EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEEUG00000015611 (Gene tree)
Gene ID: -
Gene Symbol: SF3B3
Alias: KIAA0017|RSE1|SAP130|SF3b130
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Erinaceus_europaeus
Status: putative
Strand: Plus strand
Length: 47035 bases
Position: chrGeneScaffold_8215:5384-52418
Accession: 10770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEEUP00000014268	CPSF_A	PF03178.15	4.3e-102	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEEUT00000015629	SF3B3-201	3651	-	ENSEEUP00000014268	1216 (aa)	-	UPI0000F628BE

Gene Model

Click here to download ENSEEUG00000015611's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEEUG00000015611's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEEUG00000015611	SF3B3	93	99.643	ENSG00000189091	SF3B3	100	100.000	Homo_sapiens
ENSEEUG00000015611	SF3B3	89	93.158	ENSAPOG00000006172	sf3b3	91	93.158	Acanthochromis_polyacanthus
ENSEEUG00000015611	SF3B3	93	99.821	ENSAMEG00000002187	SF3B3	93	99.821	Ailuropoda_melanoleuca
ENSEEUG00000015611	SF3B3	85	93.023	ENSACIG00000016487	sf3b3	92	93.023	Amphilophus_citrinellus
ENSEEUG00000015611	SF3B3	93	93.158	ENSAOCG00000007158	sf3b3	93	93.158	Amphiprion_ocellaris
ENSEEUG00000015611	SF3B3	93	93.158	ENSAPEG00000022786	sf3b3	93	93.158	Amphiprion_percula
ENSEEUG00000015611	SF3B3	93	92.982	ENSATEG00000013708	sf3b3	93	92.982	Anabas_testudineus
ENSEEUG00000015611	SF3B3	74	98.788	ENSAPLG00000004996	SF3B3	91	98.788	Anas_platyrhynchos
ENSEEUG00000015611	SF3B3	93	98.393	ENSACAG00000001817	SF3B3	93	98.393	Anolis_carolinensis
ENSEEUG00000015611	SF3B3	93	99.643	ENSANAG00000028001	SF3B3	99	99.363	Aotus_nancymaae
ENSEEUG00000015611	SF3B3	89	92.632	ENSACLG00000022555	sf3b3	92	92.812	Astatotilapia_calliptera
ENSEEUG00000015611	SF3B3	93	92.632	ENSAMXG00000003410	sf3b3	93	92.632	Astyanax_mexicanus
ENSEEUG00000015611	SF3B3	93	99.643	ENSBTAG00000010627	SF3B3	93	99.643	Bos_taurus
ENSEEUG00000015611	SF3B3	93	66.842	WBGene00019323	teg-4	93	66.842	Caenorhabditis_elegans
ENSEEUG00000015611	SF3B3	93	99.643	ENSCJAG00000014773	SF3B3	93	99.643	Callithrix_jacchus
ENSEEUG00000015611	SF3B3	93	99.821	ENSCAFG00000020151	SF3B3	93	99.821	Canis_familiaris
ENSEEUG00000015611	SF3B3	93	99.821	ENSCAFG00020020912	SF3B3	93	99.821	Canis_lupus_dingo
ENSEEUG00000015611	SF3B3	93	99.821	ENSCHIG00000019822	SF3B3	93	99.821	Capra_hircus
ENSEEUG00000015611	SF3B3	93	99.643	ENSTSYG00000007910	SF3B3	93	99.643	Carlito_syrichta
ENSEEUG00000015611	SF3B3	75	97.619	ENSCAPG00000001484	SF3B3	86	97.619	Cavia_aperea
ENSEEUG00000015611	SF3B3	93	99.643	ENSCPOG00000000586	SF3B3	94	99.643	Cavia_porcellus
ENSEEUG00000015611	SF3B3	93	99.643	ENSCCAG00000017736	SF3B3	93	99.643	Cebus_capucinus
ENSEEUG00000015611	SF3B3	93	99.643	ENSCATG00000036562	SF3B3	97	99.363	Cercocebus_atys
