EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000014031 (Gene tree)
Gene ID: -
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 82559 bases
Position: chrGeneScaffold_3567:177870-260428
Accession: 25734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000012806	MRP-S27	PF10037.9	1.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000014039	PTCD2-201	1161	-	ENSEEUP00000012806	386 (aa)	-	UPI0000F642EC

Gene Model

Click here to download ENSEEUG00000014031's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000014031's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000014031	PTCD2	99	73.177	ENSG00000049883	PTCD2	99	73.177	Homo_sapiens
ENSEEUG00000014031	PTCD2	94	47.123	ENSAPOG00000020682	ptcd2	95	47.123	Acanthochromis_polyacanthus
ENSEEUG00000014031	PTCD2	99	72.727	ENSAMEG00000007194	PTCD2	99	72.727	Ailuropoda_melanoleuca
ENSEEUG00000014031	PTCD2	89	42.571	ENSACIG00000002053	ptcd2	100	42.571	Amphilophus_citrinellus
ENSEEUG00000014031	PTCD2	94	46.448	ENSAOCG00000006616	ptcd2	93	46.448	Amphiprion_ocellaris
ENSEEUG00000014031	PTCD2	94	46.448	ENSAPEG00000022926	ptcd2	93	46.448	Amphiprion_percula
ENSEEUG00000014031	PTCD2	94	57.493	ENSACAG00000009747	PTCD2	92	57.493	Anolis_carolinensis
ENSEEUG00000014031	PTCD2	99	74.219	ENSANAG00000029353	PTCD2	99	74.219	Aotus_nancymaae
ENSEEUG00000014031	PTCD2	94	45.355	ENSACLG00000027742	ptcd2	93	45.355	Astatotilapia_calliptera
ENSEEUG00000014031	PTCD2	85	43.953	ENSAMXG00000029404	ptcd2	91	43.953	Astyanax_mexicanus
ENSEEUG00000014031	PTCD2	99	76.042	ENSBTAG00000014675	PTCD2	100	76.042	Bos_taurus
ENSEEUG00000014031	PTCD2	99	73.698	ENSCJAG00000016364	PTCD2	99	73.698	Callithrix_jacchus
ENSEEUG00000014031	PTCD2	99	70.833	ENSCAFG00000007982	PTCD2	90	70.833	Canis_familiaris
ENSEEUG00000014031	PTCD2	89	73.699	ENSCAFG00020019147	PTCD2	97	73.699	Canis_lupus_dingo
ENSEEUG00000014031	PTCD2	99	76.823	ENSCHIG00000017118	PTCD2	100	76.823	Capra_hircus
ENSEEUG00000014031	PTCD2	99	67.885	ENSCPOG00000040168	PTCD2	100	67.885	Cavia_porcellus
ENSEEUG00000014031	PTCD2	99	72.539	ENSCCAG00000029389	-	99	72.539	Cebus_capucinus
ENSEEUG00000014031	PTCD2	83	69.782	ENSCCAG00000021996	-	98	69.782	Cebus_capucinus
ENSEEUG00000014031	PTCD2	99	72.063	ENSCATG00000019069	PTCD2	100	72.063	Cercocebus_atys
ENSEEUG00000014031	PTCD2	99	68.407	ENSCLAG00000000072	PTCD2	100	68.407	Chinchilla_lanigera
ENSEEUG00000014031	PTCD2	99	72.846	ENSCSAG00000015623	PTCD2	100	72.846	Chlorocebus_sabaeus
ENSEEUG00000014031	PTCD2	89	54.885	ENSCHOG00000010634	PTCD2	100	54.885	Choloepus_hoffmanni
ENSEEUG00000014031	PTCD2	99	52.835	ENSCPBG00000000216	PTCD2	98	52.835	Chrysemys_picta_bellii
ENSEEUG00000014031	PTCD2	99	72.396	ENSCANG00000035636	PTCD2	99	72.396	Colobus_angolensis_palliatus
ENSEEUG00000014031	PTCD2	99	65.885	ENSCGRG00001015289	Ptcd2	84	65.885	Cricetulus_griseus_chok1gshd
