EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000014861 (Gene tree)
Gene ID: -
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 69934 bases
Position: chrGeneScaffold_3952:16551-86484
Accession: 29434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000013579	zf-CCCH	PF00642.24	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000014879	RC3H1-201	3234	-	ENSEEUP00000013579	1078 (aa)	-	UPI0000F63D26

Gene Model

Click here to download ENSEEUG00000014861's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000014861's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000014861	RC3H1	93	83.302	ENSG00000135870	RC3H1	83	97.059	Homo_sapiens
ENSEEUG00000014861	RC3H1	93	83.117	ENSAMEG00000015657	RC3H1	83	96.639	Ailuropoda_melanoleuca
ENSEEUG00000014861	RC3H1	88	80.812	ENSAPLG00000005341	RC3H1	84	80.812	Anas_platyrhynchos
ENSEEUG00000014861	RC3H1	93	80.258	ENSACAG00000015271	RC3H1	88	80.258	Anolis_carolinensis
ENSEEUG00000014861	RC3H1	93	83.673	ENSANAG00000036716	RC3H1	89	83.673	Aotus_nancymaae
ENSEEUG00000014861	RC3H1	93	82.375	ENSBTAG00000052708	RC3H1	83	94.958	Bos_taurus
ENSEEUG00000014861	RC3H1	93	83.488	ENSCJAG00000009106	RC3H1	89	83.488	Callithrix_jacchus
ENSEEUG00000014861	RC3H1	93	82.931	ENSCAFG00000014434	RC3H1	83	96.218	Canis_familiaris
ENSEEUG00000014861	RC3H1	93	82.931	ENSCAFG00020017112	RC3H1	99	80.449	Canis_lupus_dingo
ENSEEUG00000014861	RC3H1	93	82.560	ENSCHIG00000002873	RC3H1	89	82.560	Capra_hircus
ENSEEUG00000014861	RC3H1	93	82.963	ENSTSYG00000003913	RC3H1	89	82.963	Carlito_syrichta
ENSEEUG00000014861	RC3H1	93	82.004	ENSCPOG00000004349	RC3H1	89	82.004	Cavia_porcellus
ENSEEUG00000014861	RC3H1	93	83.673	ENSCCAG00000025652	RC3H1	91	83.673	Cebus_capucinus
ENSEEUG00000014861	RC3H1	93	83.302	ENSCATG00000033497	RC3H1	83	97.059	Cercocebus_atys
ENSEEUG00000014861	RC3H1	93	82.746	ENSCLAG00000011267	RC3H1	83	95.798	Chinchilla_lanigera
ENSEEUG00000014861	RC3H1	93	83.302	ENSCSAG00000011823	RC3H1	79	83.302	Chlorocebus_sabaeus
ENSEEUG00000014861	RC3H1	93	81.818	ENSCPBG00000014670	RC3H1	89	81.818	Chrysemys_picta_bellii
ENSEEUG00000014861	RC3H1	93	83.117	ENSCANG00000032120	RC3H1	83	97.059	Colobus_angolensis_palliatus
ENSEEUG00000014861	RC3H1	93	82.375	ENSCGRG00001020812	Rc3h1	83	95.378	Cricetulus_griseus_chok1gshd
ENSEEUG00000014861	RC3H1	93	82.375	ENSCGRG00000011952	Rc3h1	83	95.378	Cricetulus_griseus_crigri
ENSEEUG00000014861	RC3H1	51	94.186	ENSDNOG00000011494	RC3H1	88	94.186	Dasypus_novemcinctus
ENSEEUG00000014861	RC3H1	93	81.633	ENSDORG00000004855	Rc3h1	89	81.633	Dipodomys_ordii
ENSEEUG00000014861	RC3H1	74	92.105	ENSETEG00000012064	RC3H1	69	95.798	Echinops_telfairi
ENSEEUG00000014861	RC3H1	93	82.931	ENSEASG00005017000	RC3H1	83	96.218	Equus_asinus_asinus
ENSEEUG00000014861	RC3H1	93	82.746	ENSECAG00000021208	RC3H1	83	96.218	Equus_caballus
