EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000015205 (Gene tree)
Gene ID: -
Gene Symbol: CHD3
Alias: Mi-2a|Mi2-ALPHA|ZFH
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 29032 bases
Position: chrGeneScaffold_3631:80779-109810
Accession: 1918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000013928	ResIII	PF04851.15	7.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000015262	CHD3-201	5889	-	ENSEEUP00000013928	1962 (aa)	-	UPI0000F635E5

Gene Model

Click here to download ENSEEUG00000015205's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000015205's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000015205	CHD3	58	81.818	ENSEEUG00000002772	CHD5	59	81.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000015205	CHD3	92	100.000	ENSG00000170004	CHD3	99	97.338	Homo_sapiens
ENSEEUG00000015205	CHD3	77	74.400	ENSAPOG00000005614	chd3	89	90.722	Acanthochromis_polyacanthus
ENSEEUG00000015205	CHD3	62	100.000	ENSAMEG00000003025	-	89	98.305	Ailuropoda_melanoleuca
ENSEEUG00000015205	CHD3	75	92.784	ENSACIG00000019671	chd3	93	92.784	Amphilophus_citrinellus
ENSEEUG00000015205	CHD3	76	82.883	ENSAOCG00000023784	chd3	92	75.519	Amphiprion_ocellaris
ENSEEUG00000015205	CHD3	84	91.667	ENSAPEG00000006341	chd3	82	91.667	Amphiprion_percula
ENSEEUG00000015205	CHD3	84	92.708	ENSATEG00000000848	chd3	86	92.708	Anabas_testudineus
ENSEEUG00000015205	CHD3	91	77.854	ENSACAG00000004276	CHD3	88	77.816	Anolis_carolinensis
ENSEEUG00000015205	CHD3	92	100.000	ENSANAG00000034323	CHD3	92	98.305	Aotus_nancymaae
ENSEEUG00000015205	CHD3	81	91.753	ENSACLG00000009222	chd3	88	91.753	Astatotilapia_calliptera
ENSEEUG00000015205	CHD3	92	96.154	ENSBTAG00000014377	CHD3	89	94.915	Bos_taurus
ENSEEUG00000015205	CHD3	92	98.077	ENSCJAG00000014766	CHD3	91	96.610	Callithrix_jacchus
ENSEEUG00000015205	CHD3	92	100.000	ENSCAFG00000016859	CHD3	91	98.305	Canis_familiaris
ENSEEUG00000015205	CHD3	88	98.305	ENSCAFG00020007422	CHD3	92	98.305	Canis_lupus_dingo
ENSEEUG00000015205	CHD3	92	96.154	ENSCHIG00000016737	CHD3	92	94.915	Capra_hircus
ENSEEUG00000015205	CHD3	92	100.000	ENSTSYG00000035658	CHD3	91	98.305	Carlito_syrichta
ENSEEUG00000015205	CHD3	93	98.305	ENSCAPG00000014864	CHD3	91	98.305	Cavia_aperea
ENSEEUG00000015205	CHD3	93	98.305	ENSCPOG00000022653	CHD3	91	98.305	Cavia_porcellus
ENSEEUG00000015205	CHD3	92	98.077	ENSCCAG00000034792	CHD3	91	96.610	Cebus_capucinus
ENSEEUG00000015205	CHD3	92	100.000	ENSCATG00000041717	CHD3	91	98.305	Cercocebus_atys
ENSEEUG00000015205	CHD3	92	100.000	ENSCLAG00000010523	CHD3	93	98.305	Chinchilla_lanigera
ENSEEUG00000015205	CHD3	92	100.000	ENSCSAG00000011122	CHD3	93	98.305	Chlorocebus_sabaeus
ENSEEUG00000015205	CHD3	82	97.561	ENSCPBG00000011966	CHD3	92	97.561	Chrysemys_picta_bellii
ENSEEUG00000015205	CHD3	92	100.000	ENSCANG00000037641	CHD3	92	98.305	Colobus_angolensis_palliatus
