EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000015466 (Gene tree)
Gene ID: -
Gene Symbol: YTHDC1
Alias: -
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 30570 bases
Position: chrscaffold_344295:1066-31635
Accession: 103119980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000014126	YTH	PF04146.15	5.3e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000015479	YTHDC1-201	2187	-	ENSEEUP00000014126	728 (aa)	XP_007530393	A0A1S3A757

Gene Model

Click here to download ENSEEUG00000015466's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000015466's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000015466	YTHDC1	100	96.708	ENSG00000083896	YTHDC1	100	96.708	Homo_sapiens
ENSEEUG00000015466	YTHDC1	57	58.554	ENSAPOG00000013997	ythdc1	57	62.500	Acanthochromis_polyacanthus
ENSEEUG00000015466	YTHDC1	100	96.438	ENSAMEG00000005688	YTHDC1	100	96.438	Ailuropoda_melanoleuca
ENSEEUG00000015466	YTHDC1	71	57.554	ENSACIG00000019728	ythdc1	83	59.286	Amphilophus_citrinellus
ENSEEUG00000015466	YTHDC1	57	61.927	ENSAOCG00000000239	ythdc1	59	66.515	Amphiprion_ocellaris
ENSEEUG00000015466	YTHDC1	91	83.158	ENSAPLG00000009921	YTHDC1	60	95.465	Anas_platyrhynchos
ENSEEUG00000015466	YTHDC1	93	83.111	ENSACAG00000009697	YTHDC1	93	82.370	Anolis_carolinensis
ENSEEUG00000015466	YTHDC1	100	96.159	ENSANAG00000001522	YTHDC1	100	96.159	Aotus_nancymaae
ENSEEUG00000015466	YTHDC1	57	59.404	ENSACLG00000019371	ythdc1	59	65.148	Astatotilapia_calliptera
ENSEEUG00000015466	YTHDC1	93	63.833	ENSAMXG00000006978	ythdc1	58	78.886	Astyanax_mexicanus
ENSEEUG00000015466	YTHDC1	100	96.703	ENSBTAG00000015572	YTHDC1	100	96.703	Bos_taurus
ENSEEUG00000015466	YTHDC1	100	96.571	ENSCJAG00000009934	YTHDC1	100	96.571	Callithrix_jacchus
ENSEEUG00000015466	YTHDC1	100	96.301	ENSCAFG00000002821	YTHDC1	100	96.301	Canis_familiaris
ENSEEUG00000015466	YTHDC1	100	96.301	ENSCAFG00020027112	YTHDC1	100	96.301	Canis_lupus_dingo
ENSEEUG00000015466	YTHDC1	91	88.262	ENSCHIG00000004810	YTHDC1	95	90.684	Capra_hircus
ENSEEUG00000015466	YTHDC1	100	96.571	ENSTSYG00000011668	YTHDC1	100	96.571	Carlito_syrichta
ENSEEUG00000015466	YTHDC1	90	65.653	ENSCAPG00000008722	YTHDC1	90	65.465	Cavia_aperea
ENSEEUG00000015466	YTHDC1	93	86.053	ENSCPOG00000010929	YTHDC1	92	85.460	Cavia_porcellus
ENSEEUG00000015466	YTHDC1	100	96.433	ENSCCAG00000035754	YTHDC1	100	96.433	Cebus_capucinus
ENSEEUG00000015466	YTHDC1	100	95.658	ENSCATG00000036320	YTHDC1	100	95.658	Cercocebus_atys
ENSEEUG00000015466	YTHDC1	91	92.262	ENSCLAG00000005482	YTHDC1	92	91.518	Chinchilla_lanigera