ENSEEUG00000014861	RC3H1	93	83.117	ENSFCAG00000014924	RC3H1	83	96.639	Felis_catus
ENSEEUG00000014861	RC3H1	93	81.076	ENSFALG00000002947	RC3H1	89	81.076	Ficedula_albicollis
ENSEEUG00000014861	RC3H1	93	82.746	ENSFDAG00000013303	RC3H1	89	82.746	Fukomys_damarensis
ENSEEUG00000014861	RC3H1	88	81.076	ENSGALG00000004587	RC3H1	89	81.076	Gallus_gallus
ENSEEUG00000014861	RC3H1	93	80.891	ENSGAGG00000018194	RC3H1	89	80.891	Gopherus_agassizii
ENSEEUG00000014861	RC3H1	82	88.479	ENSGGOG00000005735	RC3H1	81	88.479	Gorilla_gorilla
ENSEEUG00000014861	RC3H1	81	87.081	ENSHGLG00000004183	-	87	87.081	Heterocephalus_glaber_female
ENSEEUG00000014861	RC3H1	93	82.560	ENSHGLG00100008577	RC3H1	83	95.378	Heterocephalus_glaber_male
ENSEEUG00000014861	RC3H1	88	85.274	ENSSTOG00000016033	RC3H1	83	96.218	Ictidomys_tridecemlineatus
ENSEEUG00000014861	RC3H1	93	83.117	ENSJJAG00000018915	Rc3h1	89	83.117	Jaculus_jaculus
ENSEEUG00000014861	RC3H1	93	76.580	ENSLACG00000016186	RC3H1	94	76.580	Latimeria_chalumnae
ENSEEUG00000014861	RC3H1	93	83.302	ENSLAFG00000004367	RC3H1	92	83.302	Loxodonta_africana
ENSEEUG00000014861	RC3H1	93	83.302	ENSMFAG00000033725	RC3H1	83	97.059	Macaca_fascicularis
ENSEEUG00000014861	RC3H1	93	83.302	ENSMMUG00000000630	RC3H1	83	97.059	Macaca_mulatta
ENSEEUG00000014861	RC3H1	93	83.302	ENSMNEG00000035968	RC3H1	83	97.059	Macaca_nemestrina
ENSEEUG00000014861	RC3H1	93	83.302	ENSMLEG00000037455	RC3H1	83	97.059	Mandrillus_leucophaeus
ENSEEUG00000014861	RC3H1	85	82.375	ENSMAUG00000020864	Rc3h1	86	82.375	Mesocricetus_auratus
ENSEEUG00000014861	RC3H1	93	83.302	ENSMICG00000003000	RC3H1	83	97.059	Microcebus_murinus
ENSEEUG00000014861	RC3H1	86	78.788	ENSMOCG00000016587	Rc3h1	80	94.958	Microtus_ochrogaster
ENSEEUG00000014861	RC3H1	93	82.375	ENSMODG00000004289	RC3H1	83	94.958	Monodelphis_domestica
ENSEEUG00000014861	RC3H1	93	81.818	MGP_CAROLIEiJ_G0014756	Rc3h1	89	81.818	Mus_caroli
ENSEEUG00000014861	RC3H1	93	81.818	ENSMUSG00000040423	Rc3h1	89	81.818	Mus_musculus
ENSEEUG00000014861	RC3H1	93	82.004	MGP_PahariEiJ_G0027992	Rc3h1	89	82.004	Mus_pahari
ENSEEUG00000014861	RC3H1	93	81.818	MGP_SPRETEiJ_G0015563	Rc3h1	89	81.818	Mus_spretus
ENSEEUG00000014861	RC3H1	89	86.986	ENSMPUG00000004747	RC3H1	89	82.746	Mustela_putorius_furo
ENSEEUG00000014861	RC3H1	93	81.818	ENSMLUG00000011127	RC3H1	90	81.818	Myotis_lucifugus
ENSEEUG00000014861	RC3H1	93	82.746	ENSNGAG00000011135	Rc3h1	89	82.746	Nannospalax_galili
ENSEEUG00000014861	RC3H1	93	83.302	ENSNLEG00000015327	RC3H1	83	97.059	Nomascus_leucogenys
ENSEEUG00000014861	RC3H1	88	79.032	ENSOPRG00000013068	RC3H1	83	93.277	Ochotona_princeps
ENSEEUG00000014861	RC3H1	93	82.560	ENSODEG00000014185	RC3H1	83	95.378	Octodon_degus
ENSEEUG00000014861	RC3H1	93	81.633	ENSOANG00000000924	RC3H1	83	94.118	Ornithorhynchus_anatinus
