EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSEEUG00000015039 (Gene tree)
Gene ID
-
Gene Symbol
CPSF6
Alias
CFIM|CFIM68|CFIM72|HPBRII-4|HPBRII-7
Full Name
cleavage and polyadenylation specific factor 6
Gene Type
protein_coding
Species
Erinaceus_europaeus
Status
putative
Strand
Plus strand
Length
14855 bases
Position
chrGeneScaffold_2226:6500-21354
Accession
13871
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSEEUP00000013726RRM_1PF00076.222.7e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSEEUT00000015037CPSF6-2011707-ENSEEUP00000013726568 (aa)-UPI0000F6206B
Gene Model
Click here to download ENSEEUG00000015039's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000015039's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSEEUG00000015039CPSF610099.296ENSG00000111605CPSF69799.296Homo_sapiens
ENSEEUG00000015039CPSF66254.872ENSG00000149532CPSF79054.598Homo_sapiens
ENSEEUG00000015039CPSF610099.472ENSAMEG00000011781CPSF69799.472Ailuropoda_melanoleuca
ENSEEUG00000015039CPSF66039.698ENSAOCG00000012357CPSF76941.566Amphiprion_ocellaris
ENSEEUG00000015039CPSF65950.249ENSANAG00000024635CPSF76750.276Aotus_nancymaae
ENSEEUG00000015039CPSF610099.296ENSANAG00000019240CPSF69999.296Aotus_nancymaae
ENSEEUG00000015039CPSF65790.419ENSAMXG00000016745CPSF67089.091Astyanax_mexicanus
ENSEEUG00000015039CPSF65955.385ENSBTAG00000015263CPSF76755.429Bos_taurus
ENSEEUG00000015039CPSF610099.120ENSBTAG00000007323CPSF69799.120Bos_taurus
ENSEEUG00000015039CPSF66254.872ENSCJAG00000019282CPSF77954.857Callithrix_jacchus
ENSEEUG00000015039CPSF610099.121ENSCJAG00000001798CPSF69799.121Callithrix_jacchus
ENSEEUG00000015039CPSF65955.385ENSCAFG00000016152CPSF76756.000Canis_familiaris
ENSEEUG00000015039CPSF610099.296ENSCAFG00000000424CPSF69999.296Canis_familiaris
ENSEEUG00000015039CPSF65955.385ENSCAFG00020012753CPSF76756.000Canis_lupus_dingo
ENSEEUG00000015039CPSF610099.296ENSCAFG00020016950CPSF69799.296Canis_lupus_dingo
ENSEEUG00000015039CPSF65955.385ENSCHIG00000014655CPSF76755.429Capra_hircus
ENSEEUG00000015039CPSF610099.120ENSCHIG00000010792CPSF69799.120Capra_hircus
ENSEEUG00000015039CPSF610099.296ENSTSYG00000008591CPSF699100.000Carlito_syrichta
ENSEEUG00000015039CPSF65955.385ENSTSYG00000010138-6756.000Carlito_syrichta
ENSEEUG00000015039CPSF65955.385ENSCAPG00000006384CPSF77056.000Cavia_aperea
ENSEEUG00000015039CPSF65955.385ENSCPOG00000009980CPSF76756.000Cavia_porcellus
ENSEEUG00000015039CPSF610098.944ENSCPOG00000015201CPSF69798.944Cavia_porcellus
ENSEEUG00000015039CPSF65954.872ENSCCAG00000032367CPSF76755.429Cebus_capucinus
ENSEEUG00000015039CPSF610099.121ENSCCAG00000028149CPSF69799.121Cebus_capucinus
ENSEEUG00000015039CPSF66254.872ENSCATG00000042801CPSF77355.429Cercocebus_atys
ENSEEUG00000015039CPSF610099.296ENSCATG00000039288CPSF69799.296Cercocebus_atys
