anabas_testudineus
ENSEEUG00000013974	RBFOX3	69	76.923	ENSATEG00000023101	-	84	72.449	Anabas_testudineus
ENSEEUG00000013974	RBFOX3	72	91.803	ENSACAG00000016093	RBFOX3	73	85.052	Anolis_carolinensis
ENSEEUG00000013974	RBFOX3	94	72.365	ENSANAG00000023457	RBFOX3	86	92.424	Aotus_nancymaae
ENSEEUG00000013974	RBFOX3	76	89.333	ENSACLG00000025552	-	75	81.690	Astatotilapia_calliptera
ENSEEUG00000013974	RBFOX3	76	88.000	ENSACLG00000020011	rbfox3b	84	76.056	Astatotilapia_calliptera
ENSEEUG00000013974	RBFOX3	68	93.443	ENSAMXG00000037246	rbfox3a	79	84.507	Astyanax_mexicanus
ENSEEUG00000013974	RBFOX3	72	81.967	ENSAMXG00000042841	rbfox3b	76	71.282	Astyanax_mexicanus
ENSEEUG00000013974	RBFOX3	94	72.080	ENSBTAG00000006280	RBFOX3	97	71.510	Bos_taurus
ENSEEUG00000013974	RBFOX3	92	80.580	ENSCJAG00000009563	RBFOX3	96	80.000	Callithrix_jacchus
ENSEEUG00000013974	RBFOX3	56	95.489	ENSCAFG00000005547	RBFOX3	87	95.489	Canis_familiaris
ENSEEUG00000013974	RBFOX3	98	82.466	ENSCAFG00020008126	RBFOX3	98	81.918	Canis_lupus_dingo
ENSEEUG00000013974	RBFOX3	98	79.452	ENSCHIG00000009124	RBFOX3	98	80.822	Capra_hircus
ENSEEUG00000013974	RBFOX3	92	82.319	ENSTSYG00000029617	RBFOX3	96	82.319	Carlito_syrichta
ENSEEUG00000013974	RBFOX3	98	82.016	ENSCPOG00000021703	RBFOX3	98	81.471	Cavia_porcellus
ENSEEUG00000013974	RBFOX3	94	72.365	ENSCCAG00000028450	RBFOX3	86	92.424	Cebus_capucinus
ENSEEUG00000013974	RBFOX3	92	76.301	ENSCATG00000018349	RBFOX3	86	93.939	Cercocebus_atys
ENSEEUG00000013974	RBFOX3	98	82.740	ENSCLAG00000006449	RBFOX3	98	82.740	Chinchilla_lanigera
ENSEEUG00000013974	RBFOX3	70	94.444	ENSCSAG00000002355	RBFOX3	86	94.444	Chlorocebus_sabaeus
ENSEEUG00000013974	RBFOX3	72	85.333	ENSCPBG00000010904	RBFOX3	84	84.375	Chrysemys_picta_bellii
ENSEEUG00000013974	RBFOX3	98	83.014	ENSCANG00000043120	RBFOX3	98	82.466	Colobus_angolensis_palliatus
ENSEEUG00000013974	RBFOX3	98	79.508	ENSCGRG00001019476	Rbfox3	98	81.421	Cricetulus_griseus_chok1gshd
ENSEEUG00000013974	RBFOX3	98	79.508	ENSCGRG00000003268	Rbfox3	98	81.421	Cricetulus_griseus_crigri
ENSEEUG00000013974	RBFOX3	76	65.094	ENSCSEG00000020606	RBFOX3	74	66.667	Cynoglossus_semilaevis
ENSEEUG00000013974	RBFOX3	69	86.000	ENSCSEG00000015567	RBFOX3	67	86.000	Cynoglossus_semilaevis
ENSEEUG00000013974	RBFOX3	72	86.885	ENSCVAG00000006882	rbfox3b	71	76.056	Cyprinodon_variegatus
ENSEEUG00000013974	RBFOX3	76	82.667	ENSDARG00000074310	rbfox3b	85	71.508	Danio_rerio
ENSEEUG00000013974	RBFOX3	68	93.443	ENSDARG00000010083	rbfox3a	81	84.507	Danio_rerio
ENSEEUG00000013974	RBFOX3	82	73.377	ENSDNOG00000039391	RBFOX3	81	72.727	Dasypus_novemcinctus
