EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000015437 (Gene tree)
Gene ID: -
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 105059 bases
Position: chrGeneScaffold_6728:4949-110007
Accession: 21368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000014094	zf-U11-48K	PF05253.12	1.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000015441	SNRNP48-201	1017	-	ENSEEUP00000014094	339 (aa)	-	UPI0000F63D13

Gene Model

Click here to download ENSEEUG00000015437's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000015437's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000015437	SNRNP48	99	70.294	ENSG00000168566	SNRNP48	100	70.588	Homo_sapiens
ENSEEUG00000015437	SNRNP48	98	30.523	ENSAPOG00000021430	snrnp48	98	31.445	Acanthochromis_polyacanthus
ENSEEUG00000015437	SNRNP48	99	67.529	ENSAMEG00000017349	SNRNP48	100	67.816	Ailuropoda_melanoleuca
ENSEEUG00000015437	SNRNP48	88	30.769	ENSACIG00000002032	snrnp48	82	30.282	Amphilophus_citrinellus
ENSEEUG00000015437	SNRNP48	81	31.408	ENSAOCG00000010562	snrnp48	96	30.523	Amphiprion_ocellaris
ENSEEUG00000015437	SNRNP48	81	31.338	ENSAPEG00000003231	snrnp48	96	30.409	Amphiprion_percula
ENSEEUG00000015437	SNRNP48	71	33.333	ENSATEG00000020210	snrnp48	81	33.452	Anabas_testudineus
ENSEEUG00000015437	SNRNP48	83	46.575	ENSACAG00000002811	SNRNP48	90	46.575	Anolis_carolinensis
ENSEEUG00000015437	SNRNP48	99	70.588	ENSANAG00000033538	SNRNP48	100	70.882	Aotus_nancymaae
ENSEEUG00000015437	SNRNP48	95	30.887	ENSAMXG00000015309	snrnp48	97	31.471	Astyanax_mexicanus
ENSEEUG00000015437	SNRNP48	99	66.276	ENSBTAG00000001123	SNRNP48	100	67.449	Bos_taurus
ENSEEUG00000015437	SNRNP48	99	70.000	ENSCJAG00000021330	SNRNP48	100	70.294	Callithrix_jacchus
ENSEEUG00000015437	SNRNP48	99	67.953	ENSCAFG00000009574	SNRNP48	83	68.437	Canis_familiaris
ENSEEUG00000015437	SNRNP48	99	68.437	ENSCAFG00020013203	SNRNP48	99	68.732	Canis_lupus_dingo
ENSEEUG00000015437	SNRNP48	99	66.569	ENSCHIG00000015216	SNRNP48	100	67.742	Capra_hircus
ENSEEUG00000015437	SNRNP48	99	68.824	ENSTSYG00000000698	SNRNP48	100	69.118	Carlito_syrichta
ENSEEUG00000015437	SNRNP48	90	61.564	ENSCAPG00000006768	SNRNP48	99	61.564	Cavia_aperea
ENSEEUG00000015437	SNRNP48	99	65.882	ENSCPOG00000007910	SNRNP48	100	65.882	Cavia_porcellus
ENSEEUG00000015437	SNRNP48	99	69.706	ENSCCAG00000035652	SNRNP48	100	70.000	Cebus_capucinus
ENSEEUG00000015437	SNRNP48	99	69.706	ENSCATG00000033947	SNRNP48	100	70.000	Cercocebus_atys
ENSEEUG00000015437	SNRNP48	99	65.000	ENSCLAG00000003765	SNRNP48	100	67.647	Chinchilla_lanigera
ENSEEUG00000015437	SNRNP48	99	70.294	ENSCSAG00000007409	SNRNP48	100	70.588	Chlorocebus_sabaeus
ENSEEUG00000015437	SNRNP48	84	46.865	ENSCPBG00000019146	SNRNP48	92	46.865	Chrysemys_picta_bellii
ENSEEUG00000015437	SNRNP48	99	70.882	ENSCANG00000030017	SNRNP48	100	71.176	Colobus_angolensis_palliatus
