EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000014036 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD4
Alias: FLJ14494
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 10313 bases
Position: chrGeneScaffold_6377:35021-45333
Accession: 25898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000012790	PseudoU_synth_2	PF00849.22	5.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000014022	RPUSD4-201	1128	-	ENSEEUP00000012790	375 (aa)	-	UPI0000F623FE

Gene Model

Click here to download ENSEEUG00000014036's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000014036's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000014036	RPUSD4	80	80.978	ENSG00000165526	RPUSD4	80	80.978	Homo_sapiens
ENSEEUG00000014036	RPUSD4	68	56.906	ENSAPOG00000011024	rpusd4	64	56.906	Acanthochromis_polyacanthus
ENSEEUG00000014036	RPUSD4	60	72.727	ENSAMEG00000005953	-	93	72.727	Ailuropoda_melanoleuca
ENSEEUG00000014036	RPUSD4	81	80.108	ENSAMEG00000000127	-	81	80.108	Ailuropoda_melanoleuca
ENSEEUG00000014036	RPUSD4	68	56.180	ENSACIG00000003533	rpusd4	77	56.180	Amphilophus_citrinellus
ENSEEUG00000014036	RPUSD4	68	55.801	ENSAOCG00000015409	rpusd4	64	55.801	Amphiprion_ocellaris
ENSEEUG00000014036	RPUSD4	68	56.354	ENSAPEG00000018935	rpusd4	64	56.354	Amphiprion_percula
ENSEEUG00000014036	RPUSD4	68	55.128	ENSATEG00000008059	rpusd4	63	55.128	Anabas_testudineus
ENSEEUG00000014036	RPUSD4	55	68.571	ENSAPLG00000013250	RPUSD4	76	58.824	Anas_platyrhynchos
ENSEEUG00000014036	RPUSD4	69	59.890	ENSACAG00000000189	RPUSD4	72	59.890	Anolis_carolinensis
ENSEEUG00000014036	RPUSD4	80	76.630	ENSANAG00000024050	RPUSD4	81	76.630	Aotus_nancymaae
ENSEEUG00000014036	RPUSD4	70	57.459	ENSACLG00000020996	rpusd4	68	57.459	Astatotilapia_calliptera
ENSEEUG00000014036	RPUSD4	72	56.180	ENSAMXG00000031479	rpusd4	75	56.180	Astyanax_mexicanus
ENSEEUG00000014036	RPUSD4	82	77.368	ENSBTAG00000020900	RPUSD4	82	77.368	Bos_taurus
ENSEEUG00000014036	RPUSD4	80	76.630	ENSCJAG00000042850	RPUSD4	76	76.630	Callithrix_jacchus
ENSEEUG00000014036	RPUSD4	81	81.720	ENSCAFG00000010488	RPUSD4	81	81.720	Canis_familiaris
ENSEEUG00000014036	RPUSD4	81	81.720	ENSCAFG00020010621	RPUSD4	81	81.720	Canis_lupus_dingo
ENSEEUG00000014036	RPUSD4	82	77.895	ENSCHIG00000009975	RPUSD4	82	77.895	Capra_hircus
ENSEEUG00000014036	RPUSD4	82	83.158	ENSTSYG00000008456	RPUSD4	82	83.158	Carlito_syrichta
ENSEEUG00000014036	RPUSD4	50	73.262	ENSCAPG00000006040	RPUSD4	72	73.262	Cavia_aperea
ENSEEUG00000014036	RPUSD4	81	77.540	ENSCPOG00000014971	RPUSD4	81	77.540	Cavia_porcellus
ENSEEUG00000014036	RPUSD4	80	77.174	ENSCCAG00000027838	RPUSD4	81	77.174	Cebus_capucinus