ENSEEUG00000013974	RBFOX3	96	71.508	ENSDORG00000005352	Rbfox3	96	70.391	Dipodomys_ordii
ENSEEUG00000013974	RBFOX3	76	70.886	ENSEBUG00000002129	RBFOX3	83	70.652	Eptatretus_burgeri
ENSEEUG00000013974	RBFOX3	68	93.750	ENSEASG00005005059	RBFOX3	84	93.750	Equus_asinus_asinus
ENSEEUG00000013974	RBFOX3	68	93.548	ENSECAG00000023811	RBFOX3	84	93.229	Equus_caballus
ENSEEUG00000013974	RBFOX3	76	88.000	ENSELUG00000017963	rbfox3b	83	80.000	Esox_lucius
ENSEEUG00000013974	RBFOX3	51	64.583	ENSELUG00000009807	-	50	68.605	Esox_lucius
ENSEEUG00000013974	RBFOX3	73	94.444	ENSFCAG00000002555	RBFOX3	87	94.444	Felis_catus
ENSEEUG00000013974	RBFOX3	73	86.458	ENSFALG00000012288	RBFOX3	74	86.458	Ficedula_albicollis
ENSEEUG00000013974	RBFOX3	98	93.889	ENSFDAG00000007489	RBFOX3	85	93.889	Fukomys_damarensis
ENSEEUG00000013974	RBFOX3	72	86.885	ENSFHEG00000008550	rbfox3b	82	76.056	Fundulus_heteroclitus
ENSEEUG00000013974	RBFOX3	76	88.000	ENSGMOG00000019304	-	63	85.333	Gadus_morhua
ENSEEUG00000013974	RBFOX3	68	93.443	ENSGALG00000032889	RBFOX3	73	87.500	Gallus_gallus
ENSEEUG00000013974	RBFOX3	70	85.246	ENSGAFG00000005025	rbfox3b	77	75.385	Gambusia_affinis
ENSEEUG00000013974	RBFOX3	96	61.475	ENSGACG00000002138	-	96	61.475	Gasterosteus_aculeatus
ENSEEUG00000013974	RBFOX3	72	86.667	ENSGAGG00000020025	RBFOX3	84	84.507	Gopherus_agassizii
ENSEEUG00000013974	RBFOX3	98	82.740	ENSGGOG00000012546	RBFOX3	98	82.192	Gorilla_gorilla
ENSEEUG00000013974	RBFOX3	76	88.000	ENSHBUG00000018099	rbfox3b	73	78.824	Haplochromis_burtoni
ENSEEUG00000013974	RBFOX3	76	88.000	ENSHBUG00000023098	-	80	81.176	Haplochromis_burtoni
ENSEEUG00000013974	RBFOX3	98	81.301	ENSHGLG00000008679	RBFOX3	98	81.030	Heterocephalus_glaber_female
ENSEEUG00000013974	RBFOX3	98	81.843	ENSHGLG00100014739	RBFOX3	98	82.114	Heterocephalus_glaber_male
ENSEEUG00000013974	RBFOX3	68	82.979	ENSHCOG00000001863	RBFOX3	76	81.250	Hippocampus_comes
ENSEEUG00000013974	RBFOX3	70	75.258	ENSHCOG00000007444	RBFOX3	69	75.521	Hippocampus_comes
ENSEEUG00000013974	RBFOX3	72	92.000	ENSIPUG00000012010	rbfox3a	79	83.099	Ictalurus_punctatus
ENSEEUG00000013974	RBFOX3	73	73.430	ENSIPUG00000021966	rbfox3b	72	72.917	Ictalurus_punctatus
ENSEEUG00000013974	RBFOX3	81	96.721	ENSSTOG00000026817	RBFOX3	97	96.721	Ictidomys_tridecemlineatus
ENSEEUG00000013974	RBFOX3	98	83.014	ENSJJAG00000014167	Rbfox3	98	82.466	Jaculus_jaculus
ENSEEUG00000013974	RBFOX3	72	86.885	ENSKMAG00000006726	rbfox3b	75	75.385	Kryptolebias_marmoratus
ENSEEUG00000013974	RBFOX3	68	88.525	ENSLBEG00000022508	-	72	80.282	Labrus_bergylta
ENSEEUG00000013974	RBFOX3	76	88.000	ENSLBEG00000004030	rbfox3b	80	76.471	Labrus_bergylta
