EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000015217 (Gene tree)
Gene ID: -
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 27124 bases
Position: chrGeneScaffold_4782:100331-127454
Accession: 25652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000013897	MMR_HSR1	PF01926.23	5.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000015224	LSG1-201	1983	-	ENSEEUP00000013897	660 (aa)	-	UPI0000F6394A

Gene Model

Click here to download ENSEEUG00000015217's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000015217's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000015217	LSG1	87	84.483	ENSG00000041802	LSG1	87	84.483	Homo_sapiens
ENSEEUG00000015217	LSG1	87	55.833	ENSAPOG00000009694	lsg1	86	55.833	Acanthochromis_polyacanthus
ENSEEUG00000015217	LSG1	87	80.342	ENSAMEG00000009343	LSG1	87	80.342	Ailuropoda_melanoleuca
ENSEEUG00000015217	LSG1	85	60.684	ENSACIG00000012406	lsg1	86	60.684	Amphilophus_citrinellus
ENSEEUG00000015217	LSG1	87	56.667	ENSAOCG00000016066	lsg1	86	56.667	Amphiprion_ocellaris
ENSEEUG00000015217	LSG1	87	55.833	ENSAPEG00000003252	lsg1	86	55.833	Amphiprion_percula
ENSEEUG00000015217	LSG1	85	60.684	ENSATEG00000011794	lsg1	86	60.684	Anabas_testudineus
ENSEEUG00000015217	LSG1	75	63.021	ENSACAG00000004222	LSG1	79	62.760	Anolis_carolinensis
ENSEEUG00000015217	LSG1	87	83.621	ENSANAG00000021153	LSG1	87	83.621	Aotus_nancymaae
ENSEEUG00000015217	LSG1	87	58.974	ENSACLG00000000520	lsg1	87	58.974	Astatotilapia_calliptera
ENSEEUG00000015217	LSG1	87	60.684	ENSAMXG00000008271	lsg1	86	60.684	Astyanax_mexicanus
ENSEEUG00000015217	LSG1	87	81.897	ENSBTAG00000008461	LSG1	88	81.897	Bos_taurus
ENSEEUG00000015217	LSG1	87	80.172	ENSCJAG00000013962	LSG1	87	80.172	Callithrix_jacchus
ENSEEUG00000015217	LSG1	75	82.051	ENSCAFG00000013445	LSG1	79	82.051	Canis_familiaris
ENSEEUG00000015217	LSG1	87	82.051	ENSCAFG00020002216	LSG1	87	82.051	Canis_lupus_dingo
ENSEEUG00000015217	LSG1	87	79.487	ENSCHIG00000015769	LSG1	87	79.487	Capra_hircus
ENSEEUG00000015217	LSG1	87	81.897	ENSTSYG00000001447	LSG1	87	81.897	Carlito_syrichta
ENSEEUG00000015217	LSG1	75	80.172	ENSCAPG00000009856	LSG1	79	80.172	Cavia_aperea
ENSEEUG00000015217	LSG1	87	83.621	ENSCCAG00000035744	LSG1	88	83.621	Cebus_capucinus
ENSEEUG00000015217	LSG1	87	83.621	ENSCATG00000042060	LSG1	87	83.621	Cercocebus_atys
ENSEEUG00000015217	LSG1	87	83.621	ENSCSAG00000008796	LSG1	80	83.621	Chlorocebus_sabaeus
ENSEEUG00000015217	LSG1	87	66.102	ENSCPBG00000015941	LSG1	72	66.102	Chrysemys_picta_bellii
ENSEEUG00000015217	LSG1	87	83.621	ENSCANG00000030709	LSG1	87	83.621	Colobus_angolensis_palliatus
ENSEEUG00000015217	LSG1	87	81.034	ENSCGRG00001019846	Lsg1	87	81.034	Cricetulus_griseus_chok1gshd
ENSEEUG00000015217	LSG1	87	81.034	ENSCGRG00000014617	Lsg1	87	81.034	Cricetulus_griseus_crigri
ENSEEUG00000015217	LSG1	75	59.829	ENSCSEG00000008522	lsg1	86	59.829	Cynoglossus_semilaevis
ENSEEUG00000015217	LSG1	75	59.845	ENSCVAG00000002484	lsg1	86	56.410	Cyprinodon_variegatus