ENSEEUG00000015205	CHD3	92	96.154	ENSCGRG00001011306	Chd3	93	94.915	Cricetulus_griseus_chok1gshd
ENSEEUG00000015205	CHD3	87	94.915	ENSCGRG00000007878	Chd3	93	94.915	Cricetulus_griseus_crigri
ENSEEUG00000015205	CHD3	81	89.691	ENSCSEG00000004489	chd3	88	80.634	Cynoglossus_semilaevis
ENSEEUG00000015205	CHD3	81	73.600	ENSCVAG00000007293	chd3	88	73.600	Cyprinodon_variegatus
ENSEEUG00000015205	CHD3	81	92.784	ENSDARG00000021405	chd3	90	92.784	Danio_rerio
ENSEEUG00000015205	CHD3	92	98.077	ENSDNOG00000047846	CHD3	92	96.610	Dasypus_novemcinctus
ENSEEUG00000015205	CHD3	93	94.915	ENSDORG00000010713	Chd3	93	94.915	Dipodomys_ordii
ENSEEUG00000015205	CHD3	90	84.363	ENSETEG00000017733	CHD3	92	84.363	Echinops_telfairi
ENSEEUG00000015205	CHD3	59	82.292	ENSEBUG00000008310	chd3	78	79.208	Eptatretus_burgeri
ENSEEUG00000015205	CHD3	86	94.915	ENSEASG00005019360	CHD3	92	94.915	Equus_asinus_asinus
ENSEEUG00000015205	CHD3	86	96.610	ENSECAG00000010051	CHD3	92	96.610	Equus_caballus
ENSEEUG00000015205	CHD3	75	90.244	ENSELUG00000019499	chd3	95	90.244	Esox_lucius
ENSEEUG00000015205	CHD3	92	100.000	ENSFCAG00000009629	CHD3	89	98.305	Felis_catus
ENSEEUG00000015205	CHD3	93	96.610	ENSFDAG00000008220	CHD3	91	96.610	Fukomys_damarensis
ENSEEUG00000015205	CHD3	77	90.722	ENSGMOG00000013599	chd3	80	90.722	Gadus_morhua
ENSEEUG00000015205	CHD3	59	69.316	ENSGAFG00000004055	chd3	98	70.377	Gambusia_affinis
ENSEEUG00000015205	CHD3	86	76.800	ENSGACG00000019275	chd3	92	64.578	Gasterosteus_aculeatus
ENSEEUG00000015205	CHD3	76	78.916	ENSGAGG00000013164	CHD3	98	79.151	Gopherus_agassizii
ENSEEUG00000015205	CHD3	92	100.000	ENSGGOG00000013496	CHD3	92	98.305	Gorilla_gorilla
ENSEEUG00000015205	CHD3	93	94.915	ENSHGLG00000012017	CHD3	92	94.915	Heterocephalus_glaber_female
ENSEEUG00000015205	CHD3	80	96.396	ENSHGLG00100013902	CHD3	91	94.915	Heterocephalus_glaber_male
ENSEEUG00000015205	CHD3	84	71.852	ENSHCOG00000010170	chd3	83	89.691	Hippocampus_comes
ENSEEUG00000015205	CHD3	76	85.870	ENSIPUG00000003271	chd3	88	85.870	Ictalurus_punctatus
ENSEEUG00000015205	CHD3	92	100.000	ENSSTOG00000025907	CHD3	93	98.305	Ictidomys_tridecemlineatus
ENSEEUG00000015205	CHD3	92	94.231	ENSJJAG00000017633	Chd3	93	93.220	Jaculus_jaculus
ENSEEUG00000015205	CHD3	77	93.902	ENSKMAG00000019292	chd3	85	92.632	Kryptolebias_marmoratus
ENSEEUG00000015205	CHD3	83	75.610	ENSLBEG00000028485	chd3	85	75.610	Labrus_bergylta
ENSEEUG00000015205	CHD3	82	81.356	ENSLACG00000008031	CHD3	90	70.714	Latimeria_chalumnae
ENSEEUG00000015205	CHD3	85	85.088	ENSLOCG00000013965	chd3	84	83.761	Lepisosteus_oculatus
ENSEEUG00000015205	CHD3	90	84.190	ENSLAFG00000000572	CHD3	94	84.190	Loxodonta_africana
ENSEEUG00000015205	CHD3	92	100.000	ENSMFAG00000020113	CHD3	92	98.305	Macaca_fascicularis
ENSEEUG00000015205	CHD3	92	98.077	ENSMMUG00000022221	CHD3	91	96.610	Macaca_mulatta
