EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEEUG00000015568 (Gene tree)
Gene ID: -
Gene Symbol: SNRPB
Alias: COD|SNRPB1|Sm-B/B'|SmB/SmB'|snRNP-B
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Minus strand
Length: 7754 bases
Position: chrGeneScaffold_3258:4872-12625
Accession: 11153
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000014212	LSM	PF01423.22	5.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000015571	SNRPB-201	855	-	ENSEEUP00000014212	284 (aa)	-	UPI0000F61578

Gene Model

Click here to download ENSEEUG00000015568's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000015568's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEEUG00000015568	SNRPB	77	91.818	ENSEEUG00000007440	-	92	91.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000015568	SNRPB	82	98.276	ENSG00000125835	SNRPB	98	100.000	Homo_sapiens
ENSEEUG00000015568	SNRPB	64	92.818	ENSAPOG00000019606	snrpb	56	94.643	Acanthochromis_polyacanthus
ENSEEUG00000015568	SNRPB	81	98.268	ENSAMEG00000011353	SNRPB	95	98.268	Ailuropoda_melanoleuca
ENSEEUG00000015568	SNRPB	62	92.000	ENSACIG00000014480	snrpb	71	94.444	Amphilophus_citrinellus
ENSEEUG00000015568	SNRPB	64	92.818	ENSAOCG00000006876	snrpb	69	94.643	Amphiprion_ocellaris
ENSEEUG00000015568	SNRPB	64	92.818	ENSAPEG00000021585	snrpb	71	94.643	Amphiprion_percula
ENSEEUG00000015568	SNRPB	64	92.265	ENSATEG00000009836	snrpb	69	94.048	Anabas_testudineus
ENSEEUG00000015568	SNRPB	75	95.305	ENSACAG00000002053	SNRPB	92	95.305	Anolis_carolinensis
ENSEEUG00000015568	SNRPB	76	93.488	ENSANAG00000036271	-	76	93.122	Aotus_nancymaae
ENSEEUG00000015568	SNRPB	82	98.276	ENSANAG00000024443	-	98	100.000	Aotus_nancymaae
ENSEEUG00000015568	SNRPB	64	92.818	ENSACLG00000014707	snrpb	69	94.643	Astatotilapia_calliptera
ENSEEUG00000015568	SNRPB	64	92.896	ENSAMXG00000029434	snrpb	70	94.048	Astyanax_mexicanus
ENSEEUG00000015568	SNRPB	80	99.558	ENSBTAG00000001038	SNRPB	98	99.558	Bos_taurus
ENSEEUG00000015568	SNRPB	80	100.000	ENSCJAG00000020971	-	98	100.000	Callithrix_jacchus
ENSEEUG00000015568	SNRPB	75	92.056	ENSCJAG00000023097	-	79	92.063	Callithrix_jacchus
ENSEEUG00000015568	SNRPB	66	88.421	ENSCAFG00000031109	-	79	84.737	Canis_familiaris
ENSEEUG00000015568	SNRPB	80	100.000	ENSCAFG00000006693	-	98	100.000	Canis_familiaris
ENSEEUG00000015568	SNRPB	82	98.276	ENSCAFG00020016981	-	97	98.276	Canis_lupus_dingo
ENSEEUG00000015568	SNRPB	80	99.558	ENSCHIG00000025449	-	98	99.558	Capra_hircus
ENSEEUG00000015568	SNRPB	80	100.000	ENSTSYG00000014498	-	98	100.000	Carlito_syrichta
ENSEEUG00000015568	SNRPB	82	75.214	ENSTSYG00000032303	-	55	80.405	Carlito_syrichta
