EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000014737 (Gene tree)
Gene ID: -
Gene Symbol: SND1
Alias: TDRD11|p100
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 525129 bases
Position: chrGeneScaffold_8364:1167-526295
Accession: 30646
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000013472	TUDOR	PF00567.24	2.1e-29	1	1
ENSEEUP00000013472	SNase	PF00565.17	4.3e-47	1	3
ENSEEUP00000013472	SNase	PF00565.17	4.3e-47	2	3
ENSEEUP00000013472	SNase	PF00565.17	4.3e-47	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000014765	SND1-201	2733	-	ENSEEUP00000013472	910 (aa)	-	UPI00014F7A45

Gene Model

Click here to download ENSEEUG00000014737's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000014737's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000014737	SND1	100	86.593	ENSG00000197157	SND1	100	97.887	Homo_sapiens
ENSEEUG00000014737	SND1	100	74.452	ENSAPOG00000017599	snd1	100	74.452	Acanthochromis_polyacanthus
ENSEEUG00000014737	SND1	100	86.623	ENSAMEG00000004664	SND1	94	86.623	Ailuropoda_melanoleuca
ENSEEUG00000014737	SND1	98	72.452	ENSACIG00000003551	snd1	100	71.679	Amphilophus_citrinellus
ENSEEUG00000014737	SND1	100	74.232	ENSAOCG00000014166	snd1	100	74.232	Amphiprion_ocellaris
ENSEEUG00000014737	SND1	100	74.232	ENSAPEG00000007067	snd1	100	74.232	Amphiprion_percula
ENSEEUG00000014737	SND1	96	75.858	ENSATEG00000018475	snd1	86	77.040	Anabas_testudineus
ENSEEUG00000014737	SND1	100	86.813	ENSANAG00000034463	SND1	100	86.813	Aotus_nancymaae
ENSEEUG00000014737	SND1	99	73.846	ENSACLG00000022897	snd1	99	74.610	Astatotilapia_calliptera
ENSEEUG00000014737	SND1	100	74.645	ENSAMXG00000016318	snd1	98	75.278	Astyanax_mexicanus
ENSEEUG00000014737	SND1	100	86.703	ENSBTAG00000010692	SND1	100	86.703	Bos_taurus
ENSEEUG00000014737	SND1	85	51.190	WBGene00006626	tsn-1	95	51.190	Caenorhabditis_elegans
ENSEEUG00000014737	SND1	100	86.593	ENSCJAG00000017668	SND1	100	86.593	Callithrix_jacchus
ENSEEUG00000014737	SND1	100	87.253	ENSCAFG00000001700	SND1	100	87.253	Canis_familiaris
ENSEEUG00000014737	SND1	100	87.253	ENSCAFG00020021639	SND1	100	87.253	Canis_lupus_dingo
ENSEEUG00000014737	SND1	100	86.813	ENSCHIG00000023390	SND1	100	86.813	Capra_hircus
ENSEEUG00000014737	SND1	62	97.178	ENSTSYG00000004979	SND1	97	97.178	Carlito_syrichta
ENSEEUG00000014737	SND1	90	84.048	ENSCAPG00000010677	SND1	98	84.111	Cavia_aperea
ENSEEUG00000014737	SND1	100	86.374	ENSCPOG00000006251	SND1	100	86.374	Cavia_porcellus
ENSEEUG00000014737	SND1	100	86.923	ENSCCAG00000036847	SND1	100	86.923	Cebus_capucinus