ENSEEUG00000015466	YTHDC1	100	96.708	ENSCSAG00000005252	YTHDC1	100	96.708	Chlorocebus_sabaeus
ENSEEUG00000015466	YTHDC1	92	85.417	ENSCPBG00000021965	YTHDC1	63	95.704	Chrysemys_picta_bellii
ENSEEUG00000015466	YTHDC1	100	96.845	ENSCANG00000004769	YTHDC1	100	96.845	Colobus_angolensis_palliatus
ENSEEUG00000015466	YTHDC1	93	92.229	ENSCGRG00001000816	Ythdc1	93	91.642	Cricetulus_griseus_chok1gshd
ENSEEUG00000015466	YTHDC1	91	93.233	ENSCGRG00000009807	Ythdc1	92	92.632	Cricetulus_griseus_crigri
ENSEEUG00000015466	YTHDC1	57	60.352	ENSCSEG00000020404	ythdc1	59	65.525	Cynoglossus_semilaevis
ENSEEUG00000015466	YTHDC1	57	60.227	ENSCVAG00000022349	ythdc1	59	65.596	Cyprinodon_variegatus
ENSEEUG00000015466	YTHDC1	93	62.791	ENSDARG00000051953	ythdc1	58	77.647	Danio_rerio
ENSEEUG00000015466	YTHDC1	100	95.068	ENSDNOG00000004949	YTHDC1	100	95.068	Dasypus_novemcinctus
ENSEEUG00000015466	YTHDC1	99	96.100	ENSDORG00000013045	Ythdc1	100	96.100	Dipodomys_ordii
ENSEEUG00000015466	YTHDC1	78	97.468	ENSETEG00000001878	YTHDC1	70	97.758	Echinops_telfairi
ENSEEUG00000015466	YTHDC1	100	96.986	ENSEASG00005018383	YTHDC1	100	96.986	Equus_asinus_asinus
ENSEEUG00000015466	YTHDC1	100	96.438	ENSECAG00000018303	YTHDC1	100	96.438	Equus_caballus
ENSEEUG00000015466	YTHDC1	93	61.103	ENSELUG00000014029	ythdc1	57	75.490	Esox_lucius
ENSEEUG00000015466	YTHDC1	100	96.296	ENSFCAG00000026791	YTHDC1	100	96.296	Felis_catus
ENSEEUG00000015466	YTHDC1	69	87.927	ENSFALG00000006581	YTHDC1	87	95.918	Ficedula_albicollis
ENSEEUG00000015466	YTHDC1	99	95.967	ENSFDAG00000018560	YTHDC1	100	95.967	Fukomys_damarensis
ENSEEUG00000015466	YTHDC1	65	58.730	ENSFHEG00000001286	ythdc1	60	54.655	Fundulus_heteroclitus
ENSEEUG00000015466	YTHDC1	63	63.830	ENSGMOG00000018815	ythdc1	78	62.500	Gadus_morhua
ENSEEUG00000015466	YTHDC1	92	84.054	ENSGALG00000035906	YTHDC1	56	95.227	Gallus_gallus
ENSEEUG00000015466	YTHDC1	53	66.058	ENSGAFG00000001759	ythdc1	80	67.029	Gambusia_affinis
ENSEEUG00000015466	YTHDC1	57	62.850	ENSGACG00000015486	ythdc1	57	62.238	Gasterosteus_aculeatus
ENSEEUG00000015466	YTHDC1	93	84.187	ENSGAGG00000007108	YTHDC1	60	93.677	Gopherus_agassizii
ENSEEUG00000015466	YTHDC1	100	95.658	ENSGGOG00000021958	YTHDC1	100	95.658	Gorilla_gorilla
ENSEEUG00000015466	YTHDC1	57	59.404	ENSHBUG00000019288	ythdc1	59	65.148	Haplochromis_burtoni
ENSEEUG00000015466	YTHDC1	93	91.935	ENSHGLG00000006319	-	93	91.789	Heterocephalus_glaber_female
ENSEEUG00000015466	YTHDC1	94	70.262	ENSHGLG00000003239	-	86	71.300	Heterocephalus_glaber_female
ENSEEUG00000015466	YTHDC1	93	92.035	ENSHGLG00100001556	-	93	91.888	Heterocephalus_glaber_male