ENSEEUG00000015568	SNRPB	81	98.268	ENSCAPG00000012669	SNRPB	98	100.000	Cavia_aperea
ENSEEUG00000015568	SNRPB	80	100.000	ENSCPOG00000039408	SNRPB	98	100.000	Cavia_porcellus
ENSEEUG00000015568	SNRPB	82	98.276	ENSCCAG00000026002	SNRPB	98	100.000	Cebus_capucinus
ENSEEUG00000015568	SNRPB	95	67.037	ENSCCAG00000035140	-	89	86.275	Cebus_capucinus
ENSEEUG00000015568	SNRPB	80	100.000	ENSCATG00000030230	SNRPB	98	100.000	Cercocebus_atys
ENSEEUG00000015568	SNRPB	80	100.000	ENSCLAG00000012442	SNRPB	95	100.000	Chinchilla_lanigera
ENSEEUG00000015568	SNRPB	80	100.000	ENSCSAG00000010840	SNRPB	98	100.000	Chlorocebus_sabaeus
ENSEEUG00000015568	SNRPB	80	96.460	ENSCPBG00000026801	SNRPB	98	96.460	Chrysemys_picta_bellii
ENSEEUG00000015568	SNRPB	82	98.276	ENSCANG00000019461	SNRPB	98	100.000	Colobus_angolensis_palliatus
ENSEEUG00000015568	SNRPB	80	100.000	ENSCGRG00001023046	Snrpb	98	100.000	Cricetulus_griseus_chok1gshd
ENSEEUG00000015568	SNRPB	77	100.000	ENSCGRG00000010423	Snrpb	97	100.000	Cricetulus_griseus_crigri
ENSEEUG00000015568	SNRPB	64	92.350	ENSCSEG00000020328	snrpb	70	94.643	Cynoglossus_semilaevis
ENSEEUG00000015568	SNRPB	59	92.857	ENSDARG00000011125	snrpb	69	94.643	Danio_rerio
ENSEEUG00000015568	SNRPB	82	98.276	ENSDNOG00000015545	-	97	98.276	Dasypus_novemcinctus
ENSEEUG00000015568	SNRPB	61	94.220	ENSDNOG00000007896	-	71	94.220	Dasypus_novemcinctus
ENSEEUG00000015568	SNRPB	80	97.788	ENSDORG00000029558	Snrpb	98	97.788	Dipodomys_ordii
ENSEEUG00000015568	SNRPB	52	70.470	FBgn0262601	SmB	74	70.470	Drosophila_melanogaster
ENSEEUG00000015568	SNRPB	64	78.689	ENSETEG00000006830	SNRPB	74	77.381	Echinops_telfairi
ENSEEUG00000015568	SNRPB	64	80.108	ENSEBUG00000007467	SNRPB	62	88.591	Eptatretus_burgeri
ENSEEUG00000015568	SNRPB	80	99.558	ENSEASG00005012991	SNRPB	98	99.558	Equus_asinus_asinus
ENSEEUG00000015568	SNRPB	83	97.021	ENSECAG00000011944	SNRPB	98	100.000	Equus_caballus
ENSEEUG00000015568	SNRPB	51	95.862	ENSELUG00000014564	snrpb	71	93.210	Esox_lucius
ENSEEUG00000015568	SNRPB	80	100.000	ENSFCAG00000034090	-	98	100.000	Felis_catus
ENSEEUG00000015568	SNRPB	75	95.775	ENSFALG00000004866	SNRPB	92	95.775	Ficedula_albicollis
ENSEEUG00000015568	SNRPB	80	100.000	ENSFDAG00000009937	SNRPB	98	100.000	Fukomys_damarensis
ENSEEUG00000015568	SNRPB	78	95.928	ENSGALG00000035421	SNRPN	100	87.795	Gallus_gallus
ENSEEUG00000015568	SNRPB	61	93.023	ENSGAFG00000019558	snrpb	72	94.012	Gambusia_affinis
ENSEEUG00000015568	SNRPB	64	91.257	ENSGACG00000003262	snrpb	70	94.643	Gasterosteus_aculeatus
ENSEEUG00000015568	SNRPB	78	96.380	ENSGAGG00000001308	SNRPB	100	88.189	Gopherus_agassizii
ENSEEUG00000015568	SNRPB	80	100.000	ENSGGOG00000016138	SNRPB	98	100.000	Gorilla_gorilla
