EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSEEUG00000015422 (Gene tree)
Gene ID
-
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Erinaceus_europaeus
Status
putative
Strand
Plus strand
Length
65085 bases
Position
chrGeneScaffold_5222:274571-339655
Accession
2326
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSEEUP00000014079CPSF73-100_CPF11718.82.2e-5511
ENSEEUP00000014079Beta-CaspPF10996.81.4e-3311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSEEUT00000015425CPSF3-2012052-ENSEEUP00000014079683 (aa)-UPI00014F792C
Gene Model
Click here to download ENSEEUG00000015422's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000015422's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSEEUG00000015422CPSF37131.287ENSEEUG00000000838INTS118231.287
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSEEUG00000015422CPSF310083.918ENSG00000119203CPSF310083.918Homo_sapiens
ENSEEUG00000015422CPSF39970.735ENSAPOG00000022087cpsf39870.735Acanthochromis_polyacanthus
ENSEEUG00000015422CPSF37376.754ENSAPOG00000012241CPSF39076.660Acanthochromis_polyacanthus
ENSEEUG00000015422CPSF310084.064ENSAMEG00000008493CPSF310084.064Ailuropoda_melanoleuca
ENSEEUG00000015422CPSF39963.382ENSACIG00000009846cpsf39863.382Amphilophus_citrinellus
ENSEEUG00000015422CPSF39966.129ENSACIG00000023663CPSF39866.129Amphilophus_citrinellus
ENSEEUG00000015422CPSF39970.987ENSAOCG00000022056cpsf39870.987Amphiprion_ocellaris
ENSEEUG00000015422CPSF39972.941ENSAOCG00000010077CPSF39872.941Amphiprion_ocellaris
ENSEEUG00000015422CPSF39970.987ENSAPEG00000019526cpsf39871.341Amphiprion_percula
ENSEEUG00000015422CPSF39972.941ENSAPEG00000021167CPSF39872.941Amphiprion_percula
ENSEEUG00000015422CPSF39968.676ENSATEG00000014525CPSF39868.676Anabas_testudineus
ENSEEUG00000015422CPSF39971.072ENSATEG00000003959cpsf39971.072Anabas_testudineus
ENSEEUG00000015422CPSF39879.762ENSAPLG00000006941CPSF39879.762Anas_platyrhynchos
ENSEEUG00000015422CPSF39376.063ENSACAG00000001759CPSF39976.063Anolis_carolinensis
ENSEEUG00000015422CPSF310079.971ENSANAG00000031254CPSF310079.971Aotus_nancymaae
ENSEEUG00000015422CPSF39770.526ENSACLG00000014484cpsf39970.526Astatotilapia_calliptera
ENSEEUG00000015422CPSF39270.000ENSACLG00000018846CPSF39865.932Astatotilapia_calliptera
ENSEEUG00000015422CPSF39973.529ENSAMXG00000004786cpsf39873.529Astyanax_mexicanus
ENSEEUG00000015422CPSF310084.064ENSBTAG00000019735CPSF310084.064Bos_taurus
ENSEEUG00000015422CPSF39248.527WBGene00013460cpsf-39148.527Caenorhabditis_elegans
ENSEEUG00000015422CPSF310083.772ENSCJAG00000006276CPSF310083.772Callithrix_jacchus
ENSEEUG00000015422CPSF310084.064ENSCAFG00000003375CPSF39584.064Canis_familiaris
ENSEEUG00000015422CPSF39083.037ENSCAFG00020026799CPSF310083.037Canis_lupus_dingo
ENSEEUG00000015422CPSF310084.064ENSCHIG00000013973CPSF310084.064Capra_hircus
ENSEEUG00000015422CPSF310083.918ENSTSYG00000002967CPSF310083.918Carlito_syrichta
ENSEEUG00000015422CPSF39881.859ENSCAPG00000013851CPSF310081.859Cavia_aperea