ENSEEUG00000014036	RPUSD4	80	80.978	ENSCATG00000041570	RPUSD4	80	80.978	Cercocebus_atys
ENSEEUG00000014036	RPUSD4	76	81.818	ENSCLAG00000016553	RPUSD4	76	81.818	Chinchilla_lanigera
ENSEEUG00000014036	RPUSD4	80	80.978	ENSCSAG00000002274	RPUSD4	80	80.978	Chlorocebus_sabaeus
ENSEEUG00000014036	RPUSD4	57	76.923	ENSCPBG00000011175	RPUSD4	74	76.923	Chrysemys_picta_bellii
ENSEEUG00000014036	RPUSD4	80	79.891	ENSCANG00000039684	RPUSD4	80	79.891	Colobus_angolensis_palliatus
ENSEEUG00000014036	RPUSD4	80	80.435	ENSCGRG00001024141	Rpusd4	80	80.435	Cricetulus_griseus_chok1gshd
ENSEEUG00000014036	RPUSD4	80	80.435	ENSCGRG00000014415	Rpusd4	80	80.435	Cricetulus_griseus_crigri
ENSEEUG00000014036	RPUSD4	70	56.906	ENSCVAG00000000392	rpusd4	78	56.906	Cyprinodon_variegatus
ENSEEUG00000014036	RPUSD4	68	56.593	ENSCVAG00000008761	rpusd4	66	56.906	Cyprinodon_variegatus
ENSEEUG00000014036	RPUSD4	62	53.333	ENSDARG00000012674	rpusd4	71	53.333	Danio_rerio
ENSEEUG00000014036	RPUSD4	81	80.645	ENSDNOG00000020026	RPUSD4	81	80.645	Dasypus_novemcinctus
ENSEEUG00000014036	RPUSD4	82	80.526	ENSDORG00000016717	Rpusd4	82	80.526	Dipodomys_ordii
ENSEEUG00000014036	RPUSD4	81	81.720	ENSETEG00000013953	RPUSD4	80	81.720	Echinops_telfairi
ENSEEUG00000014036	RPUSD4	81	82.796	ENSEASG00005022982	RPUSD4	81	82.796	Equus_asinus_asinus
ENSEEUG00000014036	RPUSD4	81	82.258	ENSECAG00000000557	RPUSD4	81	82.258	Equus_caballus
ENSEEUG00000014036	RPUSD4	77	59.116	ENSELUG00000008075	rpusd4	78	59.116	Esox_lucius
ENSEEUG00000014036	RPUSD4	81	81.183	ENSFCAG00000029789	RPUSD4	81	81.183	Felis_catus
ENSEEUG00000014036	RPUSD4	69	59.322	ENSFALG00000005171	RPUSD4	77	59.322	Ficedula_albicollis
ENSEEUG00000014036	RPUSD4	82	78.421	ENSFDAG00000014307	RPUSD4	82	78.421	Fukomys_damarensis
ENSEEUG00000014036	RPUSD4	68	54.144	ENSFHEG00000004329	rpusd4	66	54.144	Fundulus_heteroclitus
ENSEEUG00000014036	RPUSD4	67	53.672	ENSGMOG00000017726	rpusd4	76	53.672	Gadus_morhua
ENSEEUG00000014036	RPUSD4	55	74.286	ENSGALG00000024326	RPUSD4	75	58.523	Gallus_gallus
ENSEEUG00000014036	RPUSD4	68	53.591	ENSGAFG00000021559	rpusd4	66	53.591	Gambusia_affinis
ENSEEUG00000014036	RPUSD4	70	55.682	ENSGACG00000001657	rpusd4	79	55.682	Gasterosteus_aculeatus
ENSEEUG00000014036	RPUSD4	76	62.360	ENSGAGG00000000132	RPUSD4	79	62.360	Gopherus_agassizii
ENSEEUG00000014036	RPUSD4	80	80.978	ENSGGOG00000016494	RPUSD4	80	80.978	Gorilla_gorilla
ENSEEUG00000014036	RPUSD4	70	57.143	ENSHBUG00000022838	rpusd4	68	57.143	Haplochromis_burtoni
ENSEEUG00000014036	RPUSD4	82	76.842	ENSHGLG00000002285	RPUSD4	82	76.842	Heterocephalus_glaber_female