ENSEEUG00000015611	SF3B3	93	99.643	ENSCLAG00000003921	SF3B3	93	99.643	Chinchilla_lanigera
ENSEEUG00000015611	SF3B3	93	99.821	ENSCSAG00000004371	SF3B3	93	99.821	Chlorocebus_sabaeus
ENSEEUG00000015611	SF3B3	82	97.075	ENSCHOG00000001878	SF3B3	81	97.075	Choloepus_hoffmanni
ENSEEUG00000015611	SF3B3	93	98.036	ENSCPBG00000015853	SF3B3	93	98.036	Chrysemys_picta_bellii
ENSEEUG00000015611	SF3B3	93	85.237	ENSCING00000001342	-	93	85.237	Ciona_intestinalis
ENSEEUG00000015611	SF3B3	92	84.007	ENSCSAVG00000011454	-	93	84.007	Ciona_savignyi
ENSEEUG00000015611	SF3B3	93	97.193	ENSCANG00000042920	SF3B3	93	97.193	Colobus_angolensis_palliatus
ENSEEUG00000015611	SF3B3	93	99.464	ENSCGRG00001015908	Sf3b3	93	99.464	Cricetulus_griseus_chok1gshd
ENSEEUG00000015611	SF3B3	93	99.464	ENSCGRG00000010180	Sf3b3	93	99.464	Cricetulus_griseus_crigri
ENSEEUG00000015611	SF3B3	75	92.632	ENSCSEG00000014192	sf3b3	91	92.632	Cynoglossus_semilaevis
ENSEEUG00000015611	SF3B3	93	92.456	ENSCVAG00000010459	sf3b3	93	92.456	Cyprinodon_variegatus
ENSEEUG00000015611	SF3B3	93	92.807	ENSDARG00000103553	sf3b3	93	92.807	Danio_rerio
ENSEEUG00000015611	SF3B3	78	99.643	ENSDNOG00000043626	SF3B3	92	99.643	Dasypus_novemcinctus
ENSEEUG00000015611	SF3B3	53	32.759	ENSDORG00000000127	Ddb1	66	32.759	Dipodomys_ordii
ENSEEUG00000015611	SF3B3	93	99.643	ENSDORG00000014176	Sf3b3	93	99.643	Dipodomys_ordii
ENSEEUG00000015611	SF3B3	93	82.807	FBgn0035162	Sf3b3	92	82.807	Drosophila_melanogaster
ENSEEUG00000015611	SF3B3	81	99.462	ENSETEG00000002729	SF3B3	81	99.462	Echinops_telfairi
ENSEEUG00000015611	SF3B3	93	86.786	ENSEBUG00000006117	sf3b3	93	86.786	Eptatretus_burgeri
ENSEEUG00000015611	SF3B3	93	99.821	ENSEASG00005013376	SF3B3	93	99.821	Equus_asinus_asinus
ENSEEUG00000015611	SF3B3	93	99.821	ENSECAG00000014053	SF3B3	93	99.821	Equus_caballus
ENSEEUG00000015611	SF3B3	93	90.179	ENSELUG00000015417	sf3b3	93	90.179	Esox_lucius
ENSEEUG00000015611	SF3B3	93	99.821	ENSFCAG00000009487	SF3B3	93	99.821	Felis_catus
ENSEEUG00000015611	SF3B3	93	99.107	ENSFALG00000007372	SF3B3	93	99.107	Ficedula_albicollis
ENSEEUG00000015611	SF3B3	93	99.821	ENSFDAG00000002608	SF3B3	93	99.821	Fukomys_damarensis
ENSEEUG00000015611	SF3B3	93	92.632	ENSFHEG00000017824	sf3b3	93	92.632	Fundulus_heteroclitus
ENSEEUG00000015611	SF3B3	93	89.464	ENSGMOG00000008139	sf3b3	93	89.464	Gadus_morhua
ENSEEUG00000015611	SF3B3	93	98.929	ENSGALG00000002531	SF3B3	93	98.929	Gallus_gallus
ENSEEUG00000015611	SF3B3	93	92.632	ENSGAFG00000015206	sf3b3	93	92.632	Gambusia_affinis
ENSEEUG00000015611	SF3B3	93	92.644	ENSGACG00000002646	sf3b3	93	92.644	Gasterosteus_aculeatus
ENSEEUG00000015611	SF3B3	89	98.054	ENSGAGG00000006746	SF3B3	90	98.054	Gopherus_agassizii
ENSEEUG00000015611	SF3B3	93	99.643	ENSGGOG00000003246	SF3B3	99	99.363	Gorilla_gorilla