ENSEEUG00000013974	RBFOX3	72	82.292	ENSLACG00000018409	-	93	59.640	Latimeria_chalumnae
ENSEEUG00000013974	RBFOX3	72	93.333	ENSLOCG00000012267	rbfox3a	80	84.507	Lepisosteus_oculatus
ENSEEUG00000013974	RBFOX3	98	81.319	ENSLAFG00000016623	RBFOX3	98	81.319	Loxodonta_africana
ENSEEUG00000013974	RBFOX3	98	77.808	ENSMFAG00000002247	RBFOX3	96	80.870	Macaca_fascicularis
ENSEEUG00000013974	RBFOX3	94	73.219	ENSMMUG00000023028	RBFOX3	86	93.939	Macaca_mulatta
ENSEEUG00000013974	RBFOX3	98	77.808	ENSMNEG00000041147	RBFOX3	86	93.939	Macaca_nemestrina
ENSEEUG00000013974	RBFOX3	92	76.301	ENSMLEG00000025686	RBFOX3	86	93.939	Mandrillus_leucophaeus
ENSEEUG00000013974	RBFOX3	69	82.353	ENSMAMG00000019810	rbfox3b	80	78.431	Mastacembelus_armatus
ENSEEUG00000013974	RBFOX3	68	74.359	ENSMAMG00000020600	-	76	74.359	Mastacembelus_armatus
ENSEEUG00000013974	RBFOX3	76	88.000	ENSMZEG00005000781	rbfox3b	73	78.824	Maylandia_zebra
ENSEEUG00000013974	RBFOX3	52	87.500	ENSMGAG00000005600	RBFOX3	73	87.500	Meleagris_gallopavo
ENSEEUG00000013974	RBFOX3	96	81.111	ENSMAUG00000013543	Rbfox3	96	81.111	Mesocricetus_auratus
ENSEEUG00000013974	RBFOX3	100	80.749	ENSMICG00000014898	RBFOX3	85	93.750	Microcebus_murinus
ENSEEUG00000013974	RBFOX3	98	81.644	ENSMOCG00000015373	Rbfox3	98	81.644	Microtus_ochrogaster
ENSEEUG00000013974	RBFOX3	72	85.246	ENSMMOG00000020193	rbfox3b	81	75.648	Mola_mola
ENSEEUG00000013974	RBFOX3	68	91.803	ENSMODG00000002089	RBFOX3	73	88.021	Monodelphis_domestica
ENSEEUG00000013974	RBFOX3	76	88.000	ENSMALG00000020407	rbfox3b	72	78.824	Monopterus_albus
ENSEEUG00000013974	RBFOX3	76	89.333	ENSMALG00000018270	-	78	86.275	Monopterus_albus
ENSEEUG00000013974	RBFOX3	98	81.918	MGP_CAROLIEiJ_G0017487	Rbfox3	95	92.500	Mus_caroli
ENSEEUG00000013974	RBFOX3	98	82.192	ENSMUSG00000025576	Rbfox3	95	93.125	Mus_musculus
ENSEEUG00000013974	RBFOX3	98	80.055	MGP_PahariEiJ_G0018614	Rbfox3	95	92.500	Mus_pahari
ENSEEUG00000013974	RBFOX3	98	82.192	MGP_SPRETEiJ_G0018331	Rbfox3	95	92.500	Mus_spretus
ENSEEUG00000013974	RBFOX3	98	67.102	ENSMPUG00000012319	RBFOX3	74	94.444	Mustela_putorius_furo
ENSEEUG00000013974	RBFOX3	98	81.918	ENSNGAG00000018006	Rbfox3	98	81.918	Nannospalax_galili
ENSEEUG00000013974	RBFOX3	65	87.879	ENSNBRG00000022885	-	65	87.879	Neolamprologus_brichardi
ENSEEUG00000013974	RBFOX3	72	85.246	ENSNBRG00000010102	rbfox3b	65	86.667	Neolamprologus_brichardi
ENSEEUG00000013974	RBFOX3	59	92.857	ENSNLEG00000000153	-	79	92.857	Nomascus_leucogenys
ENSEEUG00000013974	RBFOX3	94	51.852	ENSMEUG00000004218	-	97	51.282	Notamacropus_eugenii
ENSEEUG00000013974	RBFOX3	66	91.716	ENSOPRG00000016279	-	73	91.716	Ochotona_princeps