ENSEEUG00000014036	RPUSD4	82	76.842	ENSHGLG00100006385	RPUSD4	82	76.842	Heterocephalus_glaber_male
ENSEEUG00000014036	RPUSD4	68	56.831	ENSHCOG00000006612	rpusd4	66	56.831	Hippocampus_comes
ENSEEUG00000014036	RPUSD4	68	57.865	ENSIPUG00000023879	rusd4	67	57.865	Ictalurus_punctatus
ENSEEUG00000014036	RPUSD4	78	82.584	ENSSTOG00000025280	RPUSD4	81	82.584	Ictidomys_tridecemlineatus
ENSEEUG00000014036	RPUSD4	80	82.609	ENSJJAG00000018673	Rpusd4	81	82.609	Jaculus_jaculus
ENSEEUG00000014036	RPUSD4	68	58.564	ENSKMAG00000021805	rpusd4	67	58.564	Kryptolebias_marmoratus
ENSEEUG00000014036	RPUSD4	67	56.180	ENSLBEG00000020394	rpusd4	72	55.866	Labrus_bergylta
ENSEEUG00000014036	RPUSD4	68	64.607	ENSLACG00000011028	RPUSD4	65	64.607	Latimeria_chalumnae
ENSEEUG00000014036	RPUSD4	68	56.627	ENSLOCG00000003124	rpusd4	68	56.627	Lepisosteus_oculatus
ENSEEUG00000014036	RPUSD4	81	78.495	ENSLAFG00000005211	RPUSD4	82	77.368	Loxodonta_africana
ENSEEUG00000014036	RPUSD4	80	80.978	ENSMFAG00000039513	RPUSD4	80	80.978	Macaca_fascicularis
ENSEEUG00000014036	RPUSD4	80	80.978	ENSMMUG00000007933	RPUSD4	80	80.978	Macaca_mulatta
ENSEEUG00000014036	RPUSD4	80	80.435	ENSMNEG00000027414	RPUSD4	80	80.435	Macaca_nemestrina
ENSEEUG00000014036	RPUSD4	80	79.891	ENSMLEG00000042461	RPUSD4	80	79.891	Mandrillus_leucophaeus
ENSEEUG00000014036	RPUSD4	67	53.039	ENSMAMG00000023839	rpusd4	67	53.039	Mastacembelus_armatus
ENSEEUG00000014036	RPUSD4	70	57.459	ENSMZEG00005011999	rpusd4	68	57.459	Maylandia_zebra
ENSEEUG00000014036	RPUSD4	55	72.727	ENSMGAG00000000840	RPUSD4	78	57.386	Meleagris_gallopavo
ENSEEUG00000014036	RPUSD4	80	79.891	ENSMAUG00000010280	Rpusd4	80	79.891	Mesocricetus_auratus
ENSEEUG00000014036	RPUSD4	82	82.632	ENSMICG00000015979	RPUSD4	82	82.632	Microcebus_murinus
ENSEEUG00000014036	RPUSD4	80	77.717	ENSMOCG00000000661	Rpusd4	80	77.717	Microtus_ochrogaster
ENSEEUG00000014036	RPUSD4	60	66.667	ENSMMOG00000021731	rpusd4	68	66.667	Mola_mola
ENSEEUG00000014036	RPUSD4	69	75.155	ENSMODG00000004521	RPUSD4	67	75.155	Monodelphis_domestica
ENSEEUG00000014036	RPUSD4	62	64.151	ENSMALG00000005839	rpusd4	75	55.249	Monopterus_albus
ENSEEUG00000014036	RPUSD4	80	79.891	MGP_CAROLIEiJ_G0031954	Rpusd4	80	79.891	Mus_caroli
ENSEEUG00000014036	RPUSD4	80	79.348	ENSMUSG00000032044	Rpusd4	80	79.348	Mus_musculus
ENSEEUG00000014036	RPUSD4	80	82.609	MGP_PahariEiJ_G0014819	Rpusd4	80	82.609	Mus_pahari
ENSEEUG00000014036	RPUSD4	80	80.435	MGP_SPRETEiJ_G0033078	Rpusd4	80	80.435	Mus_spretus
ENSEEUG00000014036	RPUSD4	81	78.723	ENSMPUG00000006608	RPUSD4	81	78.723	Mustela_putorius_furo