ENSEEUG00000015611	SF3B3	85	85.179	ENSHBUG00000005960	sf3b3	92	85.179	Haplochromis_burtoni
ENSEEUG00000015611	SF3B3	93	99.643	ENSHGLG00000010135	SF3B3	93	99.643	Heterocephalus_glaber_female
ENSEEUG00000015611	SF3B3	58	31.285	ENSHGLG00000018430	DDB1	62	31.285	Heterocephalus_glaber_female
ENSEEUG00000015611	SF3B3	93	99.643	ENSHGLG00100011148	SF3B3	93	99.643	Heterocephalus_glaber_male
ENSEEUG00000015611	SF3B3	58	30.726	ENSHGLG00100014475	DDB1	62	30.726	Heterocephalus_glaber_male
ENSEEUG00000015611	SF3B3	93	92.807	ENSHCOG00000011981	sf3b3	93	92.807	Hippocampus_comes
ENSEEUG00000015611	SF3B3	93	92.632	ENSIPUG00000020435	sf3b3	93	92.632	Ictalurus_punctatus
ENSEEUG00000015611	SF3B3	93	99.643	ENSSTOG00000007065	SF3B3	93	99.643	Ictidomys_tridecemlineatus
ENSEEUG00000015611	SF3B3	93	99.643	ENSJJAG00000003948	Sf3b3	93	99.643	Jaculus_jaculus
ENSEEUG00000015611	SF3B3	93	89.643	ENSKMAG00000004066	sf3b3	91	92.982	Kryptolebias_marmoratus
ENSEEUG00000015611	SF3B3	93	92.456	ENSLBEG00000018302	sf3b3	93	92.456	Labrus_bergylta
ENSEEUG00000015611	SF3B3	91	93.416	ENSLACG00000012501	SF3B3	93	93.416	Latimeria_chalumnae
ENSEEUG00000015611	SF3B3	93	93.870	ENSLOCG00000007566	sf3b3	93	93.870	Lepisosteus_oculatus
ENSEEUG00000015611	SF3B3	93	99.821	ENSLAFG00000012219	SF3B3	93	99.821	Loxodonta_africana
ENSEEUG00000015611	SF3B3	93	99.643	ENSMFAG00000045487	SF3B3	97	99.363	Macaca_fascicularis
ENSEEUG00000015611	SF3B3	93	99.643	ENSMMUG00000017812	SF3B3	93	99.643	Macaca_mulatta
ENSEEUG00000015611	SF3B3	93	99.643	ENSMNEG00000033385	SF3B3	93	99.643	Macaca_nemestrina
ENSEEUG00000015611	SF3B3	93	99.643	ENSMLEG00000043891	SF3B3	97	99.363	Mandrillus_leucophaeus
ENSEEUG00000015611	SF3B3	93	93.158	ENSMAMG00000016837	sf3b3	93	93.158	Mastacembelus_armatus
ENSEEUG00000015611	SF3B3	82	93.088	ENSMZEG00005026015	sf3b3	91	93.088	Maylandia_zebra
ENSEEUG00000015611	SF3B3	93	92.632	ENSMZEG00005010836	sf3b3	93	92.632	Maylandia_zebra
ENSEEUG00000015611	SF3B3	93	98.929	ENSMGAG00000001597	SF3B3	93	98.929	Meleagris_gallopavo
ENSEEUG00000015611	SF3B3	70	100.000	ENSMAUG00000013618	Sf3b3	84	100.000	Mesocricetus_auratus
ENSEEUG00000015611	SF3B3	93	99.464	ENSMICG00000001363	SF3B3	93	99.464	Microcebus_murinus
ENSEEUG00000015611	SF3B3	93	99.464	ENSMOCG00000006108	Sf3b3	93	99.464	Microtus_ochrogaster
ENSEEUG00000015611	SF3B3	84	88.651	ENSMMOG00000002598	sf3b3	91	88.651	Mola_mola
ENSEEUG00000015611	SF3B3	93	99.821	ENSMODG00000014363	SF3B3	93	99.821	Monodelphis_domestica
ENSEEUG00000015611	SF3B3	93	93.158	ENSMALG00000008014	sf3b3	93	93.158	Monopterus_albus
ENSEEUG00000015611	SF3B3	93	99.286	MGP_CAROLIEiJ_G0031563	Sf3b3	93	99.286	Mus_caroli
ENSEEUG00000015611	SF3B3	93	99.464	ENSMUSG00000033732	Sf3b3	93	99.464	Mus_musculus
ENSEEUG00000015611	SF3B3	93	99.286	MGP_SPRETEiJ_G0032681	Sf3b3	93	99.286	Mus_spretus
