EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000014927 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA1
Alias: ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SWI|hSNF2L
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 1
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 120447 bases
Position: chrGeneScaffold_1536:14759-135205
Accession: 11097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000013646	ResIII	PF04851.15	3e-12	1	1
ENSEEUP00000013646	DEAD	PF00270.29	9.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000014948	SMARCA1-201	2901	-	ENSEEUP00000013646	966 (aa)	-	UPI0000F639F9

Gene Model

Click here to download ENSEEUG00000014927's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000014927's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000014927	SMARCA1	80	86.711	ENSEEUG00000013176	SMARCA5	80	86.711

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000014927	SMARCA1	84	97.682	ENSG00000102038	SMARCA1	77	97.682	Homo_sapiens
ENSEEUG00000014927	SMARCA1	80	83.775	ENSAPOG00000016035	smarca5	79	86.531	Acanthochromis_polyacanthus
ENSEEUG00000014927	SMARCA1	83	97.682	ENSAMEG00000015218	SMARCA1	75	97.682	Ailuropoda_melanoleuca
ENSEEUG00000014927	SMARCA1	73	86.325	ENSACIG00000016982	smarca5	80	86.325	Amphilophus_citrinellus
ENSEEUG00000014927	SMARCA1	80	83.775	ENSAOCG00000015578	smarca5	76	83.775	Amphiprion_ocellaris
ENSEEUG00000014927	SMARCA1	80	83.775	ENSAPEG00000011117	smarca5	79	87.151	Amphiprion_percula
ENSEEUG00000014927	SMARCA1	83	84.106	ENSATEG00000012894	smarca5	78	84.106	Anabas_testudineus
ENSEEUG00000014927	SMARCA1	80	92.715	ENSAPLG00000013149	SMARCA1	81	92.715	Anas_platyrhynchos
ENSEEUG00000014927	SMARCA1	82	91.722	ENSACAG00000011376	SMARCA1	76	91.722	Anolis_carolinensis
ENSEEUG00000014927	SMARCA1	83	97.682	ENSANAG00000023098	SMARCA1	76	97.682	Aotus_nancymaae
ENSEEUG00000014927	SMARCA1	80	84.106	ENSACLG00000025356	smarca5	76	84.106	Astatotilapia_calliptera
ENSEEUG00000014927	SMARCA1	79	89.057	ENSAMXG00000011227	smarca1	81	92.737	Astyanax_mexicanus
ENSEEUG00000014927	SMARCA1	80	83.444	ENSAMXG00000005709	smarca5	76	83.444	Astyanax_mexicanus
ENSEEUG00000014927	SMARCA1	84	97.682	ENSBTAG00000002292	SMARCA1	77	97.682	Bos_taurus
ENSEEUG00000014927	SMARCA1	82	58.609	WBGene00002169	isw-1	79	58.609	Caenorhabditis_elegans
ENSEEUG00000014927	SMARCA1	83	97.682	ENSCJAG00000002868	SMARCA1	75	97.682	Callithrix_jacchus
ENSEEUG00000014927	SMARCA1	83	98.013	ENSCAFG00000018673	SMARCA1	79	99.441	Canis_familiaris
ENSEEUG00000014927	SMARCA1	82	98.013	ENSCAFG00020001751	SMARCA1	75	98.013	Canis_lupus_dingo
ENSEEUG00000014927	SMARCA1	84	98.013	ENSCHIG00000009837	SMARCA1	77	98.013	Capra_hircus
ENSEEUG00000014927	SMARCA1	83	97.351	ENSTSYG00000004240	SMARCA1	80	97.342	Carlito_syrichta