ENSEEUG00000015217	LSG1	87	63.248	ENSDARG00000015352	lsg1	87	63.248	Danio_rerio
ENSEEUG00000015217	LSG1	87	81.034	ENSDNOG00000006224	LSG1	87	81.034	Dasypus_novemcinctus
ENSEEUG00000015217	LSG1	57	45.932	FBgn0266284	Ns3	54	46.053	Drosophila_melanogaster
ENSEEUG00000015217	LSG1	69	78.788	ENSETEG00000003888	LSG1	70	78.788	Echinops_telfairi
ENSEEUG00000015217	LSG1	75	54.404	ENSEBUG00000003119	lsg1	72	54.688	Eptatretus_burgeri
ENSEEUG00000015217	LSG1	87	84.483	ENSEASG00005000678	LSG1	87	84.483	Equus_asinus_asinus
ENSEEUG00000015217	LSG1	87	84.483	ENSECAG00000017659	LSG1	87	84.483	Equus_caballus
ENSEEUG00000015217	LSG1	87	53.719	ENSELUG00000023973	lsg1	87	53.719	Esox_lucius
ENSEEUG00000015217	LSG1	87	80.342	ENSFCAG00000024957	LSG1	87	80.342	Felis_catus
ENSEEUG00000015217	LSG1	75	64.103	ENSFALG00000007210	LSG1	76	64.103	Ficedula_albicollis
ENSEEUG00000015217	LSG1	87	78.448	ENSFDAG00000017373	LSG1	86	78.448	Fukomys_damarensis
ENSEEUG00000015217	LSG1	75	60.345	ENSFHEG00000003680	lsg1	87	60.345	Fundulus_heteroclitus
ENSEEUG00000015217	LSG1	59	76.768	ENSGMOG00000015834	lsg1	74	75.490	Gadus_morhua
ENSEEUG00000015217	LSG1	75	66.379	ENSGALG00000007058	LSG1	67	65.812	Gallus_gallus
ENSEEUG00000015217	LSG1	75	59.375	ENSGAFG00000015831	lsg1	87	58.621	Gambusia_affinis
ENSEEUG00000015217	LSG1	75	60.313	ENSGACG00000009323	lsg1	86	58.333	Gasterosteus_aculeatus
ENSEEUG00000015217	LSG1	87	85.345	ENSGGOG00000000520	LSG1	87	85.345	Gorilla_gorilla
ENSEEUG00000015217	LSG1	87	58.974	ENSHBUG00000005659	lsg1	87	58.974	Haplochromis_burtoni
ENSEEUG00000015217	LSG1	87	80.172	ENSHGLG00000017390	LSG1	86	80.172	Heterocephalus_glaber_female
ENSEEUG00000015217	LSG1	87	80.172	ENSHGLG00100018587	LSG1	86	80.172	Heterocephalus_glaber_male
ENSEEUG00000015217	LSG1	75	58.120	ENSHCOG00000016848	lsg1	87	58.120	Hippocampus_comes
ENSEEUG00000015217	LSG1	87	62.393	ENSIPUG00000008631	lsg1	86	62.393	Ictalurus_punctatus
ENSEEUG00000015217	LSG1	68	81.818	ENSSTOG00000010234	LSG1	84	81.818	Ictidomys_tridecemlineatus
ENSEEUG00000015217	LSG1	87	81.739	ENSJJAG00000015513	Lsg1	86	81.739	Jaculus_jaculus
ENSEEUG00000015217	LSG1	85	58.120	ENSKMAG00000009681	lsg1	86	58.120	Kryptolebias_marmoratus
ENSEEUG00000015217	LSG1	75	58.974	ENSLBEG00000024261	lsg1	86	58.974	Labrus_bergylta
ENSEEUG00000015217	LSG1	87	67.521	ENSLACG00000013399	LSG1	87	67.521	Latimeria_chalumnae
ENSEEUG00000015217	LSG1	75	61.864	ENSLOCG00000004918	lsg1	87	61.864	Lepisosteus_oculatus
ENSEEUG00000015217	LSG1	87	78.448	ENSLAFG00000012919	-	87	78.448	Loxodonta_africana
ENSEEUG00000015217	LSG1	87	81.897	ENSMFAG00000039903	LSG1	87	81.897	Macaca_fascicularis
ENSEEUG00000015217	LSG1	87	82.759	ENSMMUG00000010708	LSG1	87	82.759	Macaca_mulatta
ENSEEUG00000015217	LSG1	87	82.759	ENSMNEG00000031538	LSG1	87	82.759	Macaca_nemestrina
ENSEEUG00000015217	LSG1	87	82.759	ENSMLEG00000041184	LSG1	87	82.759	Mandrillus_leucophaeus
ENSEEUG00000015217	LSG1	87	62.712	ENSMAMG00000000470	lsg1	86	62.712	Mastacembelus_armatus