ENSEEUG00000015611	SF3B3	93	99.821	ENSMPUG00000010277	SF3B3	93	99.821	Mustela_putorius_furo
ENSEEUG00000015611	SF3B3	93	99.464	ENSMLUG00000014607	SF3B3	93	99.464	Myotis_lucifugus
ENSEEUG00000015611	SF3B3	93	99.643	ENSNGAG00000021903	Sf3b3	93	99.643	Nannospalax_galili
ENSEEUG00000015611	SF3B3	76	88.889	ENSNBRG00000007197	sf3b3	90	88.889	Neolamprologus_brichardi
ENSEEUG00000015611	SF3B3	93	99.643	ENSNLEG00000016127	SF3B3	99	99.363	Nomascus_leucogenys
ENSEEUG00000015611	SF3B3	85	100.000	ENSMEUG00000004479	SF3B3	86	100.000	Notamacropus_eugenii
ENSEEUG00000015611	SF3B3	91	99.464	ENSOPRG00000009847	SF3B3	93	99.464	Ochotona_princeps
ENSEEUG00000015611	SF3B3	93	99.821	ENSODEG00000014154	SF3B3	93	99.821	Octodon_degus
ENSEEUG00000015611	SF3B3	93	93.158	ENSONIG00000011198	sf3b3	93	93.158	Oreochromis_niloticus
ENSEEUG00000015611	SF3B3	93	99.821	ENSOANG00000001161	-	93	99.821	Ornithorhynchus_anatinus
ENSEEUG00000015611	SF3B3	93	99.643	ENSOCUG00000004139	SF3B3	93	99.643	Oryctolagus_cuniculus
ENSEEUG00000015611	SF3B3	93	92.632	ENSORLG00000013472	sf3b3	93	92.632	Oryzias_latipes
ENSEEUG00000015611	SF3B3	93	92.632	ENSORLG00020017473	sf3b3	93	92.632	Oryzias_latipes_hni
ENSEEUG00000015611	SF3B3	93	92.632	ENSORLG00015007710	sf3b3	93	92.632	Oryzias_latipes_hsok
ENSEEUG00000015611	SF3B3	93	92.632	ENSOMEG00000014483	sf3b3	93	92.632	Oryzias_melastigma
ENSEEUG00000015611	SF3B3	93	99.286	ENSOGAG00000016051	SF3B3	93	99.286	Otolemur_garnettii
ENSEEUG00000015611	SF3B3	93	99.290	ENSOARG00000004816	SF3B3	93	99.290	Ovis_aries
ENSEEUG00000015611	SF3B3	93	99.643	ENSPPAG00000026807	SF3B3	99	99.363	Pan_paniscus
ENSEEUG00000015611	SF3B3	93	99.821	ENSPPRG00000001686	SF3B3	93	99.821	Panthera_pardus
ENSEEUG00000015611	SF3B3	82	96.591	ENSPTIG00000020382	SF3B3	92	96.591	Panthera_tigris_altaica
ENSEEUG00000015611	SF3B3	93	99.643	ENSPTRG00000008308	SF3B3	99	99.363	Pan_troglodytes
ENSEEUG00000015611	SF3B3	93	99.643	ENSPANG00000024075	SF3B3	93	99.643	Papio_anubis
ENSEEUG00000015611	SF3B3	93	92.807	ENSPKIG00000002712	sf3b3	93	92.807	Paramormyrops_kingsleyae
ENSEEUG00000015611	SF3B3	82	98.750	ENSPSIG00000002232	SF3B3	92	98.750	Pelodiscus_sinensis
ENSEEUG00000015611	SF3B3	93	99.464	ENSPEMG00000008603	Sf3b3	93	99.464	Peromyscus_maniculatus_bairdii
ENSEEUG00000015611	SF3B3	93	91.930	ENSPMAG00000001793	sf3b3	93	91.930	Petromyzon_marinus
ENSEEUG00000015611	SF3B3	57	31.447	ENSPCIG00000002643	DDB1	61	31.447	Phascolarctos_cinereus
ENSEEUG00000015611	SF3B3	93	99.821	ENSPCIG00000014927	SF3B3	93	99.821	Phascolarctos_cinereus
ENSEEUG00000015611	SF3B3	93	92.456	ENSPFOG00000015516	sf3b3	93	92.456	Poecilia_formosa
ENSEEUG00000015611	SF3B3	93	92.456	ENSPLAG00000014330	sf3b3	93	92.456	Poecilia_latipinna
ENSEEUG00000015611	SF3B3	93	92.456	ENSPMEG00000019856	sf3b3	93	92.456	Poecilia_mexicana