ENSEEUG00000015437	SNRNP48	99	51.796	ENSCGRG00001008805	-	95	50.599	Cricetulus_griseus_chok1gshd
ENSEEUG00000015437	SNRNP48	99	66.962	ENSCGRG00001001076	-	100	66.962	Cricetulus_griseus_chok1gshd
ENSEEUG00000015437	SNRNP48	99	66.962	ENSCGRG00000007781	Snrnp48	100	66.962	Cricetulus_griseus_crigri
ENSEEUG00000015437	SNRNP48	76	31.395	ENSCSEG00000000722	snrnp48	71	32.946	Cynoglossus_semilaevis
ENSEEUG00000015437	SNRNP48	81	31.690	ENSDARG00000039989	snrnp48	83	31.724	Danio_rerio
ENSEEUG00000015437	SNRNP48	99	66.862	ENSDNOG00000014978	SNRNP48	100	68.622	Dasypus_novemcinctus
ENSEEUG00000015437	SNRNP48	99	66.862	ENSDORG00000015140	Snrnp48	100	76.238	Dipodomys_ordii
ENSEEUG00000015437	SNRNP48	99	70.294	ENSEASG00005012021	SNRNP48	100	70.588	Equus_asinus_asinus
ENSEEUG00000015437	SNRNP48	99	70.882	ENSECAG00000026937	SNRNP48	100	71.176	Equus_caballus
ENSEEUG00000015437	SNRNP48	90	33.333	ENSELUG00000009766	snrnp48	80	33.447	Esox_lucius
ENSEEUG00000015437	SNRNP48	99	70.000	ENSFCAG00000018853	SNRNP48	100	70.294	Felis_catus
ENSEEUG00000015437	SNRNP48	83	46.599	ENSFALG00000007797	SNRNP48	98	45.511	Ficedula_albicollis
ENSEEUG00000015437	SNRNP48	99	65.882	ENSFDAG00000009231	SNRNP48	100	65.882	Fukomys_damarensis
ENSEEUG00000015437	SNRNP48	59	33.990	ENSFHEG00000014647	snrnp48	82	32.636	Fundulus_heteroclitus
ENSEEUG00000015437	SNRNP48	72	32.114	ENSGMOG00000018599	-	77	32.157	Gadus_morhua
ENSEEUG00000015437	SNRNP48	81	45.804	ENSGALG00000013005	SNRNP48	92	46.886	Gallus_gallus
ENSEEUG00000015437	SNRNP48	82	32.975	ENSGAFG00000021639	snrnp48	93	31.343	Gambusia_affinis
ENSEEUG00000015437	SNRNP48	71	32.510	ENSGACG00000017756	-	84	31.944	Gasterosteus_aculeatus
ENSEEUG00000015437	SNRNP48	84	46.179	ENSGAGG00000000865	SNRNP48	97	46.179	Gopherus_agassizii
ENSEEUG00000015437	SNRNP48	99	70.588	ENSGGOG00000013220	SNRNP48	100	70.882	Gorilla_gorilla
ENSEEUG00000015437	SNRNP48	99	67.353	ENSHGLG00000015241	SNRNP48	100	67.647	Heterocephalus_glaber_female
ENSEEUG00000015437	SNRNP48	99	67.353	ENSHGLG00100010027	SNRNP48	100	67.647	Heterocephalus_glaber_male
ENSEEUG00000015437	SNRNP48	99	69.412	ENSSTOG00000014635	SNRNP48	100	82.178	Ictidomys_tridecemlineatus
ENSEEUG00000015437	SNRNP48	99	62.647	ENSJJAG00000011495	Snrnp48	100	72.277	Jaculus_jaculus
ENSEEUG00000015437	SNRNP48	75	32.422	ENSLBEG00000026249	snrnp48	95	30.882	Labrus_bergylta
ENSEEUG00000015437	SNRNP48	96	41.141	ENSLACG00000003958	SNRNP48	98	40.351	Latimeria_chalumnae
ENSEEUG00000015437	SNRNP48	83	34.483	ENSLOCG00000004187	snrnp48	95	34.218	Lepisosteus_oculatus
ENSEEUG00000015437	SNRNP48	98	66.866	ENSLAFG00000011152	SNRNP48	99	68.358	Loxodonta_africana
ENSEEUG00000015437	SNRNP48	99	70.588	ENSMFAG00000045216	SNRNP48	100	70.882	Macaca_fascicularis
ENSEEUG00000015437	SNRNP48	99	70.588	ENSMMUG00000014785	SNRNP48	100	70.882	Macaca_mulatta