ENSEEUG00000015039CPSF65955.385ENSCLAG00000003174CPSF76755.429Chinchilla_lanigera
ENSEEUG00000015039CPSF610098.944ENSCLAG00000010149CPSF610098.944Chinchilla_lanigera
ENSEEUG00000015039CPSF610099.296ENSCSAG00000004232CPSF69799.296Chlorocebus_sabaeus
ENSEEUG00000015039CPSF66254.872ENSCSAG00000006414CPSF77355.429Chlorocebus_sabaeus
ENSEEUG00000015039CPSF610091.021ENSCPBG00000013322CPSF69691.021Chrysemys_picta_bellii
ENSEEUG00000015039CPSF610099.296ENSCANG00000037294CPSF610099.296Colobus_angolensis_palliatus
ENSEEUG00000015039CPSF65955.897ENSCGRG00001020382Cpsf76757.714Cricetulus_griseus_chok1gshd
ENSEEUG00000015039CPSF610099.296ENSCGRG00001018082Cpsf69799.296Cricetulus_griseus_chok1gshd
ENSEEUG00000015039CPSF66554.378ENSCGRG00000017954Cpsf77357.714Cricetulus_griseus_crigri
ENSEEUG00000015039CPSF610099.296ENSCGRG00000016909Cpsf610099.296Cricetulus_griseus_crigri
ENSEEUG00000015039CPSF65041.237ENSCSEG00000001956CPSF75746.154Cynoglossus_semilaevis
ENSEEUG00000015039CPSF66435.874ENSCVAG00000007392CPSF76644.521Cyprinodon_variegatus
ENSEEUG00000015039CPSF610092.619ENSDNOG00000015292CPSF69692.619Dasypus_novemcinctus
ENSEEUG00000015039CPSF65955.385ENSDNOG00000018517CPSF77955.429Dasypus_novemcinctus
ENSEEUG00000015039CPSF610099.296ENSDORG00000002950Cpsf610099.296Dipodomys_ordii
ENSEEUG00000015039CPSF610091.901ENSETEG00000002097CPSF69791.901Echinops_telfairi
ENSEEUG00000015039CPSF65955.385ENSEASG00005008196CPSF76756.000Equus_asinus_asinus
ENSEEUG00000015039CPSF610099.296ENSEASG00005008066CPSF69799.296Equus_asinus_asinus
ENSEEUG00000015039CPSF65953.297ENSECAG00000018521CPSF78655.429Equus_caballus
ENSEEUG00000015039CPSF610099.296ENSECAG00000015988CPSF69799.296Equus_caballus
ENSEEUG00000015039CPSF610099.120ENSFCAG00000002855CPSF69799.120Felis_catus
ENSEEUG00000015039CPSF65955.385ENSFCAG00000013677CPSF78655.429Felis_catus
ENSEEUG00000015039CPSF65853.763ENSFALG00000011927CPSF77156.395Ficedula_albicollis
ENSEEUG00000015039CPSF610091.213ENSFALG00000010157CPSF69991.213Ficedula_albicollis
ENSEEUG00000015039CPSF610098.768ENSFDAG00000002281CPSF69798.768Fukomys_damarensis
ENSEEUG00000015039CPSF65955.897ENSFDAG00000003919CPSF76756.000Fukomys_damarensis
ENSEEUG00000015039CPSF65955.959ENSGALG00000040962CPSF75956.647Gallus_gallus
ENSEEUG00000015039CPSF610091.021ENSGAGG00000010228CPSF69691.021Gopherus_agassizii
ENSEEUG00000015039CPSF610099.121ENSGGOG00000008211CPSF69799.121Gorilla_gorilla
ENSEEUG00000015039CPSF610098.768ENSHGLG00000000792CPSF69798.768Heterocephalus_glaber_female
ENSEEUG00000015039CPSF66255.897ENSHGLG00000019090-7356.000Heterocephalus_glaber_female
ENSEEUG00000015039CPSF610098.768ENSHGLG00100013861CPSF610098.768Heterocephalus_glaber_male
ENSEEUG00000015039CPSF65955.385ENSSTOG00000007708CPSF76756.000Ictidomys_tridecemlineatus
ENSEEUG00000015039CPSF610099.296ENSSTOG00000014133CPSF610092.782Ictidomys_tridecemlineatus