ENSEEUG00000015422CPSF310082.310ENSCPOG00000011299CPSF310082.310Cavia_porcellus
ENSEEUG00000015422CPSF310083.772ENSCCAG00000036730CPSF310083.772Cebus_capucinus
ENSEEUG00000015422CPSF310081.314ENSCATG00000014770CPSF310081.314Cercocebus_atys
ENSEEUG00000015422CPSF310082.018ENSCLAG00000002727CPSF310082.018Chinchilla_lanigera
ENSEEUG00000015422CPSF38596.667ENSCSAG00000007125CPSF39396.667Chlorocebus_sabaeus
ENSEEUG00000015422CPSF366100.000ENSCHOG00000000180CPSF368100.000Choloepus_hoffmanni
ENSEEUG00000015422CPSF39980.352ENSCPBG00000014074CPSF39980.352Chrysemys_picta_bellii
ENSEEUG00000015422CPSF39956.642ENSCING00000007214-9856.642Ciona_intestinalis
ENSEEUG00000015422CPSF310070.717ENSCANG00000034435CPSF310070.717Colobus_angolensis_palliatus
ENSEEUG00000015422CPSF310083.480ENSCGRG00001013134Cpsf310083.480Cricetulus_griseus_chok1gshd
ENSEEUG00000015422CPSF310083.480ENSCGRG00000018319Cpsf310083.480Cricetulus_griseus_crigri
ENSEEUG00000015422CPSF39971.806ENSCSEG00000002021CPSF39871.806Cynoglossus_semilaevis
ENSEEUG00000015422CPSF39973.088ENSCVAG00000015067CPSF39873.088Cyprinodon_variegatus
ENSEEUG00000015422CPSF39973.824ENSDARG00000027649cpsf39873.824Danio_rerio
ENSEEUG00000015422CPSF310083.212ENSDNOG00000008940CPSF39583.212Dasypus_novemcinctus
ENSEEUG00000015422CPSF39582.796ENSDORG00000014263Cpsf310082.796Dipodomys_ordii
ENSEEUG00000015422CPSF39955.523FBgn0261065Cpsf739855.523Drosophila_melanogaster
ENSEEUG00000015422CPSF39570.200ENSETEG00000003893CPSF310070.200Echinops_telfairi
ENSEEUG00000015422CPSF39965.330ENSEBUG00000009018cpsf39865.473Eptatretus_burgeri
ENSEEUG00000015422CPSF310084.064ENSEASG00005003970CPSF310084.064Equus_asinus_asinus
ENSEEUG00000015422CPSF310084.064ENSECAG00000019911CPSF310084.064Equus_caballus
ENSEEUG00000015422CPSF39973.088ENSELUG00000013775cpsf39873.088Esox_lucius
ENSEEUG00000015422CPSF310084.064ENSFCAG00000007852CPSF310084.064Felis_catus
ENSEEUG00000015422CPSF39579.134ENSFALG00000006572CPSF310079.134Ficedula_albicollis
ENSEEUG00000015422CPSF39981.672ENSFDAG00000006317CPSF39981.672Fukomys_damarensis
ENSEEUG00000015422CPSF39970.250ENSFHEG00000014774cpsf39870.250Fundulus_heteroclitus
ENSEEUG00000015422CPSF39971.953ENSGMOG00000003157cpsf39971.953Gadus_morhua
ENSEEUG00000015422CPSF39979.442ENSGALG00000016424CPSF39979.442Gallus_gallus
ENSEEUG00000015422CPSF39963.104ENSGAFG00000019449cpsf39963.104Gambusia_affinis
ENSEEUG00000015422CPSF39972.901ENSGAFG00000008016CPSF39872.901Gambusia_affinis
ENSEEUG00000015422CPSF36882.655ENSGAGG00000025583CPSF39382.655Gopherus_agassizii
ENSEEUG00000015422CPSF310081.974ENSGGOG00000001757CPSF310082.835Gorilla_gorilla
ENSEEUG00000015422CPSF35968.395ENSHBUG00000014332CPSF39968.395Haplochromis_burtoni
ENSEEUG00000015422CPSF39970.778ENSHBUG00000001188cpsf39970.778Haplochromis_burtoni
ENSEEUG00000015422CPSF310081.579ENSHGLG00000000666CPSF39981.579Heterocephalus_glaber_female
ENSEEUG00000015422CPSF310081.579ENSHGLG00100007765CPSF39981.579Heterocephalus_glaber_male