ENSEEUG00000013974	RBFOX3	98	82.740	ENSODEG00000009433	RBFOX3	98	82.740	Octodon_degus
ENSEEUG00000013974	RBFOX3	72	90.164	ENSONIG00000007282	-	77	81.690	Oreochromis_niloticus
ENSEEUG00000013974	RBFOX3	100	65.782	ENSONIG00000009549	rbfox3b	96	63.812	Oreochromis_niloticus
ENSEEUG00000013974	RBFOX3	82	72.876	ENSOCUG00000014217	RBFOX3	81	73.529	Oryctolagus_cuniculus
ENSEEUG00000013974	RBFOX3	76	89.333	ENSORLG00000000905	rbfox3b	60	80.000	Oryzias_latipes
ENSEEUG00000013974	RBFOX3	76	89.333	ENSORLG00020018030	rbfox3b	78	77.465	Oryzias_latipes_hni
ENSEEUG00000013974	RBFOX3	76	88.000	ENSORLG00015009200	rbfox3b	82	76.056	Oryzias_latipes_hsok
ENSEEUG00000013974	RBFOX3	56	71.681	ENSOMEG00000014677	rbfox3b	55	70.142	Oryzias_melastigma
ENSEEUG00000013974	RBFOX3	72	92.188	ENSOGAG00000029595	RBFOX3	81	92.188	Otolemur_garnettii
ENSEEUG00000013974	RBFOX3	70	72.432	ENSOARG00000002908	RBFOX3	74	73.596	Ovis_aries
ENSEEUG00000013974	RBFOX3	80	79.933	ENSPPAG00000025383	RBFOX3	80	93.939	Pan_paniscus
ENSEEUG00000013974	RBFOX3	92	79.710	ENSPPRG00000007819	RBFOX3	96	79.130	Panthera_pardus
ENSEEUG00000013974	RBFOX3	98	82.740	ENSPTRG00000009727	RBFOX3	98	82.192	Pan_troglodytes
ENSEEUG00000013974	RBFOX3	92	76.301	ENSPANG00000019837	RBFOX3	86	93.939	Papio_anubis
ENSEEUG00000013974	RBFOX3	78	70.588	ENSPKIG00000022633	-	74	66.321	Paramormyrops_kingsleyae
ENSEEUG00000013974	RBFOX3	72	92.000	ENSPKIG00000010299	rbfox3a	71	84.706	Paramormyrops_kingsleyae
ENSEEUG00000013974	RBFOX3	56	77.619	ENSPMGG00000008000	rbfox3b	60	76.923	Periophthalmus_magnuspinnatus
ENSEEUG00000013974	RBFOX3	98	81.644	ENSPEMG00000010500	Rbfox3	98	81.644	Peromyscus_maniculatus_bairdii
ENSEEUG00000013974	RBFOX3	96	75.978	ENSPCIG00000005766	RBFOX3	96	77.391	Phascolarctos_cinereus
ENSEEUG00000013974	RBFOX3	76	88.000	ENSPFOG00000018294	rbfox3b	71	80.000	Poecilia_formosa
ENSEEUG00000013974	RBFOX3	53	85.484	ENSPLAG00000000481	rbfox3b	65	83.453	Poecilia_latipinna
ENSEEUG00000013974	RBFOX3	72	86.885	ENSPMEG00000022997	rbfox3b	82	76.056	Poecilia_mexicana
ENSEEUG00000013974	RBFOX3	72	86.885	ENSPREG00000012886	rbfox3b	76	76.410	Poecilia_reticulata
ENSEEUG00000013974	RBFOX3	69	93.333	ENSPPYG00000008704	RBFOX3	82	93.333	Pongo_abelii
ENSEEUG00000013974	RBFOX3	92	79.360	ENSPCAG00000001401	RBFOX3	96	79.360	Procavia_capensis
ENSEEUG00000013974	RBFOX3	99	79.357	ENSPCOG00000012689	RBFOX3	97	80.870	Propithecus_coquereli
ENSEEUG00000013974	RBFOX3	75	88.506	ENSPVAG00000015243	RBFOX3	78	92.593	Pteropus_vampyrus
ENSEEUG00000013974	RBFOX3	65	85.294	ENSPNYG00000009079	-	63	85.294	Pundamilia_nyererei
ENSEEUG00000013974	RBFOX3	64	86.667	ENSPNYG00000010414	rbfox3b	65	86.667	Pundamilia_nyererei