ENSEEUG00000015205	CHD3	92	100.000	ENSMNEG00000001728	CHD3	92	98.305	Macaca_nemestrina
ENSEEUG00000015205	CHD3	92	100.000	ENSMLEG00000032249	CHD3	91	98.305	Mandrillus_leucophaeus
ENSEEUG00000015205	CHD3	75	90.722	ENSMAMG00000000564	chd3	89	90.722	Mastacembelus_armatus
ENSEEUG00000015205	CHD3	92	96.154	ENSMAUG00000013873	Chd3	92	94.915	Mesocricetus_auratus
ENSEEUG00000015205	CHD3	93	98.305	ENSMICG00000008741	CHD3	91	98.305	Microcebus_murinus
ENSEEUG00000015205	CHD3	93	93.220	ENSMOCG00000004848	Chd3	93	93.220	Microtus_ochrogaster
ENSEEUG00000015205	CHD3	85	68.716	ENSMMOG00000012699	chd3	87	91.753	Mola_mola
ENSEEUG00000015205	CHD3	86	85.942	ENSMODG00000007509	CHD3	92	85.942	Monodelphis_domestica
ENSEEUG00000015205	CHD3	92	94.444	MGP_CAROLIEiJ_G0016564	Chd3	89	93.443	Mus_caroli
ENSEEUG00000015205	CHD3	92	94.444	ENSMUSG00000018474	Chd3	89	93.443	Mus_musculus
ENSEEUG00000015205	CHD3	92	94.444	MGP_PahariEiJ_G0017695	Chd3	89	93.443	Mus_pahari
ENSEEUG00000015205	CHD3	93	91.803	MGP_SPRETEiJ_G0017400	Chd3	89	91.803	Mus_spretus
ENSEEUG00000015205	CHD3	80	98.305	ENSMPUG00000008861	CHD3	92	98.305	Mustela_putorius_furo
ENSEEUG00000015205	CHD3	93	96.610	ENSMLUG00000014643	-	91	96.610	Myotis_lucifugus
ENSEEUG00000015205	CHD3	92	98.077	ENSNGAG00000000773	Chd3	91	96.610	Nannospalax_galili
ENSEEUG00000015205	CHD3	76	92.784	ENSNBRG00000000636	chd3	90	92.784	Neolamprologus_brichardi
ENSEEUG00000015205	CHD3	90	85.714	ENSNLEG00000009770	CHD3	91	85.317	Nomascus_leucogenys
ENSEEUG00000015205	CHD3	77	89.600	ENSMEUG00000005852	CHD3	78	89.600	Notamacropus_eugenii
ENSEEUG00000015205	CHD3	88	88.270	ENSOPRG00000011069	CHD3	92	88.270	Ochotona_princeps
ENSEEUG00000015205	CHD3	92	100.000	ENSODEG00000017785	CHD3	92	98.305	Octodon_degus
ENSEEUG00000015205	CHD3	81	91.753	ENSONIG00000009292	chd3	92	68.575	Oreochromis_niloticus
ENSEEUG00000015205	CHD3	92	94.915	ENSOCUG00000029299	CHD3	92	94.915	Oryctolagus_cuniculus
ENSEEUG00000015205	CHD3	73	70.612	ENSORLG00000007107	chd3	88	69.332	Oryzias_latipes
ENSEEUG00000015205	CHD3	57	66.990	ENSORLG00020008387	chd3	95	67.608	Oryzias_latipes_hni
ENSEEUG00000015205	CHD3	77	78.125	ENSOMEG00000013691	chd3	95	71.306	Oryzias_melastigma
ENSEEUG00000015205	CHD3	93	98.305	ENSOGAG00000003216	CHD3	93	98.305	Otolemur_garnettii
ENSEEUG00000015205	CHD3	93	94.915	ENSOARG00000017855	CHD3	91	94.915	Ovis_aries
ENSEEUG00000015205	CHD3	93	98.305	ENSPPAG00000032886	CHD3	92	98.305	Pan_paniscus
ENSEEUG00000015205	CHD3	92	100.000	ENSPPRG00000000626	CHD3	91	98.305	Panthera_pardus
ENSEEUG00000015205	CHD3	92	100.000	ENSPTRG00000008714	CHD3	92	98.305	Pan_troglodytes
ENSEEUG00000015205	CHD3	92	100.000	ENSPANG00000023938	CHD3	92	98.305	Papio_anubis
ENSEEUG00000015205	CHD3	82	92.857	ENSPKIG00000006305	chd3	87	92.857	Paramormyrops_kingsleyae