ENSEEUG00000015466	YTHDC1	94	68.795	ENSHGLG00100008060	-	57	74.822	Heterocephalus_glaber_male
ENSEEUG00000015466	YTHDC1	69	68.085	ENSHCOG00000001520	ythdc1	84	68.085	Hippocampus_comes
ENSEEUG00000015466	YTHDC1	93	67.006	ENSIPUG00000018136	ythdc1	61	83.295	Ictalurus_punctatus
ENSEEUG00000015466	YTHDC1	100	95.387	ENSSTOG00000013652	YTHDC1	100	95.387	Ictidomys_tridecemlineatus
ENSEEUG00000015466	YTHDC1	91	89.004	ENSJJAG00000010268	Ythdc1	93	89.450	Jaculus_jaculus
ENSEEUG00000015466	YTHDC1	57	60.274	ENSKMAG00000006483	ythdc1	85	64.853	Kryptolebias_marmoratus
ENSEEUG00000015466	YTHDC1	64	63.462	ENSLBEG00000020831	ythdc1	74	63.462	Labrus_bergylta
ENSEEUG00000015466	YTHDC1	87	72.841	ENSLACG00000004893	YTHDC1	62	88.208	Latimeria_chalumnae
ENSEEUG00000015466	YTHDC1	93	72.419	ENSLOCG00000003045	ythdc1	89	87.981	Lepisosteus_oculatus
ENSEEUG00000015466	YTHDC1	93	91.642	ENSLAFG00000021592	YTHDC1	93	90.762	Loxodonta_africana
ENSEEUG00000015466	YTHDC1	100	95.794	ENSMFAG00000031927	YTHDC1	100	95.794	Macaca_fascicularis
ENSEEUG00000015466	YTHDC1	100	96.845	ENSMMUG00000002265	YTHDC1	100	96.845	Macaca_mulatta
ENSEEUG00000015466	YTHDC1	100	96.845	ENSMNEG00000033751	YTHDC1	100	96.845	Macaca_nemestrina
ENSEEUG00000015466	YTHDC1	100	96.708	ENSMLEG00000042147	YTHDC1	100	96.708	Mandrillus_leucophaeus
ENSEEUG00000015466	YTHDC1	57	59.404	ENSMZEG00005023173	ythdc1	59	65.148	Maylandia_zebra
ENSEEUG00000015466	YTHDC1	93	82.519	ENSMGAG00000010391	YTHDC1	59	95.227	Meleagris_gallopavo
ENSEEUG00000015466	YTHDC1	93	91.935	ENSMAUG00000001286	Ythdc1	93	91.349	Mesocricetus_auratus
ENSEEUG00000015466	YTHDC1	100	94.980	ENSMICG00000034640	YTHDC1	100	94.980	Microcebus_murinus
ENSEEUG00000015466	YTHDC1	93	92.375	ENSMOCG00000020201	Ythdc1	93	91.202	Microtus_ochrogaster
ENSEEUG00000015466	YTHDC1	96	51.213	ENSMODG00000010076	-	60	61.298	Monodelphis_domestica
ENSEEUG00000015466	YTHDC1	93	87.240	ENSMODG00000020754	-	92	87.834	Monodelphis_domestica
ENSEEUG00000015466	YTHDC1	87	69.476	ENSMODG00000014337	-	93	70.455	Monodelphis_domestica
ENSEEUG00000015466	YTHDC1	64	57.660	ENSMODG00000009173	-	88	61.353	Monodelphis_domestica
ENSEEUG00000015466	YTHDC1	50	67.116	ENSMALG00000013412	ythdc1	56	67.838	Monopterus_albus
ENSEEUG00000015466	YTHDC1	93	93.917	MGP_CAROLIEiJ_G0027347	Ythdc1	97	90.859	Mus_caroli
ENSEEUG00000015466	YTHDC1	93	92.593	ENSMUSG00000035851	Ythdc1	93	92.296	Mus_musculus
ENSEEUG00000015466	YTHDC1	93	92.889	MGP_PahariEiJ_G0017126	Ythdc1	93	92.741	Mus_pahari
ENSEEUG00000015466	YTHDC1	93	92.889	MGP_SPRETEiJ_G0028339	Ythdc1	93	92.593	Mus_spretus