ENSEEUG00000014036	RPUSD4	71	82.022	ENSMLUG00000017328	-	78	82.022	Myotis_lucifugus
ENSEEUG00000014036	RPUSD4	80	83.696	ENSNGAG00000020847	Rpusd4	80	83.696	Nannospalax_galili
ENSEEUG00000014036	RPUSD4	67	58.011	ENSNBRG00000005207	rpusd4	74	58.011	Neolamprologus_brichardi
ENSEEUG00000014036	RPUSD4	82	79.474	ENSNLEG00000007465	RPUSD4	82	79.474	Nomascus_leucogenys
ENSEEUG00000014036	RPUSD4	80	69.022	ENSMEUG00000004370	RPUSD4	81	69.022	Notamacropus_eugenii
ENSEEUG00000014036	RPUSD4	81	78.610	ENSODEG00000004577	RPUSD4	81	78.610	Octodon_degus
ENSEEUG00000014036	RPUSD4	71	57.143	ENSONIG00000018879	rpusd4	73	57.143	Oreochromis_niloticus
ENSEEUG00000014036	RPUSD4	59	76.000	ENSOANG00000007247	RPUSD4	73	76.000	Ornithorhynchus_anatinus
ENSEEUG00000014036	RPUSD4	79	87.293	ENSOCUG00000017039	RPUSD4	79	87.293	Oryctolagus_cuniculus
ENSEEUG00000014036	RPUSD4	58	63.043	ENSORLG00000002750	rpusd4	61	63.043	Oryzias_latipes
ENSEEUG00000014036	RPUSD4	58	60.870	ENSORLG00020002044	rpusd4	55	60.870	Oryzias_latipes_hni
ENSEEUG00000014036	RPUSD4	66	55.172	ENSORLG00015020034	rpusd4	64	53.846	Oryzias_latipes_hsok
ENSEEUG00000014036	RPUSD4	66	56.322	ENSOMEG00000004861	rpusd4	62	56.322	Oryzias_melastigma
ENSEEUG00000014036	RPUSD4	82	81.053	ENSOGAG00000008922	RPUSD4	82	81.053	Otolemur_garnettii
ENSEEUG00000014036	RPUSD4	79	78.421	ENSOARG00000012238	RPUSD4	79	78.421	Ovis_aries
ENSEEUG00000014036	RPUSD4	80	80.978	ENSPPAG00000042883	RPUSD4	75	80.978	Pan_paniscus
ENSEEUG00000014036	RPUSD4	81	81.183	ENSPPRG00000003081	RPUSD4	81	81.183	Panthera_pardus
ENSEEUG00000014036	RPUSD4	81	81.183	ENSPTIG00000012059	RPUSD4	81	81.183	Panthera_tigris_altaica
ENSEEUG00000014036	RPUSD4	80	80.978	ENSPTRG00000004454	RPUSD4	80	80.978	Pan_troglodytes
ENSEEUG00000014036	RPUSD4	80	80.435	ENSPANG00000015040	RPUSD4	80	80.435	Papio_anubis
ENSEEUG00000014036	RPUSD4	76	55.618	ENSPKIG00000023986	rpusd4	74	55.618	Paramormyrops_kingsleyae
ENSEEUG00000014036	RPUSD4	61	70.370	ENSPSIG00000014268	RPUSD4	74	70.370	Pelodiscus_sinensis
ENSEEUG00000014036	RPUSD4	66	55.172	ENSPMGG00000002806	rpusd4	71	55.172	Periophthalmus_magnuspinnatus
ENSEEUG00000014036	RPUSD4	80	68.644	ENSPEMG00000000278	Rpusd4	79	68.644	Peromyscus_maniculatus_bairdii
ENSEEUG00000014036	RPUSD4	63	47.458	ENSPMAG00000008183	rpusd4	73	47.458	Petromyzon_marinus
ENSEEUG00000014036	RPUSD4	78	72.472	ENSPCIG00000010212	RPUSD4	81	72.472	Phascolarctos_cinereus
ENSEEUG00000014036	RPUSD4	68	55.191	ENSPFOG00000019030	rpusd4	68	55.191	Poecilia_formosa
ENSEEUG00000014036	RPUSD4	68	55.801	ENSPLAG00000016848	rpusd4	66	55.801	Poecilia_latipinna
ENSEEUG00000014036	RPUSD4	68	55.249	ENSPMEG00000017534	rpusd4	66	55.249	Poecilia_mexicana