ENSEEUG00000015205	CHD3	55	83.668	ENSPSIG00000010177	CHD3	98	83.942	Pelodiscus_sinensis
ENSEEUG00000015205	CHD3	92	94.231	ENSPEMG00000014262	Chd3	92	93.220	Peromyscus_maniculatus_bairdii
ENSEEUG00000015205	CHD3	93	86.441	ENSPCIG00000005442	CHD3	90	90.323	Phascolarctos_cinereus
ENSEEUG00000015205	CHD3	81	89.796	ENSPFOG00000012464	chd3	78	89.796	Poecilia_formosa
ENSEEUG00000015205	CHD3	78	89.796	ENSPLAG00000002887	chd3	87	89.796	Poecilia_latipinna
ENSEEUG00000015205	CHD3	54	74.505	ENSPMEG00000016725	chd3	94	67.100	Poecilia_mexicana
ENSEEUG00000015205	CHD3	82	89.796	ENSPREG00000011044	chd3	88	89.796	Poecilia_reticulata
ENSEEUG00000015205	CHD3	91	98.305	ENSPPYG00000007940	CHD3	91	98.305	Pongo_abelii
ENSEEUG00000015205	CHD3	89	92.308	ENSPCAG00000004350	CHD3	89	91.525	Procavia_capensis
ENSEEUG00000015205	CHD3	93	98.305	ENSPCOG00000020952	CHD3	91	98.305	Propithecus_coquereli
ENSEEUG00000015205	CHD3	79	94.915	ENSPVAG00000016344	CHD3	80	94.915	Pteropus_vampyrus
ENSEEUG00000015205	CHD3	86	90.722	ENSPNAG00000020393	chd3	87	90.722	Pygocentrus_nattereri
ENSEEUG00000015205	CHD3	86	94.444	ENSRNOG00000009722	Chd3	92	93.443	Rattus_norvegicus
ENSEEUG00000015205	CHD3	92	100.000	ENSRBIG00000033562	CHD3	92	98.305	Rhinopithecus_bieti
ENSEEUG00000015205	CHD3	92	100.000	ENSRROG00000029554	CHD3	93	98.305	Rhinopithecus_roxellana
ENSEEUG00000015205	CHD3	92	100.000	ENSSBOG00000020719	CHD3	92	98.305	Saimiri_boliviensis_boliviensis
ENSEEUG00000015205	CHD3	92	86.441	ENSSHAG00000014412	CHD3	92	86.441	Sarcophilus_harrisii
ENSEEUG00000015205	CHD3	74	90.816	ENSSFOG00015023123	chd3	83	90.816	Scleropages_formosus
ENSEEUG00000015205	CHD3	79	91.753	ENSSMAG00000006451	chd3	92	91.753	Scophthalmus_maximus
ENSEEUG00000015205	CHD3	55	66.850	ENSSDUG00000005792	chd3	95	67.125	Seriola_dumerili
ENSEEUG00000015205	CHD3	81	90.722	ENSSPAG00000013694	chd3	92	90.722	Stegastes_partitus
ENSEEUG00000015205	CHD3	92	98.077	ENSSSCG00000021363	CHD3	92	96.610	Sus_scrofa
ENSEEUG00000015205	CHD3	75	70.651	ENSTRUG00000014990	chd3	89	70.429	Takifugu_rubripes
ENSEEUG00000015205	CHD3	84	90.722	ENSTNIG00000012998	chd3	92	66.518	Tetraodon_nigroviridis
ENSEEUG00000015205	CHD3	61	97.500	ENSTBEG00000011454	-	68	97.500	Tupaia_belangeri
ENSEEUG00000015205	CHD3	91	100.000	ENSTTRG00000010295	CHD3	89	98.305	Tursiops_truncatus
ENSEEUG00000015205	CHD3	86	98.305	ENSUAMG00000005475	CHD3	92	98.305	Ursus_americanus
ENSEEUG00000015205	CHD3	51	97.436	ENSVPAG00000010794	-	58	97.436	Vicugna_pacos
ENSEEUG00000015205	CHD3	88	98.305	ENSVVUG00000028011	CHD3	91	98.305	Vulpes_vulpes
ENSEEUG00000015205	CHD3	88	67.273	ENSXETG00000012991	chd3	87	66.276	Xenopus_tropicalis
ENSEEUG00000015205	CHD3	52	76.158	ENSXCOG00000000809	chd3	95	76.384	Xiphophorus_couchianus
ENSEEUG00000015205	CHD3	75	89.796	ENSXMAG00000016035	chd3	94	89.796	Xiphophorus_maculatus