ENSEEUG00000015466	YTHDC1	93	73.117	ENSMPUG00000001743	YTHDC1	53	98.172	Mustela_putorius_furo
ENSEEUG00000015466	YTHDC1	99	96.100	ENSMLUG00000016300	YTHDC1	100	96.100	Myotis_lucifugus
ENSEEUG00000015466	YTHDC1	60	86.105	ENSNGAG00000024000	Ythdc1	93	85.682	Nannospalax_galili
ENSEEUG00000015466	YTHDC1	57	59.485	ENSNBRG00000007663	ythdc1	70	65.349	Neolamprologus_brichardi
ENSEEUG00000015466	YTHDC1	91	94.354	ENSNLEG00000009202	YTHDC1	96	92.015	Nomascus_leucogenys
ENSEEUG00000015466	YTHDC1	80	80.936	ENSMEUG00000007128	YTHDC1	81	80.936	Notamacropus_eugenii
ENSEEUG00000015466	YTHDC1	73	98.017	ENSOPRG00000008986	YTHDC1	74	98.017	Ochotona_princeps
ENSEEUG00000015466	YTHDC1	93	92.582	ENSODEG00000001715	YTHDC1	93	94.214	Octodon_degus
ENSEEUG00000015466	YTHDC1	66	75.000	ENSONIG00000012651	ythdc1	67	68.941	Oreochromis_niloticus
ENSEEUG00000015466	YTHDC1	88	75.076	ENSOANG00000014398	YTHDC1	55	93.924	Ornithorhynchus_anatinus
ENSEEUG00000015466	YTHDC1	93	80.383	ENSOCUG00000015886	YTHDC1	56	94.444	Oryctolagus_cuniculus
ENSEEUG00000015466	YTHDC1	57	60.460	ENSOMEG00000000551	ythdc1	60	64.286	Oryzias_melastigma
ENSEEUG00000015466	YTHDC1	93	92.582	ENSOGAG00000003362	YTHDC1	93	91.988	Otolemur_garnettii
ENSEEUG00000015466	YTHDC1	100	96.703	ENSOARG00000008633	YTHDC1	100	96.703	Ovis_aries
ENSEEUG00000015466	YTHDC1	100	95.658	ENSPPAG00000041315	YTHDC1	100	95.658	Pan_paniscus
ENSEEUG00000015466	YTHDC1	100	95.387	ENSPPRG00000011979	YTHDC1	100	95.387	Panthera_pardus
ENSEEUG00000015466	YTHDC1	91	93.908	ENSPTIG00000015527	YTHDC1	93	94.502	Panthera_tigris_altaica
ENSEEUG00000015466	YTHDC1	100	95.658	ENSPTRG00000016105	YTHDC1	100	95.658	Pan_troglodytes
ENSEEUG00000015466	YTHDC1	100	95.658	ENSPANG00000021590	YTHDC1	100	95.658	Papio_anubis
ENSEEUG00000015466	YTHDC1	93	68.705	ENSPKIG00000018497	ythdc1	60	83.023	Paramormyrops_kingsleyae
ENSEEUG00000015466	YTHDC1	91	85.435	ENSPSIG00000002782	YTHDC1	60	95.465	Pelodiscus_sinensis
ENSEEUG00000015466	YTHDC1	91	92.922	ENSPEMG00000013850	Ythdc1	92	92.319	Peromyscus_maniculatus_bairdii
ENSEEUG00000015466	YTHDC1	93	87.092	ENSPCIG00000006870	YTHDC1	92	87.685	Phascolarctos_cinereus
ENSEEUG00000015466	YTHDC1	57	58.957	ENSPFOG00000013404	ythdc1	60	64.531	Poecilia_formosa
ENSEEUG00000015466	YTHDC1	57	58.628	ENSPLAG00000011079	ythdc1	85	64.531	Poecilia_latipinna
ENSEEUG00000015466	YTHDC1	57	58.957	ENSPMEG00000009238	ythdc1	60	64.531	Poecilia_mexicana
ENSEEUG00000015466	YTHDC1	71	59.135	ENSPREG00000016973	ythdc1	59	58.654	Poecilia_reticulata
