EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000014328 (Gene tree)
Gene ID: -
Gene Symbol: PRPF38B
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 8648 bases
Position: chrscaffold_339382:132-8779
Accession: 25512
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000013075	PRP38	PF03371.15	1.9e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000014331	PRPF38B-201	1626	-	ENSEEUP00000013075	541 (aa)	-	UPI0000F61ADB

Gene Model

Click here to download ENSEEUG00000014328's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000014328's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000014328	PRPF38B	100	92.139	ENSG00000134186	PRPF38B	100	95.288	Homo_sapiens
ENSEEUG00000014328	PRPF38B	100	91.408	ENSANAG00000028333	PRPF38B	100	95.288	Aotus_nancymaae
ENSEEUG00000014328	PRPF38B	100	88.869	ENSCGRG00001018841	Prpf38b	100	90.146	Cricetulus_griseus_chok1gshd
ENSEEUG00000014328	PRPF38B	80	90.805	ENSDORG00000025236	-	100	91.954	Dipodomys_ordii
ENSEEUG00000014328	PRPF38B	100	90.311	ENSFDAG00000021009	PRPF38B	100	91.590	Fukomys_damarensis
ENSEEUG00000014328	PRPF38B	100	92.139	ENSGGOG00000011288	PRPF38B	100	95.288	Gorilla_gorilla
ENSEEUG00000014328	PRPF38B	91	85.542	ENSMGAG00000006188	PRPF38B	100	87.550	Meleagris_gallopavo
ENSEEUG00000014328	PRPF38B	100	89.194	ENSMAUG00000019131	Prpf38b	100	89.744	Mesocricetus_auratus
ENSEEUG00000014328	PRPF38B	100	89.927	MGP_CAROLIEiJ_G0025542	Prpf38b	99	92.473	Mus_caroli
ENSEEUG00000014328	PRPF38B	100	89.744	ENSMUSG00000027881	Prpf38b	99	94.624	Mus_musculus
ENSEEUG00000014328	PRPF38B	100	90.659	MGP_PahariEiJ_G0026988	Prpf38b	99	94.624	Mus_pahari
ENSEEUG00000014328	PRPF38B	100	90.293	MGP_SPRETEiJ_G0026492	Prpf38b	100	94.624	Mus_spretus
ENSEEUG00000014328	PRPF38B	100	86.837	ENSNLEG00000030268	-	100	85.740	Nomascus_leucogenys
ENSEEUG00000014328	PRPF38B	100	91.590	ENSNLEG00000001645	-	100	95.288	Nomascus_leucogenys
ENSEEUG00000014328	PRPF38B	100	92.139	ENSPPAG00000001260	PRPF38B	100	95.288	Pan_paniscus
ENSEEUG00000014328	PRPF38B	100	91.985	ENSPPRG00000002116	PRPF38B	100	94.353	Panthera_pardus
ENSEEUG00000014328	PRPF38B	100	92.139	ENSPTRG00000001032	PRPF38B	100	95.288	Pan_troglodytes
ENSEEUG00000014328	PRPF38B	100	92.505	ENSPANG00000007560	PRPF38B	100	95.288	Papio_anubis
ENSEEUG00000014328	PRPF38B	60	92.447	ENSPCIG00000024841	PRPF38B	100	89.781	Phascolarctos_cinereus
ENSEEUG00000014328	PRPF38B	100	91.606	ENSPVAG00000011929	-	100	93.796	Pteropus_vampyrus
ENSEEUG00000014328	PRPF38B	100	91.486	ENSSARG00000012818	-	100	92.182	Sorex_araneus
ENSEEUG00000014328	PRPF38B	85	82.128	ENSTGUG00000004594	-	100	81.075	Taeniopygia_guttata
ENSEEUG00000014328	PRPF38B	100	92.350	ENSUAMG00000023817	PRPF38B	100	94.353	Ursus_americanus