ENSEEUG00000015422CPSF39971.618ENSHCOG00000015957CPSF39771.618Hippocampus_comes
ENSEEUG00000015422CPSF39970.088ENSHCOG00000007251cpsf39970.088Hippocampus_comes
ENSEEUG00000015422CPSF39971.912ENSIPUG00000023488cpsf39871.912Ictalurus_punctatus
ENSEEUG00000015422CPSF310083.772ENSSTOG00000004476CPSF310083.772Ictidomys_tridecemlineatus
ENSEEUG00000015422CPSF310082.310ENSJJAG00000023415Cpsf310082.310Jaculus_jaculus
ENSEEUG00000015422CPSF39970.294ENSKMAG00000002806cpsf39870.294Kryptolebias_marmoratus
ENSEEUG00000015422CPSF39972.500ENSKMAG00000007317CPSF39872.500Kryptolebias_marmoratus
ENSEEUG00000015422CPSF35566.756ENSLBEG00000015018-9966.756Labrus_bergylta
ENSEEUG00000015422CPSF39965.051ENSLBEG00000020569cpsf39465.051Labrus_bergylta
ENSEEUG00000015422CPSF39573.148ENSLBEG00000013492CPSF39873.148Labrus_bergylta
ENSEEUG00000015422CPSF39974.374ENSLACG00000008308CPSF39874.374Latimeria_chalumnae
ENSEEUG00000015422CPSF39974.449ENSLOCG00000016823cpsf39874.449Lepisosteus_oculatus
ENSEEUG00000015422CPSF39982.206ENSLAFG00000009467CPSF310082.206Loxodonta_africana
ENSEEUG00000015422CPSF310083.918ENSMFAG00000001339CPSF310083.918Macaca_fascicularis
ENSEEUG00000015422CPSF39582.998ENSMMUG00000018038CPSF310082.998Macaca_mulatta
ENSEEUG00000015422CPSF310071.199ENSMNEG00000039447CPSF310071.199Macaca_nemestrina
ENSEEUG00000015422CPSF310084.064ENSMLEG00000026825CPSF310084.064Mandrillus_leucophaeus
ENSEEUG00000015422CPSF39971.281ENSMAMG00000003076cpsf39871.281Mastacembelus_armatus
ENSEEUG00000015422CPSF39965.300ENSMAMG00000008835CPSF39865.300Mastacembelus_armatus
ENSEEUG00000015422CPSF39973.235ENSMZEG00005006258CPSF39873.235Maylandia_zebra
ENSEEUG00000015422CPSF39970.778ENSMZEG00005014358cpsf39970.778Maylandia_zebra
ENSEEUG00000015422CPSF39879.160ENSMGAG00000013995CPSF310079.160Meleagris_gallopavo
ENSEEUG00000015422CPSF35582.713ENSMAUG00000000166Cpsf310082.713Mesocricetus_auratus
ENSEEUG00000015422CPSF310078.624ENSMICG00000002363CPSF310078.624Microcebus_murinus
ENSEEUG00000015422CPSF310079.240ENSMOCG00000020067Cpsf310079.240Microtus_ochrogaster
ENSEEUG00000015422CPSF39467.442ENSMMOG00000018212CPSF39867.442Mola_mola
ENSEEUG00000015422CPSF38058.232ENSMMOG00000011923CPSF38462.411Mola_mola
ENSEEUG00000015422CPSF310080.897ENSMODG00000014703CPSF310080.897Monodelphis_domestica
ENSEEUG00000015422CPSF39971.554ENSMALG00000016416cpsf39971.554Monopterus_albus
ENSEEUG00000015422CPSF39367.812ENSMALG00000011474CPSF39967.812Monopterus_albus
ENSEEUG00000015422CPSF310083.187MGP_CAROLIEiJ_G0017640Cpsf310083.187Mus_caroli
ENSEEUG00000015422CPSF310083.187ENSMUSG00000054309Cpsf310083.187Mus_musculus
ENSEEUG00000015422CPSF310083.041MGP_PahariEiJ_G0029397Cpsf310083.041Mus_pahari
ENSEEUG00000015422CPSF310083.187MGP_SPRETEiJ_G0018481Cpsf310083.187Mus_spretus
ENSEEUG00000015422CPSF310083.333ENSMPUG00000013213CPSF310083.333Mustela_putorius_furo
ENSEEUG00000015422CPSF310082.920ENSMLUG00000010636CPSF310082.920Myotis_lucifugus
ENSEEUG00000015422CPSF310083.480ENSNGAG00000019836Cpsf310083.480Nannospalax_galili