ENSEEUG00000014737	SND1	100	86.923	ENSCATG00000035214	SND1	100	86.923	Cercocebus_atys
ENSEEUG00000014737	SND1	100	86.374	ENSCLAG00000011796	SND1	99	96.459	Chinchilla_lanigera
ENSEEUG00000014737	SND1	100	86.923	ENSCSAG00000010182	SND1	100	86.923	Chlorocebus_sabaeus
ENSEEUG00000014737	SND1	74	86.275	ENSCHOG00000002218	SND1	86	86.275	Choloepus_hoffmanni
ENSEEUG00000014737	SND1	100	81.538	ENSCPBG00000018094	SND1	98	82.399	Chrysemys_picta_bellii
ENSEEUG00000014737	SND1	98	51.217	ENSCING00000000524	-	99	50.774	Ciona_intestinalis
ENSEEUG00000014737	SND1	99	51.542	ENSCSAVG00000008807	-	99	51.217	Ciona_savignyi
ENSEEUG00000014737	SND1	100	86.923	ENSCANG00000035119	SND1	100	86.923	Colobus_angolensis_palliatus
ENSEEUG00000014737	SND1	99	86.288	ENSCGRG00001022514	Snd1	99	95.953	Cricetulus_griseus_chok1gshd
ENSEEUG00000014737	SND1	97	86.086	ENSCGRG00000012277	Snd1	99	86.086	Cricetulus_griseus_crigri
ENSEEUG00000014737	SND1	99	74.066	ENSCSEG00000008661	snd1	97	77.156	Cynoglossus_semilaevis
ENSEEUG00000014737	SND1	99	74.862	ENSCVAG00000010316	snd1	100	75.057	Cyprinodon_variegatus
ENSEEUG00000014737	SND1	100	75.027	ENSDARG00000006766	snd1	99	84.912	Danio_rerio
ENSEEUG00000014737	SND1	97	84.104	ENSDNOG00000006795	SND1	100	84.104	Dasypus_novemcinctus
ENSEEUG00000014737	SND1	100	87.033	ENSDORG00000000336	Snd1	100	87.033	Dipodomys_ordii
ENSEEUG00000014737	SND1	91	52.833	FBgn0035121	Tudor-SN	98	52.833	Drosophila_melanogaster
ENSEEUG00000014737	SND1	86	68.462	ENSETEG00000000375	SND1	88	68.462	Echinops_telfairi
ENSEEUG00000014737	SND1	60	67.209	ENSEBUG00000014201	-	84	75.956	Eptatretus_burgeri
ENSEEUG00000014737	SND1	100	85.421	ENSEASG00005008513	SND1	100	85.421	Equus_asinus_asinus
ENSEEUG00000014737	SND1	100	86.813	ENSECAG00000011451	SND1	100	86.813	Equus_caballus
ENSEEUG00000014737	SND1	99	73.575	ENSELUG00000001805	snd1	95	74.247	Esox_lucius
ENSEEUG00000014737	SND1	100	86.923	ENSFCAG00000008289	SND1	100	86.923	Felis_catus
ENSEEUG00000014737	SND1	100	86.813	ENSFDAG00000015881	SND1	100	86.813	Fukomys_damarensis
ENSEEUG00000014737	SND1	99	72.708	ENSFHEG00000004093	snd1	97	77.066	Fundulus_heteroclitus
ENSEEUG00000014737	SND1	64	60.699	ENSGMOG00000018932	snd1	64	62.150	Gadus_morhua
ENSEEUG00000014737	SND1	100	74.671	ENSGAFG00000008421	snd1	99	75.417	Gambusia_affinis
ENSEEUG00000014737	SND1	100	45.277	ENSGACG00000019793	snd1	100	45.277	Gasterosteus_aculeatus
ENSEEUG00000014737	SND1	100	86.813	ENSGGOG00000009614	SND1	100	86.813	Gorilla_gorilla
ENSEEUG00000014737	SND1	99	74.229	ENSHBUG00000019135	snd1	99	74.610	Haplochromis_burtoni