ENSEEUG00000015437	SNRNP48	99	70.882	ENSMNEG00000042269	SNRNP48	100	71.176	Macaca_nemestrina
ENSEEUG00000015437	SNRNP48	99	70.588	ENSMLEG00000034004	SNRNP48	100	70.882	Mandrillus_leucophaeus
ENSEEUG00000015437	SNRNP48	75	32.031	ENSMAMG00000018673	snrnp48	71	31.915	Mastacembelus_armatus
ENSEEUG00000015437	SNRNP48	82	47.440	ENSMGAG00000006037	SNRNP48	99	47.782	Meleagris_gallopavo
ENSEEUG00000015437	SNRNP48	99	67.160	ENSMAUG00000011944	Snrnp48	100	78.788	Mesocricetus_auratus
ENSEEUG00000015437	SNRNP48	99	69.118	ENSMICG00000012497	SNRNP48	100	69.412	Microcebus_murinus
ENSEEUG00000015437	SNRNP48	99	66.272	ENSMOCG00000015555	Snrnp48	100	78.788	Microtus_ochrogaster
ENSEEUG00000015437	SNRNP48	98	54.493	ENSMODG00000009996	SNRNP48	93	54.493	Monodelphis_domestica
ENSEEUG00000015437	SNRNP48	75	33.333	ENSMALG00000005725	snrnp48	73	32.549	Monopterus_albus
ENSEEUG00000015437	SNRNP48	99	66.667	MGP_CAROLIEiJ_G0018441	Snrnp48	100	80.000	Mus_caroli
ENSEEUG00000015437	SNRNP48	99	65.782	ENSMUSG00000021431	Snrnp48	100	78.000	Mus_musculus
ENSEEUG00000015437	SNRNP48	99	66.077	MGP_PahariEiJ_G0019509	Snrnp48	100	66.077	Mus_pahari
ENSEEUG00000015437	SNRNP48	99	65.782	MGP_SPRETEiJ_G0019321	Snrnp48	100	77.000	Mus_spretus
ENSEEUG00000015437	SNRNP48	99	66.372	ENSNGAG00000004849	Snrnp48	99	79.000	Nannospalax_galili
ENSEEUG00000015437	SNRNP48	99	70.588	ENSNLEG00000011667	SNRNP48	100	70.882	Nomascus_leucogenys
ENSEEUG00000015437	SNRNP48	95	60.802	ENSOPRG00000015471	SNRNP48	97	60.828	Ochotona_princeps
ENSEEUG00000015437	SNRNP48	57	54.808	ENSOANG00000019888	-	100	55.769	Ornithorhynchus_anatinus
ENSEEUG00000015437	SNRNP48	90	68.852	ENSOCUG00000005168	SNRNP48	100	68.852	Oryctolagus_cuniculus
ENSEEUG00000015437	SNRNP48	97	30.294	ENSORLG00000015654	snrnp48	96	31.884	Oryzias_latipes
ENSEEUG00000015437	SNRNP48	88	32.362	ENSORLG00020015976	snrnp48	82	32.174	Oryzias_latipes_hni
ENSEEUG00000015437	SNRNP48	97	32.059	ENSORLG00015022379	snrnp48	82	33.043	Oryzias_latipes_hsok
ENSEEUG00000015437	SNRNP48	83	33.218	ENSOMEG00000022007	snrnp48	82	33.218	Oryzias_melastigma
ENSEEUG00000015437	SNRNP48	90	67.752	ENSOGAG00000005275	SNRNP48	93	67.752	Otolemur_garnettii
ENSEEUG00000015437	SNRNP48	84	64.931	ENSOARG00000017319	SNRNP48	100	64.931	Ovis_aries
ENSEEUG00000015437	SNRNP48	99	70.588	ENSPPAG00000032873	SNRNP48	100	70.882	Pan_paniscus
ENSEEUG00000015437	SNRNP48	99	70.294	ENSPPRG00000004283	SNRNP48	100	70.588	Panthera_pardus
ENSEEUG00000015437	SNRNP48	84	68.056	ENSPTIG00000013502	SNRNP48	100	68.403	Panthera_tigris_altaica
ENSEEUG00000015437	SNRNP48	99	70.588	ENSPTRG00000017703	SNRNP48	100	70.882	Pan_troglodytes
ENSEEUG00000015437	SNRNP48	99	70.588	ENSPANG00000000771	SNRNP48	100	70.882	Papio_anubis
ENSEEUG00000015437	SNRNP48	94	34.111	ENSPKIG00000013703	snrnp48	59	34.859	Paramormyrops_kingsleyae
ENSEEUG00000015437	SNRNP48	84	46.026	ENSPSIG00000002213	SNRNP48	94	46.689	Pelodiscus_sinensis