ENSEEUG00000014927	SMARCA1	84	95.364	ENSCPOG00000013601	SMARCA1	78	95.364	Cavia_porcellus
ENSEEUG00000014927	SMARCA1	83	97.351	ENSCCAG00000030817	SMARCA1	77	97.351	Cebus_capucinus
ENSEEUG00000014927	SMARCA1	83	97.682	ENSCATG00000015921	SMARCA1	77	97.682	Cercocebus_atys
ENSEEUG00000014927	SMARCA1	84	95.033	ENSCLAG00000002171	SMARCA1	77	95.033	Chinchilla_lanigera
ENSEEUG00000014927	SMARCA1	82	97.682	ENSCSAG00000008460	SMARCA1	75	97.682	Chlorocebus_sabaeus
ENSEEUG00000014927	SMARCA1	82	92.715	ENSCPBG00000001146	SMARCA1	75	92.715	Chrysemys_picta_bellii
ENSEEUG00000014927	SMARCA1	81	72.185	ENSCING00000004110	swi/snf	77	72.185	Ciona_intestinalis
ENSEEUG00000014927	SMARCA1	81	71.523	ENSCSAVG00000004620	-	78	78.082	Ciona_savignyi
ENSEEUG00000014927	SMARCA1	83	98.013	ENSCANG00000007183	SMARCA1	75	98.013	Colobus_angolensis_palliatus
ENSEEUG00000014927	SMARCA1	84	96.026	ENSCGRG00001010776	Smarca1	77	96.026	Cricetulus_griseus_chok1gshd
ENSEEUG00000014927	SMARCA1	84	96.026	ENSCGRG00000015301	Smarca1	81	96.026	Cricetulus_griseus_crigri
ENSEEUG00000014927	SMARCA1	82	84.106	ENSCSEG00000000328	smarca5	77	84.106	Cynoglossus_semilaevis
ENSEEUG00000014927	SMARCA1	80	84.437	ENSCVAG00000008668	smarca5	79	86.667	Cyprinodon_variegatus
ENSEEUG00000014927	SMARCA1	82	87.417	ENSDARG00000012776	smarca1	79	87.417	Danio_rerio
ENSEEUG00000014927	SMARCA1	80	81.457	ENSDARG00000052348	smarca5	76	81.457	Danio_rerio
ENSEEUG00000014927	SMARCA1	82	96.358	ENSDNOG00000004315	SMARCA1	77	96.358	Dasypus_novemcinctus
ENSEEUG00000014927	SMARCA1	83	95.695	ENSDORG00000009270	Smarca1	77	95.695	Dipodomys_ordii
ENSEEUG00000014927	SMARCA1	80	71.854	FBgn0011604	Iswi	77	72.185	Drosophila_melanogaster
ENSEEUG00000014927	SMARCA1	69	93.750	ENSETEG00000017426	SMARCA1	70	93.750	Echinops_telfairi
ENSEEUG00000014927	SMARCA1	80	80.464	ENSEBUG00000001239	smarca5	79	80.464	Eptatretus_burgeri
ENSEEUG00000014927	SMARCA1	83	95.033	ENSEASG00005008218	SMARCA1	80	95.033	Equus_asinus_asinus
ENSEEUG00000014927	SMARCA1	83	97.682	ENSECAG00000012106	SMARCA1	75	97.682	Equus_caballus
ENSEEUG00000014927	SMARCA1	81	88.411	ENSELUG00000010515	smarca1	78	88.411	Esox_lucius
ENSEEUG00000014927	SMARCA1	83	97.682	ENSFCAG00000018496	SMARCA1	75	97.682	Felis_catus
ENSEEUG00000014927	SMARCA1	78	92.384	ENSFALG00000000209	SMARCA1	82	92.384	Ficedula_albicollis
ENSEEUG00000014927	SMARCA1	84	96.358	ENSFDAG00000009818	SMARCA1	80	96.358	Fukomys_damarensis
ENSEEUG00000014927	SMARCA1	80	84.437	ENSFHEG00000007687	smarca5	75	87.347	Fundulus_heteroclitus
ENSEEUG00000014927	SMARCA1	80	93.046	ENSGALG00000008431	SMARCA1	79	93.046	Gallus_gallus
ENSEEUG00000014927	SMARCA1	80	84.106	ENSGAFG00000017731	smarca5	77	84.106	Gambusia_affinis
ENSEEUG00000014927	SMARCA1	82	92.715	ENSGAGG00000023575	SMARCA1	82	92.715	Gopherus_agassizii