ENSEEUG00000015568	SNRPB	64	92.818	ENSHBUG00000008369	snrpb	69	94.643	Haplochromis_burtoni
ENSEEUG00000015568	SNRPB	53	90.000	ENSHGLG00000016505	-	72	90.000	Heterocephalus_glaber_female
ENSEEUG00000015568	SNRPB	80	100.000	ENSHGLG00000016241	-	98	100.000	Heterocephalus_glaber_female
ENSEEUG00000015568	SNRPB	53	90.000	ENSHGLG00100004178	-	72	90.000	Heterocephalus_glaber_male
ENSEEUG00000015568	SNRPB	82	98.276	ENSHGLG00100012877	-	98	100.000	Heterocephalus_glaber_male
ENSEEUG00000015568	SNRPB	64	92.350	ENSHCOG00000014888	snrpb	70	94.643	Hippocampus_comes
ENSEEUG00000015568	SNRPB	59	92.857	ENSIPUG00000024569	SNRPB	70	94.643	Ictalurus_punctatus
ENSEEUG00000015568	SNRPB	76	81.944	ENSSTOG00000027821	-	62	99.265	Ictidomys_tridecemlineatus
ENSEEUG00000015568	SNRPB	74	98.104	ENSSTOG00000033664	-	72	98.266	Ictidomys_tridecemlineatus
ENSEEUG00000015568	SNRPB	80	100.000	ENSJJAG00000024170	Snrpb	98	100.000	Jaculus_jaculus
ENSEEUG00000015568	SNRPB	61	94.220	ENSKMAG00000014494	snrpb	68	95.238	Kryptolebias_marmoratus
ENSEEUG00000015568	SNRPB	64	92.350	ENSLBEG00000005678	snrpb	70	94.643	Labrus_bergylta
ENSEEUG00000015568	SNRPB	78	93.213	ENSLACG00000011459	SNRPB	100	85.433	Latimeria_chalumnae
ENSEEUG00000015568	SNRPB	59	94.048	ENSLOCG00000002687	snrpb	70	95.238	Lepisosteus_oculatus
ENSEEUG00000015568	SNRPB	79	96.000	ENSLAFG00000017588	SNRPB	97	96.000	Loxodonta_africana
ENSEEUG00000015568	SNRPB	80	100.000	ENSMFAG00000038756	SNRPB	98	100.000	Macaca_fascicularis
ENSEEUG00000015568	SNRPB	80	100.000	ENSMMUG00000010050	SNRPB	98	100.000	Macaca_mulatta
ENSEEUG00000015568	SNRPB	80	100.000	ENSMNEG00000027954	SNRPB	98	100.000	Macaca_nemestrina
ENSEEUG00000015568	SNRPB	82	98.276	ENSMLEG00000022346	SNRPB	98	100.000	Mandrillus_leucophaeus
ENSEEUG00000015568	SNRPB	63	92.778	ENSMAMG00000009294	snrpb	67	94.611	Mastacembelus_armatus
ENSEEUG00000015568	SNRPB	64	92.818	ENSMZEG00005011856	snrpb	69	94.643	Maylandia_zebra
ENSEEUG00000015568	SNRPB	81	83.913	ENSMICG00000015983	-	87	89.947	Microcebus_murinus
ENSEEUG00000015568	SNRPB	80	99.558	ENSMICG00000016519	SNRPB	98	99.558	Microcebus_murinus
ENSEEUG00000015568	SNRPB	80	99.558	ENSMOCG00000002892	-	98	99.558	Microtus_ochrogaster
ENSEEUG00000015568	SNRPB	59	70.060	ENSMOCG00000021362	-	72	73.410	Microtus_ochrogaster
ENSEEUG00000015568	SNRPB	64	92.308	ENSMMOG00000013226	snrpb	71	94.611	Mola_mola
ENSEEUG00000015568	SNRPB	64	92.265	ENSMALG00000020839	snrpb	56	94.048	Monopterus_albus
ENSEEUG00000015568	SNRPB	80	99.558	MGP_CAROLIEiJ_G0024293	Snrpb	98	99.558	Mus_caroli
ENSEEUG00000015568	SNRPB	80	99.558	ENSMUSG00000027404	Snrpb	98	99.558	Mus_musculus
ENSEEUG00000015568	SNRPB	80	99.558	MGP_PahariEiJ_G0025738	Snrpb	98	99.558	Mus_pahari