ENSEEUG00000015039CPSF610099.296ENSJJAG00000014647Cpsf610099.296Jaculus_jaculus
ENSEEUG00000015039CPSF66255.385ENSJJAG00000019390Cpsf77356.000Jaculus_jaculus
ENSEEUG00000015039CPSF65740.331ENSLBEG00000000947CPSF76736.486Labrus_bergylta
ENSEEUG00000015039CPSF66142.949ENSLACG00000005542CPSF76942.949Latimeria_chalumnae
ENSEEUG00000015039CPSF610092.782ENSLAFG00000030413CPSF69692.782Loxodonta_africana
ENSEEUG00000015039CPSF610099.121ENSMFAG00000045318CPSF69799.121Macaca_fascicularis
ENSEEUG00000015039CPSF65954.872ENSMFAG00000001401CPSF76855.429Macaca_fascicularis
ENSEEUG00000015039CPSF610099.121ENSMMUG00000002921CPSF69799.121Macaca_mulatta
ENSEEUG00000015039CPSF66254.872ENSMMUG00000015280CPSF77355.429Macaca_mulatta
ENSEEUG00000015039CPSF66254.872ENSMNEG00000029585CPSF77355.429Macaca_nemestrina
ENSEEUG00000015039CPSF610099.121ENSMNEG00000036311CPSF69799.121Macaca_nemestrina
ENSEEUG00000015039CPSF610099.296ENSMLEG00000003957CPSF610099.296Mandrillus_leucophaeus
ENSEEUG00000015039CPSF65954.872ENSMLEG00000031269CPSF76855.429Mandrillus_leucophaeus
ENSEEUG00000015039CPSF69540.761ENSMGAG00000004876CPSF75961.446Meleagris_gallopavo
ENSEEUG00000015039CPSF65955.385ENSMAUG00000013020Cpsf76756.000Mesocricetus_auratus
ENSEEUG00000015039CPSF610099.296ENSMAUG00000013240Cpsf69799.296Mesocricetus_auratus
ENSEEUG00000015039CPSF65955.385ENSMICG00000013788CPSF76756.000Microcebus_murinus
ENSEEUG00000015039CPSF610099.296ENSMICG00000007385-9799.296Microcebus_murinus
ENSEEUG00000015039CPSF610099.296ENSMOCG00000013982Cpsf69799.296Microtus_ochrogaster
ENSEEUG00000015039CPSF65955.385ENSMOCG00000000072Cpsf76756.000Microtus_ochrogaster
ENSEEUG00000015039CPSF610092.430ENSMODG00000007123CPSF69692.430Monodelphis_domestica
ENSEEUG00000015039CPSF66890.155ENSMALG00000014908cpsf67491.525Monopterus_albus
ENSEEUG00000015039CPSF65955.385MGP_CAROLIEiJ_G0022690Cpsf76756.000Mus_caroli
ENSEEUG00000015039CPSF610099.296MGP_CAROLIEiJ_G0015834Cpsf69799.296Mus_caroli
ENSEEUG00000015039CPSF610098.944ENSMUSG00000055531Cpsf69798.944Mus_musculus
ENSEEUG00000015039CPSF65955.385ENSMUSG00000034820Cpsf76756.000Mus_musculus
ENSEEUG00000015039CPSF65955.385MGP_PahariEiJ_G0014184Cpsf76756.000Mus_pahari
ENSEEUG00000015039CPSF68299.003MGP_PahariEiJ_G0031253Cpsf68390.850Mus_pahari
ENSEEUG00000015039CPSF610098.944MGP_SPRETEiJ_G0016657Cpsf69798.944Mus_spretus
ENSEEUG00000015039CPSF65955.385MGP_SPRETEiJ_G0023604Cpsf76756.000Mus_spretus
ENSEEUG00000015039CPSF610090.685ENSMPUG00000017502CPSF69790.685Mustela_putorius_furo
ENSEEUG00000015039CPSF65954.359ENSMPUG00000014163CPSF76654.857Mustela_putorius_furo
ENSEEUG00000015039CPSF67694.928ENSMLUG00000028728-8882.424Myotis_lucifugus
ENSEEUG00000015039CPSF66255.385ENSMLUG00000013278CPSF77356.000Myotis_lucifugus
ENSEEUG00000015039CPSF66785.246ENSMLUG00000023960-7683.784Myotis_lucifugus
ENSEEUG00000015039CPSF610090.685ENSMLUG00000004172-9790.685Myotis_lucifugus