ENSEEUG00000014927	SMARCA1	57	97.682	ENSGGOG00000012841	-	70	97.682	Gorilla_gorilla
ENSEEUG00000014927	SMARCA1	84	95.033	ENSHGLG00000003080	SMARCA1	77	95.033	Heterocephalus_glaber_female
ENSEEUG00000014927	SMARCA1	84	95.033	ENSHGLG00100001102	SMARCA1	86	94.982	Heterocephalus_glaber_male
ENSEEUG00000014927	SMARCA1	80	83.444	ENSHCOG00000005458	smarca5	77	83.444	Hippocampus_comes
ENSEEUG00000014927	SMARCA1	80	83.113	ENSIPUG00000005229	SMARCA5	78	83.113	Ictalurus_punctatus
ENSEEUG00000014927	SMARCA1	82	87.748	ENSIPUG00000016905	Smarca1	81	87.748	Ictalurus_punctatus
ENSEEUG00000014927	SMARCA1	84	97.682	ENSSTOG00000014524	SMARCA1	77	97.682	Ictidomys_tridecemlineatus
ENSEEUG00000014927	SMARCA1	83	97.020	ENSJJAG00000002593	Smarca1	77	97.020	Jaculus_jaculus
ENSEEUG00000014927	SMARCA1	80	85.099	ENSKMAG00000003777	smarca5	77	85.099	Kryptolebias_marmoratus
ENSEEUG00000014927	SMARCA1	78	83.775	ENSLBEG00000013295	SMARCA1	81	86.667	Labrus_bergylta
ENSEEUG00000014927	SMARCA1	80	83.775	ENSLBEG00000018112	smarca5	77	83.775	Labrus_bergylta
ENSEEUG00000014927	SMARCA1	82	90.397	ENSLACG00000016697	SMARCA1	79	90.397	Latimeria_chalumnae
ENSEEUG00000014927	SMARCA1	80	90.397	ENSLOCG00000014591	smarca1	78	90.397	Lepisosteus_oculatus
ENSEEUG00000014927	SMARCA1	83	96.689	ENSLAFG00000000896	SMARCA1	81	96.689	Loxodonta_africana
ENSEEUG00000014927	SMARCA1	83	97.682	ENSMFAG00000002117	SMARCA1	80	97.682	Macaca_fascicularis
ENSEEUG00000014927	SMARCA1	83	97.682	ENSMMUG00000008818	SMARCA1	83	97.342	Macaca_mulatta
ENSEEUG00000014927	SMARCA1	83	97.682	ENSMNEG00000041768	SMARCA1	80	97.682	Macaca_nemestrina
ENSEEUG00000014927	SMARCA1	83	97.682	ENSMLEG00000043198	SMARCA1	75	97.682	Mandrillus_leucophaeus
ENSEEUG00000014927	SMARCA1	80	84.106	ENSMAMG00000014294	smarca5	76	84.106	Mastacembelus_armatus
ENSEEUG00000014927	SMARCA1	80	84.106	ENSMZEG00005009369	smarca5	76	84.106	Maylandia_zebra
ENSEEUG00000014927	SMARCA1	81	93.046	ENSMGAG00000007042	SMARCA1	79	93.046	Meleagris_gallopavo
ENSEEUG00000014927	SMARCA1	84	96.689	ENSMAUG00000008133	Smarca1	77	96.689	Mesocricetus_auratus
ENSEEUG00000014927	SMARCA1	83	97.020	ENSMICG00000015768	SMARCA1	75	97.020	Microcebus_murinus
ENSEEUG00000014927	SMARCA1	84	95.695	ENSMOCG00000009464	Smarca1	77	95.695	Microtus_ochrogaster
ENSEEUG00000014927	SMARCA1	80	83.775	ENSMMOG00000005547	smarca5	79	83.775	Mola_mola
ENSEEUG00000014927	SMARCA1	82	90.728	ENSMODG00000013187	-	77	90.728	Monodelphis_domestica
ENSEEUG00000014927	SMARCA1	80	83.775	ENSMALG00000002081	smarca5	80	81.494	Monopterus_albus
ENSEEUG00000014927	SMARCA1	83	97.682	MGP_CAROLIEiJ_G0033034	Smarca1	77	97.682	Mus_caroli
ENSEEUG00000014927	SMARCA1	83	97.682	ENSMUSG00000031099	Smarca1	77	97.682	Mus_musculus
ENSEEUG00000014927	SMARCA1	83	97.351	MGP_PahariEiJ_G0031579	Smarca1	77	97.351	Mus_pahari