ENSEEUG00000014861	RC3H1	93	81.262	ENSOCUG00000004930	RC3H1	83	93.162	Oryctolagus_cuniculus
ENSEEUG00000014861	RC3H1	93	78.344	ENSOGAG00000004044	RC3H1	83	93.162	Otolemur_garnettii
ENSEEUG00000014861	RC3H1	93	82.560	ENSOARG00000013011	RC3H1	83	95.378	Ovis_aries
ENSEEUG00000014861	RC3H1	93	83.302	ENSPPAG00000039253	RC3H1	83	97.059	Pan_paniscus
ENSEEUG00000014861	RC3H1	93	83.117	ENSPPRG00000009007	RC3H1	89	83.117	Panthera_pardus
ENSEEUG00000014861	RC3H1	88	87.329	ENSPTIG00000015326	RC3H1	83	96.639	Panthera_tigris_altaica
ENSEEUG00000014861	RC3H1	93	83.302	ENSPTRG00000001702	RC3H1	83	97.059	Pan_troglodytes
ENSEEUG00000014861	RC3H1	93	83.302	ENSPANG00000008886	RC3H1	83	97.059	Papio_anubis
ENSEEUG00000014861	RC3H1	93	81.262	ENSPSIG00000016181	RC3H1	89	81.262	Pelodiscus_sinensis
ENSEEUG00000014861	RC3H1	93	82.375	ENSPEMG00000011966	Rc3h1	89	82.375	Peromyscus_maniculatus_bairdii
ENSEEUG00000014861	RC3H1	62	82.189	ENSPCIG00000002058	RC3H1	80	96.552	Phascolarctos_cinereus
ENSEEUG00000014861	RC3H1	92	83.302	ENSPPYG00000000490	RC3H1	92	83.302	Pongo_abelii
ENSEEUG00000014861	RC3H1	68	100.000	ENSPCAG00000010775	RC3H1	70	100.000	Procavia_capensis
ENSEEUG00000014861	RC3H1	78	100.000	ENSPCOG00000021795	RC3H1	79	100.000	Propithecus_coquereli
ENSEEUG00000014861	RC3H1	85	93.162	ENSPVAG00000007593	RC3H1	82	93.162	Pteropus_vampyrus
ENSEEUG00000014861	RC3H1	74	69.871	ENSPNAG00000023439	rc3h1a	81	91.608	Pygocentrus_nattereri
ENSEEUG00000014861	RC3H1	93	83.302	ENSRBIG00000037743	RC3H1	83	97.059	Rhinopithecus_bieti
ENSEEUG00000014861	RC3H1	93	83.302	ENSRROG00000036546	RC3H1	83	97.059	Rhinopithecus_roxellana
ENSEEUG00000014861	RC3H1	79	80.952	ENSSBOG00000010664	RC3H1	88	80.952	Saimiri_boliviensis_boliviensis
ENSEEUG00000014861	RC3H1	93	82.189	ENSSHAG00000007589	RC3H1	83	94.538	Sarcophilus_harrisii
ENSEEUG00000014861	RC3H1	80	74.324	ENSSARG00000004660	RC3H1	69	88.112	Sorex_araneus
ENSEEUG00000014861	RC3H1	93	73.284	ENSSPUG00000018472	RC3H1	89	73.284	Sphenodon_punctatus
ENSEEUG00000014861	RC3H1	93	83.302	ENSSSCG00000015498	RC3H1	83	97.059	Sus_scrofa
ENSEEUG00000014861	RC3H1	88	80.891	ENSTGUG00000004090	RC3H1	84	80.891	Taeniopygia_guttata
ENSEEUG00000014861	RC3H1	86	87.640	ENSTBEG00000005015	RC3H1	82	87.640	Tupaia_belangeri
ENSEEUG00000014861	RC3H1	93	83.117	ENSTTRG00000008572	RC3H1	83	97.059	Tursiops_truncatus
ENSEEUG00000014861	RC3H1	93	83.302	ENSUAMG00000019525	RC3H1	83	93.162	Ursus_americanus
ENSEEUG00000014861	RC3H1	93	83.302	ENSUMAG00000020087	RC3H1	89	83.302	Ursus_maritimus
ENSEEUG00000014861	RC3H1	78	98.601	ENSVPAG00000002591	RC3H1	75	98.601	Vicugna_pacos
ENSEEUG00000014861	RC3H1	93	82.931	ENSVVUG00000014201	RC3H1	93	79.425	Vulpes_vulpes
ENSEEUG00000014861	RC3H1	93	77.532	ENSXETG00000020030	rc3h1	89	77.532	Xenopus_tropicalis