ENSEEUG00000013974	RBFOX3	72	93.333	ENSPNAG00000002889	rbfox3a	73	85.882	Pygocentrus_nattereri
ENSEEUG00000013974	RBFOX3	70	80.769	ENSPNAG00000018173	rbfox3b	71	78.846	Pygocentrus_nattereri
ENSEEUG00000013974	RBFOX3	98	80.055	ENSRNOG00000003386	Rbfox3	98	81.967	Rattus_norvegicus
ENSEEUG00000013974	RBFOX3	92	76.590	ENSRBIG00000040449	RBFOX3	75	94.444	Rhinopithecus_bieti
ENSEEUG00000013974	RBFOX3	92	76.590	ENSRROG00000000766	RBFOX3	86	94.444	Rhinopithecus_roxellana
ENSEEUG00000013974	RBFOX3	98	81.918	ENSSBOG00000031591	RBFOX3	98	81.370	Saimiri_boliviensis_boliviensis
ENSEEUG00000013974	RBFOX3	72	88.021	ENSSHAG00000016076	RBFOX3	82	83.099	Sarcophilus_harrisii
ENSEEUG00000013974	RBFOX3	72	93.333	ENSSFOG00015023260	rbfox3a	78	84.507	Scleropages_formosus
ENSEEUG00000013974	RBFOX3	71	67.692	ENSSFOG00015004716	RBFOX3	77	66.197	Scleropages_formosus
ENSEEUG00000013974	RBFOX3	72	81.967	ENSSMAG00000019052	-	84	74.648	Scophthalmus_maximus
ENSEEUG00000013974	RBFOX3	76	88.000	ENSSMAG00000012618	rbfox3b	62	78.824	Scophthalmus_maximus
ENSEEUG00000013974	RBFOX3	72	86.885	ENSSDUG00000023183	rbfox3b	82	76.056	Seriola_dumerili
ENSEEUG00000013974	RBFOX3	72	74.479	ENSSDUG00000015801	-	79	74.479	Seriola_dumerili
ENSEEUG00000013974	RBFOX3	72	86.885	ENSSLDG00000000149	rbfox3b	72	76.056	Seriola_lalandi_dorsalis
ENSEEUG00000013974	RBFOX3	65	86.275	ENSSLDG00000016098	-	68	86.275	Seriola_lalandi_dorsalis
ENSEEUG00000013974	RBFOX3	70	85.246	ENSSPUG00000011733	RBFOX3	83	85.052	Sphenodon_punctatus
ENSEEUG00000013974	RBFOX3	67	82.353	ENSSPAG00000017571	rbfox3b	71	78.431	Stegastes_partitus
ENSEEUG00000013974	RBFOX3	61	88.235	ENSSPAG00000004898	-	70	75.000	Stegastes_partitus
ENSEEUG00000013974	RBFOX3	88	81.212	ENSSSCG00000039498	RBFOX3	100	81.212	Sus_scrofa
ENSEEUG00000013974	RBFOX3	76	76.329	ENSTRUG00000004894	rbfox3b	80	74.372	Takifugu_rubripes
ENSEEUG00000013974	RBFOX3	76	75.238	ENSTNIG00000011278	rbfox3b	76	75.385	Tetraodon_nigroviridis
ENSEEUG00000013974	RBFOX3	96	49.721	ENSTBEG00000004296	-	74	57.401	Tupaia_belangeri
ENSEEUG00000013974	RBFOX3	94	73.789	ENSTTRG00000003676	RBFOX3	97	75.214	Tursiops_truncatus
ENSEEUG00000013974	RBFOX3	70	93.434	ENSUAMG00000004668	RBFOX3	86	93.434	Ursus_americanus
ENSEEUG00000013974	RBFOX3	94	81.766	ENSVVUG00000017864	RBFOX3	86	93.434	Vulpes_vulpes
ENSEEUG00000013974	RBFOX3	100	54.654	ENSXETG00000020236	rbfox3	91	52.970	Xenopus_tropicalis
ENSEEUG00000013974	RBFOX3	72	85.246	ENSXCOG00000018262	rbfox3b	80	76.596	Xiphophorus_couchianus
ENSEEUG00000013974	RBFOX3	76	88.000	ENSXMAG00000012939	rbfox3b	84	78.824	Xiphophorus_maculatus