ENSEEUG00000014927	SMARCA1	83	97.682	MGP_SPRETEiJ_G0034192	Smarca1	77	97.682	Mus_spretus
ENSEEUG00000014927	SMARCA1	83	97.682	ENSMPUG00000017423	SMARCA1	71	97.682	Mustela_putorius_furo
ENSEEUG00000014927	SMARCA1	83	97.351	ENSMLUG00000029614	SMARCA1	75	97.351	Myotis_lucifugus
ENSEEUG00000014927	SMARCA1	84	97.351	ENSNGAG00000006492	Smarca1	77	97.351	Nannospalax_galili
ENSEEUG00000014927	SMARCA1	80	84.106	ENSNBRG00000004463	smarca5	80	84.106	Neolamprologus_brichardi
ENSEEUG00000014927	SMARCA1	83	97.306	ENSNLEG00000015179	SMARCA1	80	97.306	Nomascus_leucogenys
ENSEEUG00000014927	SMARCA1	78	91.391	ENSMEUG00000008819	SMARCA1	80	91.391	Notamacropus_eugenii
ENSEEUG00000014927	SMARCA1	84	95.364	ENSODEG00000012163	SMARCA1	77	95.364	Octodon_degus
ENSEEUG00000014927	SMARCA1	80	84.106	ENSONIG00000009993	smarca5	76	84.106	Oreochromis_niloticus
ENSEEUG00000014927	SMARCA1	82	93.046	ENSOANG00000002862	SMARCA1	82	93.046	Ornithorhynchus_anatinus
ENSEEUG00000014927	SMARCA1	82	96.358	ENSOCUG00000001047	SMARCA1	75	96.358	Oryctolagus_cuniculus
ENSEEUG00000014927	SMARCA1	80	83.775	ENSORLG00000021998	smarca5	76	83.775	Oryzias_latipes
ENSEEUG00000014927	SMARCA1	80	83.775	ENSORLG00020017679	smarca5	76	83.775	Oryzias_latipes_hni
ENSEEUG00000014927	SMARCA1	80	83.775	ENSORLG00015017210	smarca5	76	83.775	Oryzias_latipes_hsok
ENSEEUG00000014927	SMARCA1	80	83.775	ENSOMEG00000000086	smarca5	76	83.775	Oryzias_melastigma
ENSEEUG00000014927	SMARCA1	84	97.351	ENSOGAG00000004399	SMARCA1	77	97.351	Otolemur_garnettii
ENSEEUG00000014927	SMARCA1	83	98.013	ENSOARG00000014638	SMARCA1	81	98.013	Ovis_aries
ENSEEUG00000014927	SMARCA1	83	97.682	ENSPPAG00000034647	SMARCA1	75	97.682	Pan_paniscus
ENSEEUG00000014927	SMARCA1	83	98.013	ENSPPRG00000008929	SMARCA1	75	98.013	Panthera_pardus
ENSEEUG00000014927	SMARCA1	82	98.013	ENSPTIG00000000915	SMARCA1	77	98.013	Panthera_tigris_altaica
ENSEEUG00000014927	SMARCA1	83	97.682	ENSPTRG00000049876	SMARCA1	77	97.682	Pan_troglodytes
ENSEEUG00000014927	SMARCA1	83	97.682	ENSPANG00000003871	SMARCA1	75	97.682	Papio_anubis
ENSEEUG00000014927	SMARCA1	82	83.721	ENSPKIG00000013411	smarca1	81	83.721	Paramormyrops_kingsleyae
ENSEEUG00000014927	SMARCA1	83	92.715	ENSPSIG00000010101	SMARCA1	82	92.715	Pelodiscus_sinensis
ENSEEUG00000014927	SMARCA1	84	97.682	ENSPEMG00000017503	Smarca1	77	97.682	Peromyscus_maniculatus_bairdii
ENSEEUG00000014927	SMARCA1	83	91.722	ENSPCIG00000015460	SMARCA1	79	91.722	Phascolarctos_cinereus
ENSEEUG00000014927	SMARCA1	80	84.437	ENSPFOG00000007649	smarca5	77	84.437	Poecilia_formosa
ENSEEUG00000014927	SMARCA1	80	84.437	ENSPLAG00000003363	smarca5	77	84.437	Poecilia_latipinna
ENSEEUG00000014927	SMARCA1	80	84.106	ENSPMEG00000019849	smarca5	77	84.106	Poecilia_mexicana