ENSEEUG00000014031	PTCD2	99	65.885	ENSCGRG00000006193	Ptcd2	84	65.885	Cricetulus_griseus_crigri
ENSEEUG00000014031	PTCD2	94	44.536	ENSCVAG00000001285	ptcd2	93	44.536	Cyprinodon_variegatus
ENSEEUG00000014031	PTCD2	96	42.781	ENSDARG00000035391	ptcd2	97	42.781	Danio_rerio
ENSEEUG00000014031	PTCD2	99	70.496	ENSDNOG00000008719	PTCD2	100	70.496	Dasypus_novemcinctus
ENSEEUG00000014031	PTCD2	99	69.767	ENSDORG00000004921	Ptcd2	100	69.767	Dipodomys_ordii
ENSEEUG00000014031	PTCD2	99	63.660	ENSETEG00000016542	PTCD2	99	63.660	Echinops_telfairi
ENSEEUG00000014031	PTCD2	99	74.935	ENSEASG00005018038	PTCD2	100	74.935	Equus_asinus_asinus
ENSEEUG00000014031	PTCD2	99	75.325	ENSECAG00000007022	PTCD2	99	75.325	Equus_caballus
ENSEEUG00000014031	PTCD2	90	49.425	ENSELUG00000003584	ptcd2	91	49.425	Esox_lucius
ENSEEUG00000014031	PTCD2	99	69.010	ENSFCAG00000045432	PTCD2	83	69.010	Felis_catus
ENSEEUG00000014031	PTCD2	84	51.988	ENSFALG00000010299	PTCD2	99	51.988	Ficedula_albicollis
ENSEEUG00000014031	PTCD2	99	68.407	ENSFDAG00000018461	PTCD2	100	68.407	Fukomys_damarensis
ENSEEUG00000014031	PTCD2	90	48.718	ENSGMOG00000003637	ptcd2	91	48.718	Gadus_morhua
ENSEEUG00000014031	PTCD2	91	49.292	ENSGALG00000038260	PTCD2	93	49.292	Gallus_gallus
ENSEEUG00000014031	PTCD2	99	54.103	ENSGAGG00000021952	PTCD2	98	54.103	Gopherus_agassizii
ENSEEUG00000014031	PTCD2	99	72.917	ENSGGOG00000010695	PTCD2	99	72.917	Gorilla_gorilla
ENSEEUG00000014031	PTCD2	94	45.082	ENSHBUG00000009191	ptcd2	93	45.082	Haplochromis_burtoni
ENSEEUG00000014031	PTCD2	99	68.930	ENSHGLG00000001234	PTCD2	100	68.930	Heterocephalus_glaber_female
ENSEEUG00000014031	PTCD2	99	69.191	ENSHGLG00100015419	PTCD2	100	69.191	Heterocephalus_glaber_male
ENSEEUG00000014031	PTCD2	90	46.264	ENSHCOG00000001703	ptcd2	90	46.264	Hippocampus_comes
ENSEEUG00000014031	PTCD2	84	45.846	ENSIPUG00000006080	ptcd2	89	46.199	Ictalurus_punctatus
ENSEEUG00000014031	PTCD2	98	70.942	ENSSTOG00000006596	PTCD2	99	70.942	Ictidomys_tridecemlineatus
ENSEEUG00000014031	PTCD2	99	69.452	ENSJJAG00000024388	Ptcd2	100	69.452	Jaculus_jaculus
ENSEEUG00000014031	PTCD2	94	43.251	ENSKMAG00000009329	ptcd2	94	43.251	Kryptolebias_marmoratus
ENSEEUG00000014031	PTCD2	99	44.359	ENSLBEG00000024871	ptcd2	98	44.359	Labrus_bergylta
ENSEEUG00000014031	PTCD2	91	53.390	ENSLOCG00000011122	ptcd2	92	53.390	Lepisosteus_oculatus
ENSEEUG00000014031	PTCD2	81	73.633	ENSLAFG00000004115	PTCD2	100	74.121	Loxodonta_africana
ENSEEUG00000014031	PTCD2	99	71.615	ENSMFAG00000031516	PTCD2	99	71.615	Macaca_fascicularis
ENSEEUG00000014031	PTCD2	99	72.324	ENSMNEG00000007537	PTCD2	100	72.324	Macaca_nemestrina
ENSEEUG00000014031	PTCD2	99	71.615	ENSMLEG00000031093	PTCD2	99	71.615	Mandrillus_leucophaeus
ENSEEUG00000014031	PTCD2	93	47.934	ENSMAMG00000018529	ptcd2	95	47.934	Mastacembelus_armatus
ENSEEUG00000014031	PTCD2	94	45.355	ENSMZEG00005003625	ptcd2	93	45.355	Maylandia_zebra