ENSEEUG00000014737	SND1	100	86.593	ENSHGLG00000003618	SND1	98	96.627	Heterocephalus_glaber_female
ENSEEUG00000014737	SND1	99	86.188	ENSHGLG00100012449	SND1	99	86.511	Heterocephalus_glaber_male
ENSEEUG00000014737	SND1	100	73.794	ENSHCOG00000005266	snd1	98	74.832	Hippocampus_comes
ENSEEUG00000014737	SND1	100	74.289	ENSIPUG00000013279	snd1	100	74.289	Ictalurus_punctatus
ENSEEUG00000014737	SND1	100	87.033	ENSSTOG00000002140	SND1	100	87.033	Ictidomys_tridecemlineatus
ENSEEUG00000014737	SND1	100	86.813	ENSJJAG00000009561	Snd1	100	86.813	Jaculus_jaculus
ENSEEUG00000014737	SND1	100	74.342	ENSKMAG00000016997	snd1	98	75.168	Kryptolebias_marmoratus
ENSEEUG00000014737	SND1	93	83.697	ENSLBEG00000013563	snd1	100	83.697	Labrus_bergylta
ENSEEUG00000014737	SND1	99	75.634	ENSLOCG00000015537	snd1	98	75.634	Lepisosteus_oculatus
ENSEEUG00000014737	SND1	100	86.264	ENSLAFG00000009696	SND1	100	86.264	Loxodonta_africana
ENSEEUG00000014737	SND1	100	86.923	ENSMFAG00000038114	SND1	100	86.923	Macaca_fascicularis
ENSEEUG00000014737	SND1	100	86.923	ENSMMUG00000015432	SND1	97	97.124	Macaca_mulatta
ENSEEUG00000014737	SND1	100	86.923	ENSMNEG00000039808	SND1	97	97.168	Macaca_nemestrina
ENSEEUG00000014737	SND1	100	86.923	ENSMLEG00000029040	SND1	97	97.168	Mandrillus_leucophaeus
ENSEEUG00000014737	SND1	99	74.286	ENSMAMG00000011739	snd1	98	75.223	Mastacembelus_armatus
ENSEEUG00000014737	SND1	99	73.846	ENSMZEG00005005681	snd1	99	74.610	Maylandia_zebra
ENSEEUG00000014737	SND1	100	86.923	ENSMICG00000000097	SND1	100	86.923	Microcebus_murinus
ENSEEUG00000014737	SND1	100	87.033	ENSMOCG00000005040	Snd1	100	87.033	Microtus_ochrogaster
ENSEEUG00000014737	SND1	100	73.904	ENSMMOG00000001795	snd1	100	73.904	Mola_mola
ENSEEUG00000014737	SND1	99	83.835	ENSMODG00000015182	SND1	100	83.956	Monodelphis_domestica
ENSEEUG00000014737	SND1	100	73.904	ENSMALG00000012071	snd1	100	73.904	Monopterus_albus
ENSEEUG00000014737	SND1	100	86.813	MGP_CAROLIEiJ_G0028159	Snd1	99	96.459	Mus_caroli
ENSEEUG00000014737	SND1	98	86.592	ENSMUSG00000001424	Snd1	99	96.121	Mus_musculus
ENSEEUG00000014737	SND1	100	86.923	MGP_PahariEiJ_G0021917	Snd1	100	96.627	Mus_pahari
ENSEEUG00000014737	SND1	100	86.813	MGP_SPRETEiJ_G0029159	Snd1	99	96.459	Mus_spretus
ENSEEUG00000014737	SND1	100	86.593	ENSMPUG00000006545	SND1	100	86.593	Mustela_putorius_furo
ENSEEUG00000014737	SND1	97	85.028	ENSMLUG00000017130	SND1	99	85.028	Myotis_lucifugus
ENSEEUG00000014737	SND1	100	86.593	ENSNGAG00000011186	Snd1	100	86.593	Nannospalax_galili
ENSEEUG00000014737	SND1	99	73.956	ENSNBRG00000006681	snd1	99	74.722	Neolamprologus_brichardi