ENSEEUG00000015466	YTHDC1	87	96.524	ENSPPYG00000014726	YTHDC1	100	96.524	Pongo_abelii
ENSEEUG00000015466	YTHDC1	77	88.182	ENSPCAG00000009607	YTHDC1	77	87.727	Procavia_capensis
ENSEEUG00000015466	YTHDC1	93	89.150	ENSPCOG00000019105	YTHDC1	92	87.390	Propithecus_coquereli
ENSEEUG00000015466	YTHDC1	93	93.353	ENSPVAG00000015551	YTHDC1	93	93.648	Pteropus_vampyrus
ENSEEUG00000015466	YTHDC1	57	59.404	ENSPNYG00000011687	ythdc1	59	65.148	Pundamilia_nyererei
ENSEEUG00000015466	YTHDC1	93	68.406	ENSPNAG00000028365	ythdc1	60	84.687	Pygocentrus_nattereri
ENSEEUG00000015466	YTHDC1	93	90.219	ENSRNOG00000001996	Ythdc1	93	90.949	Rattus_norvegicus
ENSEEUG00000015466	YTHDC1	99	94.643	ENSRBIG00000028279	YTHDC1	99	94.643	Rhinopithecus_bieti
ENSEEUG00000015466	YTHDC1	100	96.845	ENSRROG00000035028	YTHDC1	100	96.845	Rhinopithecus_roxellana
ENSEEUG00000015466	YTHDC1	100	95.522	ENSSBOG00000022353	YTHDC1	100	95.522	Saimiri_boliviensis_boliviensis
ENSEEUG00000015466	YTHDC1	93	86.053	ENSSHAG00000002538	YTHDC1	91	87.519	Sarcophilus_harrisii
ENSEEUG00000015466	YTHDC1	93	68.841	ENSSFOG00015003298	ythdc1	60	85.545	Scleropages_formosus
ENSEEUG00000015466	YTHDC1	56	60.314	ENSSMAG00000009086	ythdc1	60	64.840	Scophthalmus_maximus
ENSEEUG00000015466	YTHDC1	79	97.574	ENSSARG00000010960	YTHDC1	100	97.574	Sorex_araneus
ENSEEUG00000015466	YTHDC1	93	81.121	ENSSPUG00000009357	YTHDC1	62	94.774	Sphenodon_punctatus
ENSEEUG00000015466	YTHDC1	57	61.009	ENSSPAG00000011449	ythdc1	59	66.972	Stegastes_partitus
ENSEEUG00000015466	YTHDC1	100	95.135	ENSSSCG00000035505	YTHDC1	100	95.135	Sus_scrofa
ENSEEUG00000015466	YTHDC1	93	84.741	ENSTGUG00000004452	-	59	95.704	Taeniopygia_guttata
ENSEEUG00000015466	YTHDC1	63	61.224	ENSTRUG00000010142	ythdc1	69	70.000	Takifugu_rubripes
ENSEEUG00000015466	YTHDC1	86	59.870	ENSTNIG00000013243	ythdc1	85	65.116	Tetraodon_nigroviridis
ENSEEUG00000015466	YTHDC1	93	85.015	ENSTBEG00000011546	YTHDC1	92	85.460	Tupaia_belangeri
ENSEEUG00000015466	YTHDC1	100	95.890	ENSTTRG00000005083	YTHDC1	100	95.890	Tursiops_truncatus
ENSEEUG00000015466	YTHDC1	93	96.460	ENSUAMG00000010388	YTHDC1	100	96.460	Ursus_americanus
ENSEEUG00000015466	YTHDC1	99	82.615	ENSUMAG00000013668	YTHDC1	98	82.615	Ursus_maritimus
ENSEEUG00000015466	YTHDC1	100	94.643	ENSVPAG00000009040	YTHDC1	100	94.643	Vicugna_pacos
ENSEEUG00000015466	YTHDC1	99	95.336	ENSVVUG00000005387	YTHDC1	100	96.318	Vulpes_vulpes
ENSEEUG00000015466	YTHDC1	92	72.107	ENSXETG00000017960	ythdc1	91	71.513	Xenopus_tropicalis
ENSEEUG00000015466	YTHDC1	57	58.957	ENSXMAG00000005196	ythdc1	61	63.844	Xiphophorus_maculatus