ENSEEUG00000014031	PTCD2	90	50.432	ENSMGAG00000005033	PTCD2	99	50.432	Meleagris_gallopavo
ENSEEUG00000014031	PTCD2	99	53.525	ENSMAUG00000020253	Ptcd2	100	53.525	Mesocricetus_auratus
ENSEEUG00000014031	PTCD2	99	72.063	ENSMICG00000004535	PTCD2	99	72.063	Microcebus_murinus
ENSEEUG00000014031	PTCD2	99	65.535	ENSMOCG00000019985	Ptcd2	100	65.535	Microtus_ochrogaster
ENSEEUG00000014031	PTCD2	94	58.287	ENSMODG00000001695	PTCD2	92	58.287	Monodelphis_domestica
ENSEEUG00000014031	PTCD2	96	47.326	ENSMALG00000022372	ptcd2	94	47.326	Monopterus_albus
ENSEEUG00000014031	PTCD2	99	65.535	MGP_CAROLIEiJ_G0018829	Ptcd2	100	65.535	Mus_caroli
ENSEEUG00000014031	PTCD2	99	65.535	ENSMUSG00000021650	Ptcd2	100	65.535	Mus_musculus
ENSEEUG00000014031	PTCD2	99	67.363	MGP_PahariEiJ_G0015904	Ptcd2	100	67.363	Mus_pahari
ENSEEUG00000014031	PTCD2	99	66.057	MGP_SPRETEiJ_G0019711	Ptcd2	100	66.057	Mus_spretus
ENSEEUG00000014031	PTCD2	99	74.413	ENSMPUG00000014401	PTCD2	100	74.413	Mustela_putorius_furo
ENSEEUG00000014031	PTCD2	99	73.177	ENSMLUG00000007374	PTCD2	99	73.177	Myotis_lucifugus
ENSEEUG00000014031	PTCD2	99	69.452	ENSNGAG00000005027	Ptcd2	100	69.452	Nannospalax_galili
ENSEEUG00000014031	PTCD2	85	46.224	ENSNBRG00000000092	-	100	46.224	Neolamprologus_brichardi
ENSEEUG00000014031	PTCD2	97	44.828	ENSNBRG00000008174	ptcd2	97	44.828	Neolamprologus_brichardi
ENSEEUG00000014031	PTCD2	99	74.219	ENSNLEG00000004516	PTCD2	99	74.219	Nomascus_leucogenys
ENSEEUG00000014031	PTCD2	81	50.479	ENSMEUG00000014012	-	82	50.479	Notamacropus_eugenii
ENSEEUG00000014031	PTCD2	99	65.013	ENSOPRG00000007290	PTCD2	99	65.013	Ochotona_princeps
ENSEEUG00000014031	PTCD2	99	68.146	ENSODEG00000016417	PTCD2	100	68.146	Octodon_degus
ENSEEUG00000014031	PTCD2	79	47.059	ENSONIG00000011269	ptcd2	89	47.059	Oreochromis_niloticus
ENSEEUG00000014031	PTCD2	94	70.959	ENSOCUG00000007970	PTCD2	100	69.713	Oryctolagus_cuniculus
ENSEEUG00000014031	PTCD2	99	45.596	ENSORLG00000003851	ptcd2	97	45.596	Oryzias_latipes
ENSEEUG00000014031	PTCD2	99	44.819	ENSORLG00020009823	ptcd2	99	44.819	Oryzias_latipes_hni
ENSEEUG00000014031	PTCD2	89	47.110	ENSORLG00015016777	ptcd2	99	47.110	Oryzias_latipes_hsok
ENSEEUG00000014031	PTCD2	93	45.152	ENSOMEG00000012396	ptcd2	87	45.152	Oryzias_melastigma
ENSEEUG00000014031	PTCD2	99	67.708	ENSOGAG00000008390	PTCD2	99	67.708	Otolemur_garnettii
ENSEEUG00000014031	PTCD2	99	76.166	ENSOARG00000005087	PTCD2	99	76.166	Ovis_aries
ENSEEUG00000014031	PTCD2	99	72.917	ENSPPAG00000028480	PTCD2	99	72.917	Pan_paniscus
ENSEEUG00000014031	PTCD2	99	72.396	ENSPTRG00000016968	PTCD2	99	72.396	Pan_troglodytes
ENSEEUG00000014031	PTCD2	89	73.333	ENSPANG00000006611	PTCD2	89	73.333	Papio_anubis
ENSEEUG00000014031	PTCD2	91	46.067	ENSPKIG00000019896	ptcd2	93	46.067	Paramormyrops_kingsleyae