ENSEEUG00000015217	LSG1	87	58.974	ENSMZEG00005017865	lsg1	87	58.974	Maylandia_zebra
ENSEEUG00000015217	LSG1	75	64.655	ENSMGAG00000007050	LSG1	85	64.103	Meleagris_gallopavo
ENSEEUG00000015217	LSG1	78	74.138	ENSMAUG00000016976	Lsg1	80	74.138	Mesocricetus_auratus
ENSEEUG00000015217	LSG1	87	81.897	ENSMICG00000049087	LSG1	87	81.897	Microcebus_murinus
ENSEEUG00000015217	LSG1	87	80.172	ENSMOCG00000022136	Lsg1	87	80.172	Microtus_ochrogaster
ENSEEUG00000015217	LSG1	70	80.000	ENSMMOG00000008884	lsg1	83	69.919	Mola_mola
ENSEEUG00000015217	LSG1	85	56.667	ENSMODG00000019828	LSG1	84	56.667	Monodelphis_domestica
ENSEEUG00000015217	LSG1	87	76.923	MGP_CAROLIEiJ_G0020648	Lsg1	87	76.923	Mus_caroli
ENSEEUG00000015217	LSG1	87	76.923	ENSMUSG00000022538	Lsg1	87	76.923	Mus_musculus
ENSEEUG00000015217	LSG1	85	79.487	MGP_PahariEiJ_G0016352	Lsg1	87	79.487	Mus_pahari
ENSEEUG00000015217	LSG1	87	76.923	MGP_SPRETEiJ_G0021544	Lsg1	87	76.923	Mus_spretus
ENSEEUG00000015217	LSG1	87	77.778	ENSMPUG00000003734	LSG1	87	77.778	Mustela_putorius_furo
ENSEEUG00000015217	LSG1	87	88.034	ENSMLUG00000012548	LSG1	87	88.034	Myotis_lucifugus
ENSEEUG00000015217	LSG1	87	81.034	ENSNGAG00000021872	Lsg1	88	81.034	Nannospalax_galili
ENSEEUG00000015217	LSG1	87	83.621	ENSNLEG00000008293	LSG1	87	83.621	Nomascus_leucogenys
ENSEEUG00000015217	LSG1	56	67.010	ENSMEUG00000009041	-	68	67.010	Notamacropus_eugenii
ENSEEUG00000015217	LSG1	87	59.829	ENSONIG00000002635	lsg1	86	59.829	Oreochromis_niloticus
ENSEEUG00000015217	LSG1	75	68.766	ENSOANG00000012742	LSG1	78	68.504	Ornithorhynchus_anatinus
ENSEEUG00000015217	LSG1	87	81.034	ENSOCUG00000004817	LSG1	87	81.034	Oryctolagus_cuniculus
ENSEEUG00000015217	LSG1	85	55.556	ENSORLG00000007695	lsg1	87	55.556	Oryzias_latipes
ENSEEUG00000015217	LSG1	85	54.701	ENSORLG00020016286	lsg1	87	54.701	Oryzias_latipes_hni
ENSEEUG00000015217	LSG1	85	54.701	ENSORLG00015012025	lsg1	87	54.701	Oryzias_latipes_hsok
ENSEEUG00000015217	LSG1	85	56.410	ENSOMEG00000022379	lsg1	86	56.410	Oryzias_melastigma
ENSEEUG00000015217	LSG1	87	81.034	ENSOGAG00000003475	LSG1	87	81.034	Otolemur_garnettii
ENSEEUG00000015217	LSG1	87	80.342	ENSOARG00000020403	LSG1	87	80.342	Ovis_aries
ENSEEUG00000015217	LSG1	87	83.621	ENSPPAG00000029271	LSG1	87	83.621	Pan_paniscus
ENSEEUG00000015217	LSG1	87	82.906	ENSPPRG00000010281	LSG1	86	82.906	Panthera_pardus
ENSEEUG00000015217	LSG1	87	83.761	ENSPTIG00000010789	LSG1	88	83.761	Panthera_tigris_altaica
ENSEEUG00000015217	LSG1	87	83.621	ENSPTRG00000015760	LSG1	87	83.621	Pan_troglodytes
ENSEEUG00000015217	LSG1	87	83.621	ENSPANG00000018249	LSG1	87	83.621	Papio_anubis
ENSEEUG00000015217	LSG1	75	62.185	ENSPKIG00000002895	lsg1	86	62.185	Paramormyrops_kingsleyae
ENSEEUG00000015217	LSG1	74	65.952	ENSPSIG00000009821	LSG1	76	65.812	Pelodiscus_sinensis
ENSEEUG00000015217	LSG1	75	59.318	ENSPMGG00000000931	lsg1	78	59.318	Periophthalmus_magnuspinnatus
ENSEEUG00000015217	LSG1	87	80.342	ENSPEMG00000012082	-	87	80.342	Peromyscus_maniculatus_bairdii