ENSEEUG00000014737	SND1	100	86.703	ENSNLEG00000012263	SND1	99	96.965	Nomascus_leucogenys
ENSEEUG00000014737	SND1	79	93.571	ENSOPRG00000013405	SND1	81	94.656	Ochotona_princeps
ENSEEUG00000014737	SND1	100	86.703	ENSODEG00000011502	SND1	100	86.703	Octodon_degus
ENSEEUG00000014737	SND1	99	73.956	ENSONIG00000011481	snd1	96	74.722	Oreochromis_niloticus
ENSEEUG00000014737	SND1	91	93.345	ENSOANG00000000817	SND1	99	83.166	Ornithorhynchus_anatinus
ENSEEUG00000014737	SND1	100	85.934	ENSOCUG00000001620	SND1	99	85.953	Oryctolagus_cuniculus
ENSEEUG00000014737	SND1	98	74.637	ENSORLG00000015201	snd1	98	74.637	Oryzias_latipes
ENSEEUG00000014737	SND1	98	74.749	ENSORLG00020013991	snd1	98	74.749	Oryzias_latipes_hni
ENSEEUG00000014737	SND1	98	74.749	ENSORLG00015012436	snd1	98	74.749	Oryzias_latipes_hsok
ENSEEUG00000014737	SND1	100	73.794	ENSOMEG00000006406	snd1	98	74.944	Oryzias_melastigma
ENSEEUG00000014737	SND1	100	86.404	ENSOGAG00000013356	SND1	94	86.404	Otolemur_garnettii
ENSEEUG00000014737	SND1	97	86.441	ENSOARG00000002149	SND1	100	86.441	Ovis_aries
ENSEEUG00000014737	SND1	100	86.703	ENSPPAG00000042947	SND1	100	86.703	Pan_paniscus
ENSEEUG00000014737	SND1	100	86.923	ENSPPRG00000004494	SND1	100	86.923	Panthera_pardus
ENSEEUG00000014737	SND1	100	86.813	ENSPTIG00000014214	SND1	100	86.813	Panthera_tigris_altaica
ENSEEUG00000014737	SND1	100	86.703	ENSPTRG00000023911	SND1	100	86.703	Pan_troglodytes
ENSEEUG00000014737	SND1	97	86.652	ENSPANG00000011997	SND1	99	86.652	Papio_anubis
ENSEEUG00000014737	SND1	99	72.767	ENSPKIG00000023494	snd1	98	73.030	Paramormyrops_kingsleyae
ENSEEUG00000014737	SND1	91	75.630	ENSPMGG00000003629	snd1	99	75.630	Periophthalmus_magnuspinnatus
ENSEEUG00000014737	SND1	100	87.033	ENSPEMG00000010240	Snd1	100	87.033	Peromyscus_maniculatus_bairdii
ENSEEUG00000014737	SND1	97	66.780	ENSPMAG00000007915	-	99	66.554	Petromyzon_marinus
ENSEEUG00000014737	SND1	99	84.392	ENSPCIG00000011561	SND1	100	84.505	Phascolarctos_cinereus
ENSEEUG00000014737	SND1	100	74.123	ENSPFOG00000001557	snd1	99	74.861	Poecilia_formosa
ENSEEUG00000014737	SND1	100	74.232	ENSPLAG00000018459	snd1	96	74.972	Poecilia_latipinna
ENSEEUG00000014737	SND1	100	74.561	ENSPMEG00000006803	snd1	99	75.306	Poecilia_mexicana
ENSEEUG00000014737	SND1	100	74.452	ENSPREG00000002189	snd1	99	75.195	Poecilia_reticulata
ENSEEUG00000014737	SND1	89	88.462	ENSPPYG00000017972	SND1	96	88.462	Pongo_abelii
ENSEEUG00000014737	SND1	100	75.165	ENSPCAG00000011305	SND1	100	75.165	Procavia_capensis