ENSEEUG00000014031	PTCD2	80	58.710	ENSPSIG00000014559	PTCD2	96	58.710	Pelodiscus_sinensis
ENSEEUG00000014031	PTCD2	99	65.974	ENSPEMG00000000884	Ptcd2	100	65.974	Peromyscus_maniculatus_bairdii
ENSEEUG00000014031	PTCD2	99	57.292	ENSPCIG00000029047	PTCD2	100	57.292	Phascolarctos_cinereus
ENSEEUG00000014031	PTCD2	84	44.073	ENSPLAG00000010456	ptcd2	94	43.490	Poecilia_latipinna
ENSEEUG00000014031	PTCD2	92	43.175	ENSPREG00000021797	ptcd2	92	43.175	Poecilia_reticulata
ENSEEUG00000014031	PTCD2	99	64.062	ENSPPYG00000015543	PTCD2	99	64.062	Pongo_abelii
ENSEEUG00000014031	PTCD2	80	60.645	ENSPCAG00000006806	PTCD2	99	60.645	Procavia_capensis
ENSEEUG00000014031	PTCD2	99	72.135	ENSPVAG00000010935	PTCD2	99	72.135	Pteropus_vampyrus
ENSEEUG00000014031	PTCD2	94	45.355	ENSPNYG00000003122	ptcd2	93	45.355	Pundamilia_nyererei
ENSEEUG00000014031	PTCD2	97	46.825	ENSPNAG00000021490	ptcd2	95	47.090	Pygocentrus_nattereri
ENSEEUG00000014031	PTCD2	99	67.624	ENSRNOG00000028403	Ptcd2	100	67.624	Rattus_norvegicus
ENSEEUG00000014031	PTCD2	99	67.188	ENSRBIG00000032929	PTCD2	99	67.188	Rhinopithecus_bieti
ENSEEUG00000014031	PTCD2	99	72.846	ENSRROG00000000080	PTCD2	100	72.846	Rhinopithecus_roxellana
ENSEEUG00000014031	PTCD2	99	71.802	ENSSBOG00000018911	PTCD2	100	71.802	Saimiri_boliviensis_boliviensis
ENSEEUG00000014031	PTCD2	99	57.106	ENSSHAG00000003833	PTCD2	100	57.106	Sarcophilus_harrisii
ENSEEUG00000014031	PTCD2	85	46.809	ENSSFOG00015015415	ptcd2	85	46.809	Scleropages_formosus
ENSEEUG00000014031	PTCD2	90	43.516	ENSSMAG00000010350	ptcd2	90	43.516	Scophthalmus_maximus
ENSEEUG00000014031	PTCD2	94	46.575	ENSSDUG00000008142	ptcd2	91	46.575	Seriola_dumerili
ENSEEUG00000014031	PTCD2	94	46.849	ENSSLDG00000015284	ptcd2	95	46.849	Seriola_lalandi_dorsalis
ENSEEUG00000014031	PTCD2	80	63.871	ENSSARG00000004983	PTCD2	99	63.871	Sorex_araneus
ENSEEUG00000014031	PTCD2	99	51.414	ENSSPUG00000000176	PTCD2	96	51.414	Sphenodon_punctatus
ENSEEUG00000014031	PTCD2	94	47.123	ENSSPAG00000008591	ptcd2	93	47.123	Stegastes_partitus
ENSEEUG00000014031	PTCD2	99	74.611	ENSSSCG00000016975	PTCD2	90	75.000	Sus_scrofa
ENSEEUG00000014031	PTCD2	89	51.734	ENSTGUG00000005705	PTCD2	99	51.734	Taeniopygia_guttata
ENSEEUG00000014031	PTCD2	99	68.229	ENSTBEG00000016559	PTCD2	99	68.229	Tupaia_belangeri
ENSEEUG00000014031	PTCD2	99	75.844	ENSTTRG00000011851	PTCD2	99	75.844	Tursiops_truncatus
ENSEEUG00000014031	PTCD2	99	72.917	ENSUAMG00000007583	PTCD2	90	72.917	Ursus_americanus
ENSEEUG00000014031	PTCD2	99	73.107	ENSUMAG00000007666	PTCD2	100	73.107	Ursus_maritimus
ENSEEUG00000014031	PTCD2	99	74.026	ENSVPAG00000009597	PTCD2	99	74.026	Vicugna_pacos
ENSEEUG00000014031	PTCD2	99	70.757	ENSVVUG00000007299	-	100	70.757	Vulpes_vulpes
ENSEEUG00000014031	PTCD2	92	52.486	ENSXETG00000031652	PTCD2	94	52.486	Xenopus_tropicalis
ENSEEUG00000014031	PTCD2	84	44.512	ENSXMAG00000005940	ptcd2	85	43.767	Xiphophorus_maculatus