ENSEEUG00000015568	SNRPB	80	99.558	MGP_SPRETEiJ_G0025213	Snrpb	98	99.558	Mus_spretus
ENSEEUG00000015568	SNRPB	80	100.000	ENSMPUG00000009283	SNRPB	98	100.000	Mustela_putorius_furo
ENSEEUG00000015568	SNRPB	82	95.259	ENSMLUG00000016951	SNRPB	97	95.259	Myotis_lucifugus
ENSEEUG00000015568	SNRPB	80	100.000	ENSNGAG00000012051	Snrpb	98	100.000	Nannospalax_galili
ENSEEUG00000015568	SNRPB	64	90.055	ENSNBRG00000006353	snrpb	61	94.444	Neolamprologus_brichardi
ENSEEUG00000015568	SNRPB	82	98.276	ENSNLEG00000029067	SNRPB	97	98.276	Nomascus_leucogenys
ENSEEUG00000015568	SNRPB	79	97.333	ENSMEUG00000015625	SNRPB	100	97.333	Notamacropus_eugenii
ENSEEUG00000015568	SNRPB	80	96.460	ENSODEG00000016060	-	95	96.460	Octodon_degus
ENSEEUG00000015568	SNRPB	80	100.000	ENSODEG00000004305	-	98	100.000	Octodon_degus
ENSEEUG00000015568	SNRPB	64	92.818	ENSONIG00000000248	snrpb	69	94.643	Oreochromis_niloticus
ENSEEUG00000015568	SNRPB	63	93.296	ENSOCUG00000022423	-	86	96.429	Oryctolagus_cuniculus
ENSEEUG00000015568	SNRPB	75	97.183	ENSOCUG00000028215	-	79	97.354	Oryctolagus_cuniculus
ENSEEUG00000015568	SNRPB	74	72.512	ENSOCUG00000026813	-	70	72.561	Oryctolagus_cuniculus
ENSEEUG00000015568	SNRPB	76	94.884	ENSOCUG00000021456	-	78	95.767	Oryctolagus_cuniculus
ENSEEUG00000015568	SNRPB	82	97.845	ENSOCUG00000014042	-	97	97.845	Oryctolagus_cuniculus
ENSEEUG00000015568	SNRPB	64	92.265	ENSORLG00000021862	snrpb	69	94.643	Oryzias_latipes
ENSEEUG00000015568	SNRPB	82	98.276	ENSOGAG00000016149	SNRPB	97	98.276	Otolemur_garnettii
ENSEEUG00000015568	SNRPB	80	99.558	ENSOARG00000006740	SNRPB	98	99.558	Ovis_aries
ENSEEUG00000015568	SNRPB	80	100.000	ENSPPAG00000036314	SNRPB	98	100.000	Pan_paniscus
ENSEEUG00000015568	SNRPB	82	98.276	ENSPPRG00000003233	-	98	100.000	Panthera_pardus
ENSEEUG00000015568	SNRPB	81	98.268	ENSPTIG00000007468	SNRPB	97	100.000	Panthera_tigris_altaica
ENSEEUG00000015568	SNRPB	80	100.000	ENSPTRG00000013176	SNRPB	98	100.000	Pan_troglodytes
ENSEEUG00000015568	SNRPB	82	98.276	ENSPANG00000020362	SNRPB	97	98.276	Papio_anubis
ENSEEUG00000015568	SNRPB	59	92.262	ENSPKIG00000002865	snrpb	70	94.048	Paramormyrops_kingsleyae
ENSEEUG00000015568	SNRPB	77	96.364	ENSPSIG00000014125	SNRPB	98	88.142	Pelodiscus_sinensis
ENSEEUG00000015568	SNRPB	63	90.449	ENSPMGG00000016349	snrpb	69	92.025	Periophthalmus_magnuspinnatus
ENSEEUG00000015568	SNRPB	80	100.000	ENSPEMG00000007948	Snrpb	98	100.000	Peromyscus_maniculatus_bairdii
ENSEEUG00000015568	SNRPB	61	98.837	ENSPCIG00000004694	SNRPB	71	98.837	Phascolarctos_cinereus
ENSEEUG00000015568	SNRPB	69	83.077	ENSPFOG00000011802	snrpb	63	95.973	Poecilia_formosa