ENSEEUG00000014036	RPUSD4	66	57.407	ENSPREG00000005689	rpusd4	65	57.407	Poecilia_reticulata
ENSEEUG00000014036	RPUSD4	80	80.978	ENSPPYG00000004043	RPUSD4	80	80.978	Pongo_abelii
ENSEEUG00000014036	RPUSD4	80	77.717	ENSPCAG00000000753	RPUSD4	81	77.717	Procavia_capensis
ENSEEUG00000014036	RPUSD4	80	84.239	ENSPCOG00000020694	RPUSD4	88	84.239	Propithecus_coquereli
ENSEEUG00000014036	RPUSD4	81	82.258	ENSPVAG00000000988	RPUSD4	81	82.258	Pteropus_vampyrus
ENSEEUG00000014036	RPUSD4	70	55.495	ENSPNYG00000009652	rpusd4	68	55.495	Pundamilia_nyererei
ENSEEUG00000014036	RPUSD4	69	56.471	ENSPNAG00000012264	rpusd4	69	56.471	Pygocentrus_nattereri
ENSEEUG00000014036	RPUSD4	80	79.348	ENSRNOG00000011567	Rpusd4	80	79.348	Rattus_norvegicus
ENSEEUG00000014036	RPUSD4	78	82.857	ENSRBIG00000034842	RPUSD4	80	80.435	Rhinopithecus_bieti
ENSEEUG00000014036	RPUSD4	78	82.857	ENSRROG00000039753	RPUSD4	80	80.435	Rhinopithecus_roxellana
ENSEEUG00000014036	RPUSD4	80	77.717	ENSSBOG00000030413	RPUSD4	81	77.717	Saimiri_boliviensis_boliviensis
ENSEEUG00000014036	RPUSD4	62	72.727	ENSSHAG00000008304	RPUSD4	77	72.727	Sarcophilus_harrisii
ENSEEUG00000014036	RPUSD4	66	57.386	ENSSFOG00015006203	rpusd4	72	57.386	Scleropages_formosus
ENSEEUG00000014036	RPUSD4	69	56.497	ENSSMAG00000020978	rpusd4	68	57.310	Scophthalmus_maximus
ENSEEUG00000014036	RPUSD4	70	55.429	ENSSDUG00000013399	rpusd4	69	55.429	Seriola_dumerili
ENSEEUG00000014036	RPUSD4	68	55.429	ENSSLDG00000023507	rpusd4	69	55.429	Seriola_lalandi_dorsalis
ENSEEUG00000014036	RPUSD4	72	63.687	ENSSPUG00000001401	RPUSD4	77	63.687	Sphenodon_punctatus
ENSEEUG00000014036	RPUSD4	78	58.564	ENSSPAG00000012163	rpusd4	75	58.564	Stegastes_partitus
ENSEEUG00000014036	RPUSD4	81	83.069	ENSSSCG00000015233	RPUSD4	81	83.069	Sus_scrofa
ENSEEUG00000014036	RPUSD4	61	60.000	ENSTGUG00000000773	RPUSD4	77	60.000	Taeniopygia_guttata
ENSEEUG00000014036	RPUSD4	68	55.556	ENSTRUG00000012283	rpusd4	66	55.556	Takifugu_rubripes
ENSEEUG00000014036	RPUSD4	71	57.222	ENSTNIG00000014676	rpusd4	69	57.222	Tetraodon_nigroviridis
ENSEEUG00000014036	RPUSD4	80	82.065	ENSTTRG00000001555	RPUSD4	80	82.065	Tursiops_truncatus
ENSEEUG00000014036	RPUSD4	81	80.108	ENSUMAG00000002219	RPUSD4	81	80.108	Ursus_maritimus
ENSEEUG00000014036	RPUSD4	52	84.810	ENSVPAG00000001066	RPUSD4	74	84.810	Vicugna_pacos
ENSEEUG00000014036	RPUSD4	81	81.183	ENSVVUG00000020101	RPUSD4	81	81.183	Vulpes_vulpes
ENSEEUG00000014036	RPUSD4	68	54.696	ENSXCOG00000004676	rpusd4	69	54.696	Xiphophorus_couchianus
ENSEEUG00000014036	RPUSD4	68	54.696	ENSXMAG00000023351	rpusd4	66	54.696	Xiphophorus_maculatus