ENSEEUG00000015437	SNRNP48	72	32.932	ENSPMGG00000008120	snrnp48	86	32.932	Periophthalmus_magnuspinnatus
ENSEEUG00000015437	SNRNP48	99	66.962	ENSPEMG00000008872	Snrnp48	100	80.412	Peromyscus_maniculatus_bairdii
ENSEEUG00000015437	SNRNP48	79	35.055	ENSPFOG00000003578	snrnp48	93	31.642	Poecilia_formosa
ENSEEUG00000015437	SNRNP48	55	40.741	ENSPLAG00000002290	snrnp48	63	40.741	Poecilia_latipinna
ENSEEUG00000015437	SNRNP48	79	34.317	ENSPMEG00000018033	snrnp48	93	31.045	Poecilia_mexicana
ENSEEUG00000015437	SNRNP48	72	34.413	ENSPREG00000018541	snrnp48	93	32.239	Poecilia_reticulata
ENSEEUG00000015437	SNRNP48	99	69.706	ENSPPYG00000016209	SNRNP48	100	70.000	Pongo_abelii
ENSEEUG00000015437	SNRNP48	77	70.992	ENSPCAG00000011991	SNRNP48	97	70.992	Procavia_capensis
ENSEEUG00000015437	SNRNP48	99	69.412	ENSPVAG00000002854	SNRNP48	100	69.706	Pteropus_vampyrus
ENSEEUG00000015437	SNRNP48	76	30.916	ENSPNYG00000015399	snrnp48	86	30.943	Pundamilia_nyererei
ENSEEUG00000015437	SNRNP48	99	66.667	ENSRNOG00000013756	Snrnp48	100	66.667	Rattus_norvegicus
ENSEEUG00000015437	SNRNP48	91	69.132	ENSRBIG00000043856	SNRNP48	97	69.481	Rhinopithecus_bieti
ENSEEUG00000015437	SNRNP48	99	70.588	ENSRROG00000043229	SNRNP48	100	70.882	Rhinopithecus_roxellana
ENSEEUG00000015437	SNRNP48	99	70.294	ENSSBOG00000019486	SNRNP48	100	70.588	Saimiri_boliviensis_boliviensis
ENSEEUG00000015437	SNRNP48	97	54.203	ENSSHAG00000014483	SNRNP48	99	54.203	Sarcophilus_harrisii
ENSEEUG00000015437	SNRNP48	74	33.992	ENSSFOG00015006610	snrnp48	70	34.122	Scleropages_formosus
ENSEEUG00000015437	SNRNP48	85	32.180	ENSSDUG00000014953	snrnp48	92	30.303	Seriola_dumerili
ENSEEUG00000015437	SNRNP48	84	31.944	ENSSLDG00000005989	snrnp48	92	31.003	Seriola_lalandi_dorsalis
ENSEEUG00000015437	SNRNP48	84	46.154	ENSSPUG00000006257	SNRNP48	85	46.154	Sphenodon_punctatus
ENSEEUG00000015437	SNRNP48	81	30.797	ENSSPAG00000006454	snrnp48	80	31.673	Stegastes_partitus
ENSEEUG00000015437	SNRNP48	83	47.782	ENSTGUG00000007575	SNRNP48	93	47.782	Taeniopygia_guttata
ENSEEUG00000015437	SNRNP48	71	34.426	ENSTRUG00000007031	snrnp48	80	33.455	Takifugu_rubripes
ENSEEUG00000015437	SNRNP48	79	63.806	ENSTBEG00000015620	SNRNP48	79	63.806	Tupaia_belangeri
ENSEEUG00000015437	SNRNP48	99	68.824	ENSTTRG00000016715	SNRNP48	100	68.824	Tursiops_truncatus
ENSEEUG00000015437	SNRNP48	99	66.471	ENSUAMG00000003690	SNRNP48	100	79.208	Ursus_americanus
ENSEEUG00000015437	SNRNP48	84	63.194	ENSVPAG00000003557	SNRNP48	100	62.847	Vicugna_pacos
ENSEEUG00000015437	SNRNP48	99	68.142	ENSVVUG00000004996	SNRNP48	99	68.437	Vulpes_vulpes
ENSEEUG00000015437	SNRNP48	86	35.786	ENSXETG00000020447	snrnp48	97	35.417	Xenopus_tropicalis
ENSEEUG00000015437	SNRNP48	55	39.153	ENSXCOG00000004478	snrnp48	56	39.153	Xiphophorus_couchianus
ENSEEUG00000015437	SNRNP48	79	33.948	ENSXMAG00000013595	snrnp48	93	31.343	Xiphophorus_maculatus