ENSEEUG00000015422CPSF39970.631ENSNBRG00000004770cpsf39970.631Neolamprologus_brichardi
ENSEEUG00000015422CPSF39270.000ENSNBRG00000010525CPSF39865.932Neolamprologus_brichardi
ENSEEUG00000015422CPSF310083.918ENSNLEG00000013359CPSF310083.918Nomascus_leucogenys
ENSEEUG00000015422CPSF37778.539ENSMEUG00000013117-7778.539Notamacropus_eugenii
ENSEEUG00000015422CPSF310074.269ENSOPRG00000008902CPSF310074.269Ochotona_princeps
ENSEEUG00000015422CPSF310081.871ENSODEG00000003129CPSF310081.871Octodon_degus
ENSEEUG00000015422CPSF39970.925ENSONIG00000018812cpsf39970.925Oreochromis_niloticus
ENSEEUG00000015422CPSF37885.206ENSOANG00000008577CPSF39585.206Ornithorhynchus_anatinus
ENSEEUG00000015422CPSF310083.626ENSOCUG00000003728CPSF310083.626Oryctolagus_cuniculus
ENSEEUG00000015422CPSF39969.310ENSORLG00000018854cpsf39969.310Oryzias_latipes
ENSEEUG00000015422CPSF39969.163ENSORLG00020013331cpsf39969.163Oryzias_latipes_hni
ENSEEUG00000015422CPSF39969.310ENSORLG00015011017cpsf39969.310Oryzias_latipes_hsok
ENSEEUG00000015422CPSF39969.457ENSOMEG00000010647cpsf39469.457Oryzias_melastigma
ENSEEUG00000015422CPSF310080.409ENSOGAG00000001680CPSF310080.409Otolemur_garnettii
ENSEEUG00000015422CPSF310084.064ENSOARG00000015073CPSF310084.064Ovis_aries
ENSEEUG00000015422CPSF310084.064ENSPPAG00000042457CPSF310084.064Pan_paniscus
ENSEEUG00000015422CPSF310083.772ENSPPRG00000016790CPSF310083.772Panthera_pardus
ENSEEUG00000015422CPSF39983.676ENSPTIG00000003920CPSF39983.676Panthera_tigris_altaica
ENSEEUG00000015422CPSF310084.064ENSPTRG00000011638CPSF310084.064Pan_troglodytes
ENSEEUG00000015422CPSF310083.918ENSPANG00000016798CPSF310083.918Papio_anubis
ENSEEUG00000015422CPSF39974.559ENSPKIG00000023646cpsf39874.559Paramormyrops_kingsleyae
ENSEEUG00000015422CPSF39978.917ENSPSIG00000016144CPSF310078.917Pelodiscus_sinensis
ENSEEUG00000015422CPSF35966.667ENSPMGG00000015311CPSF39966.667Periophthalmus_magnuspinnatus
ENSEEUG00000015422CPSF38070.109ENSPMGG00000006141-9570.109Periophthalmus_magnuspinnatus
ENSEEUG00000015422CPSF310083.187ENSPEMG00000017668Cpsf310083.187Peromyscus_maniculatus_bairdii
ENSEEUG00000015422CPSF37872.439ENSPMAG00000004841cpsf39972.439Petromyzon_marinus
ENSEEUG00000015422CPSF39881.859ENSPCIG00000009823CPSF39881.859Phascolarctos_cinereus
ENSEEUG00000015422CPSF39970.235ENSPFOG00000015922cpsf39970.235Poecilia_formosa
ENSEEUG00000015422CPSF39972.754ENSPFOG00000010418-9872.754Poecilia_formosa
ENSEEUG00000015422CPSF35967.822ENSPLAG00000021300-9967.822Poecilia_latipinna
ENSEEUG00000015422CPSF39970.235ENSPLAG00000000882cpsf39970.235Poecilia_latipinna
ENSEEUG00000015422CPSF39970.235ENSPMEG00000018309cpsf39970.235Poecilia_mexicana
ENSEEUG00000015422CPSF39967.206ENSPREG00000004482CPSF39867.206Poecilia_reticulata
ENSEEUG00000015422CPSF39962.958ENSPREG00000014875cpsf39962.958Poecilia_reticulata
ENSEEUG00000015422CPSF310079.532ENSPPYG00000012666CPSF310079.532Pongo_abelii
ENSEEUG00000015422CPSF39562.980ENSPCAG00000015042CPSF310062.980Procavia_capensis