ENSEEUG00000015039CPSF610099.296ENSNGAG00000015901Cpsf69799.296Nannospalax_galili
ENSEEUG00000015039CPSF65955.385ENSNGAG00000005031Cpsf76756.000Nannospalax_galili
ENSEEUG00000015039CPSF65954.872ENSNLEG00000002529CPSF76155.429Nomascus_leucogenys
ENSEEUG00000015039CPSF610098.946ENSNLEG00000003798CPSF696100.000Nomascus_leucogenys
ENSEEUG00000015039CPSF610096.127ENSMEUG00000015041CPSF69696.127Notamacropus_eugenii
ENSEEUG00000015039CPSF65953.571ENSMEUG00000002261CPSF76755.814Notamacropus_eugenii
ENSEEUG00000015039CPSF610098.768ENSOPRG00000005199CPSF610098.768Ochotona_princeps
ENSEEUG00000015039CPSF67379.389ENSODEG00000007109-6677.698Octodon_degus
ENSEEUG00000015039CPSF65953.030ENSODEG00000002610CPSF76755.618Octodon_degus
ENSEEUG00000015039CPSF610090.685ENSODEG00000018399-9690.685Octodon_degus
ENSEEUG00000015039CPSF67797.581ENSODEG00000004418-9097.189Octodon_degus
ENSEEUG00000015039CPSF67484.231ENSONIG00000011702cpsf68583.784Oreochromis_niloticus
ENSEEUG00000015039CPSF610099.296ENSOCUG00000013505CPSF69799.296Oryctolagus_cuniculus
ENSEEUG00000015039CPSF67049.537ENSOCUG00000024726CPSF76755.429Oryctolagus_cuniculus
ENSEEUG00000015039CPSF67035.931ENSORLG00000006495CPSF75943.939Oryzias_latipes
ENSEEUG00000015039CPSF66936.087ENSORLG00020012657CPSF76141.667Oryzias_latipes_hni
ENSEEUG00000015039CPSF66837.799ENSOMEG00000000539CPSF77037.267Oryzias_melastigma
ENSEEUG00000015039CPSF65955.385ENSOGAG00000027958CPSF76256.000Otolemur_garnettii
ENSEEUG00000015039CPSF610090.685ENSOGAG00000031988CPSF69990.685Otolemur_garnettii
ENSEEUG00000015039CPSF610098.946ENSOARG00000020532CPSF610099.067Ovis_aries
ENSEEUG00000015039CPSF65955.385ENSOARG00000012937CPSF76155.429Ovis_aries
ENSEEUG00000015039CPSF610096.485ENSPPAG00000005301CPSF69896.485Pan_paniscus
ENSEEUG00000015039CPSF65954.872ENSPPAG00000028232CPSF76955.429Pan_paniscus
ENSEEUG00000015039CPSF65955.385ENSPPRG00000008538CPSF76756.000Panthera_pardus
ENSEEUG00000015039CPSF610099.120ENSPPRG00000021620CPSF69799.120Panthera_pardus
ENSEEUG00000015039CPSF65955.385ENSPTIG00000021699CPSF76756.000Panthera_tigris_altaica
ENSEEUG00000015039CPSF69499.067ENSPTIG00000004079CPSF610099.067Panthera_tigris_altaica
ENSEEUG00000015039CPSF610099.121ENSPTRG00000005205CPSF69799.121Pan_troglodytes
ENSEEUG00000015039CPSF65954.872ENSPTRG00000003742CPSF76955.429Pan_troglodytes
ENSEEUG00000015039CPSF610099.296ENSPANG00000011641CPSF69799.296Papio_anubis
ENSEEUG00000015039CPSF65954.872ENSPANG00000006037CPSF76855.429Papio_anubis
ENSEEUG00000015039CPSF65547.458ENSPKIG00000018054CPSF76647.205Paramormyrops_kingsleyae
ENSEEUG00000015039CPSF65992.982ENSPSIG00000016360CPSF67792.982Pelodiscus_sinensis
ENSEEUG00000015039CPSF66255.385ENSPEMG00000012648Cpsf77356.000Peromyscus_maniculatus_bairdii
ENSEEUG00000015039CPSF610099.120ENSPEMG00000007973Cpsf610099.120Peromyscus_maniculatus_bairdii