ENSEEUG00000014737	SND1	100	86.703	ENSPCOG00000026791	SND1	93	96.147	Propithecus_coquereli
ENSEEUG00000014737	SND1	99	84.950	ENSPVAG00000013945	SND1	100	85.055	Pteropus_vampyrus
ENSEEUG00000014737	SND1	99	73.846	ENSPNYG00000000932	snd1	99	74.610	Pundamilia_nyererei
ENSEEUG00000014737	SND1	100	74.508	ENSPNAG00000001206	snd1	98	75.222	Pygocentrus_nattereri
ENSEEUG00000014737	SND1	98	87.151	ENSRNOG00000031173	Snd1	99	87.179	Rattus_norvegicus
ENSEEUG00000014737	SND1	62	96.958	ENSRBIG00000027782	-	93	96.958	Rhinopithecus_bieti
ENSEEUG00000014737	SND1	100	86.923	ENSRROG00000033020	SND1	100	86.923	Rhinopithecus_roxellana
ENSEEUG00000014737	SND1	100	86.813	ENSSBOG00000032461	SND1	93	97.002	Saimiri_boliviensis_boliviensis
ENSEEUG00000014737	SND1	98	80.856	ENSSHAG00000015359	SND1	100	80.856	Sarcophilus_harrisii
ENSEEUG00000014737	SND1	100	73.449	ENSSFOG00015001103	snd1	98	74.473	Scleropages_formosus
ENSEEUG00000014737	SND1	98	73.826	ENSSMAG00000001932	snd1	93	73.608	Scophthalmus_maximus
ENSEEUG00000014737	SND1	100	73.904	ENSSDUG00000002699	snd1	94	73.904	Seriola_dumerili
ENSEEUG00000014737	SND1	100	66.886	ENSSLDG00000001950	snd1	100	66.886	Seriola_lalandi_dorsalis
ENSEEUG00000014737	SND1	86	95.283	ENSSARG00000004877	SND1	92	95.283	Sorex_araneus
ENSEEUG00000014737	SND1	62	85.739	ENSSPUG00000017586	SND1	96	85.739	Sphenodon_punctatus
ENSEEUG00000014737	SND1	65	83.277	ENSSPAG00000021398	snd1	96	85.243	Stegastes_partitus
ENSEEUG00000014737	SND1	100	86.484	ENSSSCG00000016590	SND1	100	86.484	Sus_scrofa
ENSEEUG00000014737	SND1	99	81.949	ENSTRUG00000014067	snd1	100	73.136	Takifugu_rubripes
ENSEEUG00000014737	SND1	99	74.119	ENSTNIG00000011019	snd1	98	84.202	Tetraodon_nigroviridis
ENSEEUG00000014737	SND1	93	83.491	ENSTBEG00000003999	SND1	100	83.491	Tupaia_belangeri
ENSEEUG00000014737	SND1	100	82.527	ENSTTRG00000006059	SND1	100	82.527	Tursiops_truncatus
ENSEEUG00000014737	SND1	60	87.080	ENSUAMG00000002820	-	90	87.532	Ursus_americanus
ENSEEUG00000014737	SND1	72	98.086	ENSUAMG00000005604	-	85	98.086	Ursus_americanus
ENSEEUG00000014737	SND1	100	86.813	ENSUMAG00000005960	SND1	100	86.813	Ursus_maritimus
ENSEEUG00000014737	SND1	69	88.525	ENSVPAG00000008302	SND1	70	88.525	Vicugna_pacos
ENSEEUG00000014737	SND1	100	87.033	ENSVVUG00000007226	SND1	100	87.033	Vulpes_vulpes
ENSEEUG00000014737	SND1	93	79.059	ENSXETG00000023043	snd1	98	77.804	Xenopus_tropicalis
ENSEEUG00000014737	SND1	91	74.550	ENSXCOG00000013629	snd1	98	74.550	Xiphophorus_couchianus
ENSEEUG00000014737	SND1	100	74.671	ENSXMAG00000011469	snd1	99	75.417	Xiphophorus_maculatus