ENSEEUG00000015422CPSF38176.296ENSPCOG00000023016CPSF38976.296Propithecus_coquereli
ENSEEUG00000015422CPSF39984.164ENSPVAG00000005324CPSF39984.164Pteropus_vampyrus
ENSEEUG00000015422CPSF39970.778ENSPNYG00000004405cpsf39970.778Pundamilia_nyererei
ENSEEUG00000015422CPSF37972.928ENSPNYG00000021047CPSF39068.013Pundamilia_nyererei
ENSEEUG00000015422CPSF39972.353ENSPNAG00000023060cpsf39872.353Pygocentrus_nattereri
ENSEEUG00000015422CPSF39983.138ENSRNOG00000052418Cpsf39983.138Rattus_norvegicus
ENSEEUG00000015422CPSF310078.216ENSRBIG00000041615CPSF310078.216Rhinopithecus_bieti
ENSEEUG00000015422CPSF310084.064ENSRROG00000033792CPSF310084.064Rhinopithecus_roxellana
ENSEEUG00000015422CPSF38648.343YLR277CYSH18948.343Saccharomyces_cerevisiae
ENSEEUG00000015422CPSF310077.971ENSSBOG00000027263CPSF310077.971Saimiri_boliviensis_boliviensis
ENSEEUG00000015422CPSF310082.456ENSSHAG00000007024CPSF310082.456Sarcophilus_harrisii
ENSEEUG00000015422CPSF39974.596ENSSFOG00015002108cpsf39974.596Scleropages_formosus
ENSEEUG00000015422CPSF39571.914ENSSMAG00000020534CPSF39571.914Scophthalmus_maximus
ENSEEUG00000015422CPSF39972.941ENSSDUG00000018498CPSF39872.941Seriola_dumerili
ENSEEUG00000015422CPSF39971.512ENSSDUG00000002828cpsf39671.512Seriola_dumerili
ENSEEUG00000015422CPSF39972.941ENSSLDG00000005234CPSF39872.941Seriola_lalandi_dorsalis
ENSEEUG00000015422CPSF39971.512ENSSLDG00000008469cpsf39671.512Seriola_lalandi_dorsalis
ENSEEUG00000015422CPSF310077.339ENSSARG00000005186CPSF310077.339Sorex_araneus
ENSEEUG00000015422CPSF39877.049ENSSPUG00000015525CPSF39777.049Sphenodon_punctatus
ENSEEUG00000015422CPSF39972.647ENSSPAG00000002906CPSF39872.647Stegastes_partitus
ENSEEUG00000015422CPSF39970.882ENSSPAG00000018579cpsf39870.882Stegastes_partitus
ENSEEUG00000015422CPSF39983.895ENSSSCG00000020799CPSF39983.895Sus_scrofa
ENSEEUG00000015422CPSF39980.029ENSTGUG00000013016CPSF39980.029Taeniopygia_guttata
ENSEEUG00000015422CPSF35961.179ENSTRUG00000013905CPSF39961.179Takifugu_rubripes
ENSEEUG00000015422CPSF39970.588ENSTRUG00000007030cpsf39770.588Takifugu_rubripes
ENSEEUG00000015422CPSF38590.137ENSTBEG00000002707CPSF38590.137Tupaia_belangeri
ENSEEUG00000015422CPSF37496.237ENSTTRG00000000861CPSF37496.237Tursiops_truncatus
ENSEEUG00000015422CPSF39683.409ENSUAMG00000007535CPSF39483.409Ursus_americanus
ENSEEUG00000015422CPSF39583.153ENSUMAG00000003676CPSF310083.153Ursus_maritimus
ENSEEUG00000015422CPSF39379.180ENSVPAG00000008041CPSF310079.180Vicugna_pacos
ENSEEUG00000015422CPSF310084.064ENSVVUG00000002194CPSF310084.064Vulpes_vulpes
ENSEEUG00000015422CPSF39975.330ENSXETG00000008263cpsf39875.330Xenopus_tropicalis
ENSEEUG00000015422CPSF35464.960ENSXCOG00000000957-8764.960Xiphophorus_couchianus
ENSEEUG00000015422CPSF39970.381ENSXCOG00000019695cpsf39970.381Xiphophorus_couchianus
ENSEEUG00000015422CPSF39970.088ENSXMAG00000009784cpsf39970.088Xiphophorus_maculatus
ENSEEUG00000015422CPSF39283.978ENSXMAG00000027291CPSF39872.754Xiphophorus_maculatus

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