ENSEEUG00000015217	LSG1	87	53.333	ENSPMAG00000007451	lsg1	86	53.333	Petromyzon_marinus
ENSEEUG00000015217	LSG1	87	59.664	ENSPCIG00000013890	LSG1	70	59.664	Phascolarctos_cinereus
ENSEEUG00000015217	LSG1	75	59.126	ENSPFOG00000021882	lsg1	86	58.621	Poecilia_formosa
ENSEEUG00000015217	LSG1	75	59.483	ENSPLAG00000019536	lsg1	87	59.483	Poecilia_latipinna
ENSEEUG00000015217	LSG1	75	58.621	ENSPMEG00000017281	lsg1	86	58.621	Poecilia_mexicana
ENSEEUG00000015217	LSG1	74	60.345	ENSPREG00000006048	lsg1	89	60.345	Poecilia_reticulata
ENSEEUG00000015217	LSG1	79	71.772	ENSPPYG00000014425	LSG1	86	71.554	Pongo_abelii
ENSEEUG00000015217	LSG1	70	84.848	ENSPCAG00000005511	LSG1	70	84.848	Procavia_capensis
ENSEEUG00000015217	LSG1	87	83.621	ENSPCOG00000012360	LSG1	88	83.621	Propithecus_coquereli
ENSEEUG00000015217	LSG1	87	58.120	ENSPNYG00000021994	lsg1	87	58.120	Pundamilia_nyererei
ENSEEUG00000015217	LSG1	87	59.664	ENSPNAG00000015533	lsg1	87	59.664	Pygocentrus_nattereri
ENSEEUG00000015217	LSG1	87	76.923	ENSRNOG00000001727	Lsg1	87	76.923	Rattus_norvegicus
ENSEEUG00000015217	LSG1	87	84.483	ENSRBIG00000029053	LSG1	87	84.483	Rhinopithecus_bieti
ENSEEUG00000015217	LSG1	87	84.483	ENSRROG00000037702	LSG1	87	84.483	Rhinopithecus_roxellana
ENSEEUG00000015217	LSG1	87	82.759	ENSSBOG00000034938	LSG1	87	82.759	Saimiri_boliviensis_boliviensis
ENSEEUG00000015217	LSG1	65	63.385	ENSSHAG00000003487	LSG1	83	62.538	Sarcophilus_harrisii
ENSEEUG00000015217	LSG1	85	61.017	ENSSFOG00015008955	lsg1	86	61.017	Scleropages_formosus
ENSEEUG00000015217	LSG1	85	59.829	ENSSDUG00000004622	lsg1	87	59.829	Seriola_dumerili
ENSEEUG00000015217	LSG1	85	59.829	ENSSLDG00000010869	lsg1	86	59.829	Seriola_lalandi_dorsalis
ENSEEUG00000015217	LSG1	68	87.113	ENSSARG00000012981	LSG1	71	87.113	Sorex_araneus
ENSEEUG00000015217	LSG1	87	63.559	ENSSPUG00000016347	LSG1	87	63.559	Sphenodon_punctatus
ENSEEUG00000015217	LSG1	87	58.333	ENSSPAG00000005508	lsg1	87	58.333	Stegastes_partitus
ENSEEUG00000015217	LSG1	87	84.615	ENSSSCG00000011827	LSG1	87	84.615	Sus_scrofa
ENSEEUG00000015217	LSG1	75	62.393	ENSTGUG00000009068	LSG1	84	62.393	Taeniopygia_guttata
ENSEEUG00000015217	LSG1	75	59.829	ENSTRUG00000017380	lsg1	90	59.829	Takifugu_rubripes
ENSEEUG00000015217	LSG1	75	60.684	ENSTNIG00000015570	lsg1	86	60.684	Tetraodon_nigroviridis
ENSEEUG00000015217	LSG1	78	88.333	ENSTTRG00000000559	LSG1	78	88.333	Tursiops_truncatus
ENSEEUG00000015217	LSG1	87	80.342	ENSUAMG00000012454	LSG1	87	80.342	Ursus_americanus
ENSEEUG00000015217	LSG1	87	80.342	ENSUMAG00000000855	LSG1	87	80.342	Ursus_maritimus
ENSEEUG00000015217	LSG1	75	81.197	ENSVPAG00000012400	LSG1	79	81.197	Vicugna_pacos
ENSEEUG00000015217	LSG1	75	81.197	ENSVVUG00000008956	LSG1	78	81.197	Vulpes_vulpes
ENSEEUG00000015217	LSG1	87	64.957	ENSXETG00000003451	lsg1	86	64.486	Xenopus_tropicalis
ENSEEUG00000015217	LSG1	75	59.483	ENSXCOG00000003239	lsg1	87	59.483	Xiphophorus_couchianus
ENSEEUG00000015217	LSG1	75	59.829	ENSXMAG00000005536	lsg1	87	59.829	Xiphophorus_maculatus