EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000000088 (Gene tree)
Gene ID: -
Gene Symbol: snrpd1
Alias: CHUNP6882|fk26a01|wu:fk26a01|zgc:86929
Full Name: small nuclear ribonucleoprotein D1 polypeptide
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 2558 bases
Position: chrLG10:17210113-17212670
Accession: ZDB-GENE-020419-14
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000001361	LSM	PF01423.22	1.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000017499	-	360	-	ENSELUP00000001361	119 (aa)	-	-

Gene Model

Click here to download ENSELUG00000000088's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000000088's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000000088	snrpd1	79	95.745	ENSG00000167088	SNRPD1	93	85.586	Homo_sapiens
ENSELUG00000000088	snrpd1	79	97.872	ENSAPOG00000019446	snrpd1	55	95.000	Acanthochromis_polyacanthus
ENSELUG00000000088	snrpd1	76	95.556	ENSAMEG00000002576	SNRPD1	93	83.486	Ailuropoda_melanoleuca
ENSELUG00000000088	snrpd1	73	97.701	ENSACIG00000011263	snrpd1	93	86.538	Amphilophus_citrinellus
ENSELUG00000000088	snrpd1	79	97.872	ENSAOCG00000007406	snrpd1	93	87.387	Amphiprion_ocellaris
ENSELUG00000000088	snrpd1	79	92.553	ENSAPEG00000014961	snrpd1	93	82.883	Amphiprion_percula
ENSELUG00000000088	snrpd1	73	97.701	ENSAPEG00000012539	SNRPD1	93	86.538	Amphiprion_percula
ENSELUG00000000088	snrpd1	79	97.872	ENSATEG00000014399	snrpd1	93	87.387	Anabas_testudineus
ENSELUG00000000088	snrpd1	76	95.556	ENSAPLG00000012256	SNRPD1	90	85.047	Anas_platyrhynchos
ENSELUG00000000088	snrpd1	79	95.745	ENSACAG00000006364	SNRPD1	93	85.586	Anolis_carolinensis
ENSELUG00000000088	snrpd1	79	95.745	ENSANAG00000025641	SNRPD1	93	85.586	Aotus_nancymaae
ENSELUG00000000088	snrpd1	73	97.701	ENSACLG00000017406	snrpd1	93	86.538	Astatotilapia_calliptera
ENSELUG00000000088	snrpd1	79	98.936	ENSAMXG00000004589	snrpd1	93	88.288	Astyanax_mexicanus
ENSELUG00000000088	snrpd1	79	93.617	ENSBTAG00000012376	-	75	91.000	Bos_taurus
ENSELUG00000000088	snrpd1	79	95.745	ENSBTAG00000008292	SNRPD1	93	85.586	Bos_taurus
ENSELUG00000000088	snrpd1	78	91.398	ENSBTAG00000055316	-	84	89.796	Bos_taurus
ENSELUG00000000088	snrpd1	79	91.489	ENSBTAG00000047266	-	93	81.982	Bos_taurus
ENSELUG00000000088	snrpd1	74	78.409	WBGene00004916	snr-3	79	72.000	Caenorhabditis_elegans
ENSELUG00000000088	snrpd1	79	95.745	ENSCJAG00000042955	SNRPD1	93	85.586	Callithrix_jacchus
ENSELUG00000000088	snrpd1	79	95.745	ENSCAFG00000018247	SNRPD1	93	85.586	Canis_familiaris
ENSELUG00000000088	snrpd1	79	95.745	ENSCAFG00020015914	SNRPD1	73	95.745	Canis_lupus_dingo
ENSELUG00000000088	snrpd1	79	92.553	ENSCHIG00000005557	SNRPD1	92	84.404	Capra_hircus
ENSELUG00000000088	snrpd1	79	95.745	ENSTSYG00000030028	SNRPD1	93	85.586	Carlito_syrichta
ENSELUG00000000088	snrpd1	76	94.444	ENSCAPG00000008103	SNRPD1	92	84.112	Cavia_aperea