ENSEEUG00000015611	SF3B3	74	92.281	ENSPREG00000019669	sf3b3	88	92.281	Poecilia_reticulata
ENSEEUG00000015611	SF3B3	87	99.728	ENSPPYG00000007539	SF3B3	92	99.728	Pongo_abelii
ENSEEUG00000015611	SF3B3	93	83.393	ENSPCAG00000002623	SF3B3	93	83.393	Procavia_capensis
ENSEEUG00000015611	SF3B3	82	100.000	ENSPCOG00000026582	SF3B3	97	100.000	Propithecus_coquereli
ENSEEUG00000015611	SF3B3	93	99.643	ENSPVAG00000000684	SF3B3	93	99.643	Pteropus_vampyrus
ENSEEUG00000015611	SF3B3	93	92.632	ENSPNYG00000003528	sf3b3	93	92.632	Pundamilia_nyererei
ENSEEUG00000015611	SF3B3	93	93.333	ENSPNAG00000015419	sf3b3	93	93.333	Pygocentrus_nattereri
ENSEEUG00000015611	SF3B3	93	99.464	ENSRNOG00000017724	Sf3b3	93	99.464	Rattus_norvegicus
ENSEEUG00000015611	SF3B3	93	99.643	ENSRBIG00000021904	SF3B3	93	99.643	Rhinopithecus_bieti
ENSEEUG00000015611	SF3B3	93	99.643	ENSRROG00000045703	SF3B3	97	99.363	Rhinopithecus_roxellana
ENSEEUG00000015611	SF3B3	93	99.643	ENSSBOG00000029156	SF3B3	99	99.363	Saimiri_boliviensis_boliviensis
ENSEEUG00000015611	SF3B3	93	99.821	ENSSHAG00000000372	SF3B3	93	99.821	Sarcophilus_harrisii
ENSEEUG00000015611	SF3B3	93	93.333	ENSSFOG00015012877	sf3b3	93	93.333	Scleropages_formosus
ENSEEUG00000015611	SF3B3	93	92.807	ENSSMAG00000014386	sf3b3	93	92.807	Scophthalmus_maximus
ENSEEUG00000015611	SF3B3	93	92.982	ENSSDUG00000021201	sf3b3	93	92.982	Seriola_dumerili
ENSEEUG00000015611	SF3B3	93	92.982	ENSSLDG00000017532	sf3b3	93	92.982	Seriola_lalandi_dorsalis
ENSEEUG00000015611	SF3B3	86	100.000	ENSSARG00000006917	SF3B3	86	100.000	Sorex_araneus
ENSEEUG00000015611	SF3B3	93	98.929	ENSSPUG00000006253	SF3B3	93	98.929	Sphenodon_punctatus
ENSEEUG00000015611	SF3B3	92	90.494	ENSSPAG00000003125	sf3b3	94	90.494	Stegastes_partitus
ENSEEUG00000015611	SF3B3	93	99.821	ENSSSCG00000025323	SF3B3	93	99.821	Sus_scrofa
ENSEEUG00000015611	SF3B3	93	99.109	ENSTGUG00000006082	SF3B3	93	99.109	Taeniopygia_guttata
ENSEEUG00000015611	SF3B3	82	92.982	ENSTNIG00000004857	sf3b3	92	92.982	Tetraodon_nigroviridis
ENSEEUG00000015611	SF3B3	80	97.727	ENSTBEG00000002946	SF3B3	86	97.727	Tupaia_belangeri
ENSEEUG00000015611	SF3B3	93	99.821	ENSTTRG00000005855	SF3B3	93	99.821	Tursiops_truncatus
ENSEEUG00000015611	SF3B3	93	99.821	ENSUAMG00000006780	SF3B3	93	99.821	Ursus_americanus
ENSEEUG00000015611	SF3B3	93	99.821	ENSUMAG00000017757	SF3B3	93	99.821	Ursus_maritimus
ENSEEUG00000015611	SF3B3	87	99.728	ENSVPAG00000003202	SF3B3	87	99.728	Vicugna_pacos
ENSEEUG00000015611	SF3B3	93	99.643	ENSVVUG00000017922	SF3B3	93	99.643	Vulpes_vulpes
ENSEEUG00000015611	SF3B3	93	95.893	ENSXETG00000032869	SF3B3	93	95.893	Xenopus_tropicalis
ENSEEUG00000015611	SF3B3	70	92.632	ENSXCOG00000013628	sf3b3	88	92.632	Xiphophorus_couchianus
ENSEEUG00000015611	SF3B3	93	92.632	ENSXMAG00000006334	sf3b3	93	92.632	Xiphophorus_maculatus