ENSEEUG00000015568	SNRPB	67	76.316	ENSPLAG00000014130	snrpb	59	95.556	Poecilia_latipinna
ENSEEUG00000015568	SNRPB	67	76.842	ENSPREG00000015515	snrpb	62	95.556	Poecilia_reticulata
ENSEEUG00000015568	SNRPB	80	100.000	ENSPPYG00000010841	SNRPB	98	100.000	Pongo_abelii
ENSEEUG00000015568	SNRPB	80	100.000	ENSPCOG00000013686	SNRPB	98	100.000	Propithecus_coquereli
ENSEEUG00000015568	SNRPB	61	98.844	ENSPVAG00000017013	SNRPB	60	98.844	Pteropus_vampyrus
ENSEEUG00000015568	SNRPB	64	92.818	ENSPNYG00000014788	snrpb	69	94.643	Pundamilia_nyererei
ENSEEUG00000015568	SNRPB	64	92.896	ENSPNAG00000016126	snrpb	70	94.643	Pygocentrus_nattereri
ENSEEUG00000015568	SNRPB	80	100.000	ENSRNOG00000006961	Snrpb	98	100.000	Rattus_norvegicus
ENSEEUG00000015568	SNRPB	82	97.845	ENSRBIG00000040505	SNRPB	98	99.558	Rhinopithecus_bieti
ENSEEUG00000015568	SNRPB	82	98.276	ENSRROG00000036094	SNRPB	98	100.000	Rhinopithecus_roxellana
ENSEEUG00000015568	SNRPB	82	98.276	ENSSBOG00000027310	SNRPB	98	100.000	Saimiri_boliviensis_boliviensis
ENSEEUG00000015568	SNRPB	61	99.422	ENSSHAG00000010394	SNRPB	72	99.422	Sarcophilus_harrisii
ENSEEUG00000015568	SNRPB	59	92.262	ENSSFOG00015002870	snrpb	70	93.452	Scleropages_formosus
ENSEEUG00000015568	SNRPB	64	91.803	ENSSMAG00000006766	snrpb	70	94.048	Scophthalmus_maximus
ENSEEUG00000015568	SNRPB	64	92.818	ENSSDUG00000018539	snrpb	69	94.643	Seriola_dumerili
ENSEEUG00000015568	SNRPB	64	92.818	ENSSLDG00000022391	snrpb	69	94.643	Seriola_lalandi_dorsalis
ENSEEUG00000015568	SNRPB	61	84.884	ENSSARG00000003084	SNRPB	74	84.884	Sorex_araneus
ENSEEUG00000015568	SNRPB	77	96.364	ENSSPUG00000015659	SNRPB	92	96.364	Sphenodon_punctatus
ENSEEUG00000015568	SNRPB	64	92.818	ENSSPAG00000021992	snrpb	69	94.643	Stegastes_partitus
ENSEEUG00000015568	SNRPB	80	99.558	ENSSSCG00000040857	-	98	99.558	Sus_scrofa
ENSEEUG00000015568	SNRPB	75	79.245	ENSSSCG00000011966	-	91	75.943	Sus_scrofa
ENSEEUG00000015568	SNRPB	62	79.661	ENSTGUG00000005684	SNRPB	59	96.429	Taeniopygia_guttata
ENSEEUG00000015568	SNRPB	64	91.803	ENSTRUG00000023094	snrpb	72	94.048	Takifugu_rubripes
ENSEEUG00000015568	SNRPB	64	91.803	ENSTNIG00000002991	snrpb	70	94.048	Tetraodon_nigroviridis
ENSEEUG00000015568	SNRPB	61	100.000	ENSUAMG00000005984	-	83	100.000	Ursus_americanus
ENSEEUG00000015568	SNRPB	82	97.845	ENSVVUG00000025654	-	97	97.845	Vulpes_vulpes
ENSEEUG00000015568	SNRPB	95	38.776	ENSVVUG00000018297	-	87	38.776	Vulpes_vulpes
ENSEEUG00000015568	SNRPB	79	79.736	ENSVVUG00000010086	-	85	81.122	Vulpes_vulpes
ENSEEUG00000015568	SNRPB	78	95.475	ENSXETG00000027266	snrpb	72	95.294	Xenopus_tropicalis
ENSEEUG00000015568	SNRPB	60	78.947	ENSXMAG00000028767	snrpb	58	95.556	Xiphophorus_maculatus