ENSEEUG00000014927	SMARCA1	80	84.106	ENSPREG00000023250	smarca5	77	84.106	Poecilia_reticulata
ENSEEUG00000014927	SMARCA1	82	88.079	ENSPPYG00000020703	SMARCA1	75	88.079	Pongo_abelii
ENSEEUG00000014927	SMARCA1	68	97.020	ENSPCOG00000020722	SMARCA1	81	96.774	Propithecus_coquereli
ENSEEUG00000014927	SMARCA1	78	96.639	ENSPVAG00000003805	SMARCA1	72	96.639	Pteropus_vampyrus
ENSEEUG00000014927	SMARCA1	54	84.106	ENSPNYG00000012299	smarca5	80	84.106	Pundamilia_nyererei
ENSEEUG00000014927	SMARCA1	82	97.351	ENSRNOG00000003762	Smarca1	75	97.351	Rattus_norvegicus
ENSEEUG00000014927	SMARCA1	83	98.013	ENSRROG00000034167	SMARCA1	75	98.013	Rhinopithecus_roxellana
ENSEEUG00000014927	SMARCA1	83	97.351	ENSSBOG00000020641	SMARCA1	81	97.351	Saimiri_boliviensis_boliviensis
ENSEEUG00000014927	SMARCA1	83	81.126	ENSSHAG00000013518	SMARCA1	82	81.126	Sarcophilus_harrisii
ENSEEUG00000014927	SMARCA1	80	89.073	ENSSFOG00015009043	smarca1	78	89.073	Scleropages_formosus
ENSEEUG00000014927	SMARCA1	80	82.724	ENSSFOG00015016794	smarca5	82	82.724	Scleropages_formosus
ENSEEUG00000014927	SMARCA1	80	83.444	ENSSMAG00000004801	smarca5	77	83.444	Scophthalmus_maximus
ENSEEUG00000014927	SMARCA1	80	84.437	ENSSDUG00000020690	smarca5	77	84.437	Seriola_dumerili
ENSEEUG00000014927	SMARCA1	80	84.437	ENSSLDG00000025190	smarca5	77	84.437	Seriola_lalandi_dorsalis
ENSEEUG00000014927	SMARCA1	70	98.492	ENSSARG00000000842	SMARCA1	68	98.492	Sorex_araneus
ENSEEUG00000014927	SMARCA1	83	91.391	ENSSPUG00000000590	SMARCA1	78	91.391	Sphenodon_punctatus
ENSEEUG00000014927	SMARCA1	80	84.106	ENSSPAG00000002894	smarca5	78	86.939	Stegastes_partitus
ENSEEUG00000014927	SMARCA1	83	98.013	ENSSSCG00000012649	SMARCA1	77	98.013	Sus_scrofa
ENSEEUG00000014927	SMARCA1	80	92.384	ENSTGUG00000003899	-	81	92.384	Taeniopygia_guttata
ENSEEUG00000014927	SMARCA1	80	84.437	ENSTRUG00000014094	smarca5	76	84.437	Takifugu_rubripes
ENSEEUG00000014927	SMARCA1	80	80.132	ENSTNIG00000017717	smarca5	76	80.132	Tetraodon_nigroviridis
ENSEEUG00000014927	SMARCA1	78	93.089	ENSTBEG00000014973	SMARCA1	76	93.089	Tupaia_belangeri
ENSEEUG00000014927	SMARCA1	84	93.046	ENSTTRG00000006168	SMARCA1	82	93.046	Tursiops_truncatus
ENSEEUG00000014927	SMARCA1	82	97.682	ENSUAMG00000020201	SMARCA1	75	97.682	Ursus_americanus
ENSEEUG00000014927	SMARCA1	83	97.682	ENSUMAG00000004073	SMARCA1	79	97.682	Ursus_maritimus
ENSEEUG00000014927	SMARCA1	68	98.013	ENSVPAG00000010492	-	68	98.013	Vicugna_pacos
ENSEEUG00000014927	SMARCA1	82	98.013	ENSVVUG00000008878	SMARCA1	83	98.013	Vulpes_vulpes
ENSEEUG00000014927	SMARCA1	81	90.066	ENSXETG00000001526	smarca1	80	90.066	Xenopus_tropicalis
ENSEEUG00000014927	SMARCA1	80	84.106	ENSXCOG00000011170	smarca5	79	84.106	Xiphophorus_couchianus
ENSEEUG00000014927	SMARCA1	80	84.106	ENSXMAG00000009678	smarca5	82	85.768	Xiphophorus_maculatus