ENSEEUG00000015039CPSF66346.262ENSPCIG00000002551CPSF77955.191Phascolarctos_cinereus
ENSEEUG00000015039CPSF610098.944ENSPCIG00000019063CPSF69798.944Phascolarctos_cinereus
ENSEEUG00000015039CPSF68284.118ENSPFOG00000006990cpsf65381.853Poecilia_formosa
ENSEEUG00000015039CPSF65372.368ENSPMEG00000001353cpsf65069.000Poecilia_mexicana
ENSEEUG00000015039CPSF65954.872ENSPPYG00000003188CPSF76755.429Pongo_abelii
ENSEEUG00000015039CPSF610092.606ENSPPYG00000004756CPSF69692.606Pongo_abelii
ENSEEUG00000015039CPSF610099.296ENSPCAG00000011574CPSF69799.296Procavia_capensis
ENSEEUG00000015039CPSF610098.946ENSPCOG00000024384CPSF69798.946Propithecus_coquereli
ENSEEUG00000015039CPSF65955.385ENSPCOG00000011976CPSF76756.000Propithecus_coquereli
ENSEEUG00000015039CPSF65955.385ENSPVAG00000010675CPSF76756.000Pteropus_vampyrus
ENSEEUG00000015039CPSF610098.768ENSPVAG00000015753CPSF69798.768Pteropus_vampyrus
ENSEEUG00000015039CPSF66254.872ENSRNOG00000020668Cpsf77355.814Rattus_norvegicus
ENSEEUG00000015039CPSF610092.606ENSRNOG00000005927Cpsf69692.606Rattus_norvegicus
ENSEEUG00000015039CPSF66254.872ENSRBIG00000031429CPSF78654.857Rhinopithecus_bieti
ENSEEUG00000015039CPSF610098.946ENSRBIG00000042827CPSF69798.946Rhinopithecus_bieti
ENSEEUG00000015039CPSF610099.120ENSRROG00000042758CPSF69799.120Rhinopithecus_roxellana
ENSEEUG00000015039CPSF65954.872ENSRROG00000045009CPSF76755.429Rhinopithecus_roxellana
ENSEEUG00000015039CPSF610099.121ENSSBOG00000010652CPSF610099.254Saimiri_boliviensis_boliviensis
ENSEEUG00000015039CPSF65954.872ENSSBOG00000018431CPSF76755.429Saimiri_boliviensis_boliviensis
ENSEEUG00000015039CPSF65378.738ENSSHAG00000006635CPSF69486.162Sarcophilus_harrisii
ENSEEUG00000015039CPSF66842.157ENSSFOG00015010288cpsf77339.326Scleropages_formosus
ENSEEUG00000015039CPSF69591.993ENSSARG00000006743CPSF69191.993Sorex_araneus
ENSEEUG00000015039CPSF65956.250ENSSPUG00000019344CPSF76956.977Sphenodon_punctatus
ENSEEUG00000015039CPSF65955.385ENSSSCG00000013083CPSF77955.429Sus_scrofa
ENSEEUG00000015039CPSF610099.296ENSSSCG00000038031CPSF610099.254Sus_scrofa
ENSEEUG00000015039CPSF65751.111ENSTGUG00000006513CPSF76756.322Taeniopygia_guttata
ENSEEUG00000015039CPSF69492.351ENSUAMG00000023492CPSF610092.351Ursus_americanus
ENSEEUG00000015039CPSF65955.385ENSUAMG00000017809CPSF76756.000Ursus_americanus
ENSEEUG00000015039CPSF69499.254ENSUMAG00000020779CPSF610099.254Ursus_maritimus
ENSEEUG00000015039CPSF66255.385ENSUMAG00000011825CPSF77356.000Ursus_maritimus
ENSEEUG00000015039CPSF610099.296ENSVPAG00000008469CPSF610099.296Vicugna_pacos
ENSEEUG00000015039CPSF69499.254ENSVVUG00000010156-10099.254Vulpes_vulpes
ENSEEUG00000015039CPSF65955.385ENSVVUG00000004939CPSF77955.429Vulpes_vulpes
ENSEEUG00000015039CPSF69738.750ENSXETG00000006715cpsf76253.571Xenopus_tropicalis

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