ENSELUG00000000088	snrpd1	79	95.745	ENSCPOG00000004679	SNRPD1	93	85.586	Cavia_porcellus
ENSELUG00000000088	snrpd1	79	95.745	ENSCCAG00000032658	SNRPD1	93	85.586	Cebus_capucinus
ENSELUG00000000088	snrpd1	79	91.489	ENSCCAG00000016652	-	93	81.982	Cebus_capucinus
ENSELUG00000000088	snrpd1	79	94.681	ENSCCAG00000020611	-	93	84.685	Cebus_capucinus
ENSELUG00000000088	snrpd1	79	91.489	ENSCCAG00000005390	-	93	81.982	Cebus_capucinus
ENSELUG00000000088	snrpd1	79	95.745	ENSCATG00000039978	SNRPD1	93	85.586	Cercocebus_atys
ENSELUG00000000088	snrpd1	79	95.745	ENSCLAG00000008691	SNRPD1	93	85.586	Chinchilla_lanigera
ENSELUG00000000088	snrpd1	79	95.745	ENSCSAG00000017654	SNRPD1	93	85.586	Chlorocebus_sabaeus
ENSELUG00000000088	snrpd1	86	90.196	ENSCPBG00000023143	SNRPD1	93	85.586	Chrysemys_picta_bellii
ENSELUG00000000088	snrpd1	72	83.721	ENSCING00000024100	-	88	71.171	Ciona_intestinalis
ENSELUG00000000088	snrpd1	73	83.908	ENSCSAVG00000004578	-	79	77.000	Ciona_savignyi
ENSELUG00000000088	snrpd1	79	95.745	ENSCGRG00001021055	-	93	85.586	Cricetulus_griseus_chok1gshd
ENSELUG00000000088	snrpd1	79	71.277	ENSCGRG00001009945	-	89	70.000	Cricetulus_griseus_chok1gshd
ENSELUG00000000088	snrpd1	79	95.745	ENSCGRG00000000490	-	93	85.586	Cricetulus_griseus_crigri
ENSELUG00000000088	snrpd1	79	71.277	ENSCGRG00000006224	-	89	70.000	Cricetulus_griseus_crigri
ENSELUG00000000088	snrpd1	79	96.809	ENSCSEG00000018141	snrpd1	93	86.486	Cynoglossus_semilaevis
ENSELUG00000000088	snrpd1	79	97.872	ENSCVAG00000000534	snrpd1	93	87.387	Cyprinodon_variegatus
ENSELUG00000000088	snrpd1	79	98.936	ENSDARG00000011648	snrpd1	96	97.802	Danio_rerio
ENSELUG00000000088	snrpd1	79	95.745	ENSDNOG00000040310	SNRPD1	93	85.586	Dasypus_novemcinctus
ENSELUG00000000088	snrpd1	79	95.745	ENSDORG00000008349	Snrpd1	93	85.586	Dipodomys_ordii
ENSELUG00000000088	snrpd1	79	81.915	FBgn0261933	SmD1	81	79.000	Drosophila_melanogaster
ENSELUG00000000088	snrpd1	53	93.651	ENSETEG00000011689	SNRPD1	67	80.000	Echinops_telfairi
ENSELUG00000000088	snrpd1	82	87.755	ENSEBUG00000003170	snrpd1	97	87.755	Eptatretus_burgeri
ENSELUG00000000088	snrpd1	73	95.402	ENSEASG00005002433	SNRPD1	93	84.615	Equus_asinus_asinus
ENSELUG00000000088	snrpd1	73	95.402	ENSECAG00000014373	SNRPD1	93	84.615	Equus_caballus
ENSELUG00000000088	snrpd1	75	95.506	ENSEEUG00000004987	SNRPD1	100	95.506	Erinaceus_europaeus
ENSELUG00000000088	snrpd1	79	95.745	ENSFCAG00000012352	SNRPD1	93	85.586	Felis_catus
ENSELUG00000000088	snrpd1	73	95.402	ENSFALG00000002646	SNRPD1	93	84.615	Ficedula_albicollis
ENSELUG00000000088	snrpd1	79	98.936	ENSGMOG00000015607	snrpd1	93	88.288	Gadus_morhua
ENSELUG00000000088	snrpd1	79	95.745	ENSGALG00000041334	SNRPD1	93	85.586	Gallus_gallus
ENSELUG00000000088	snrpd1	79	97.872	ENSGAFG00000011171	snrpd1	93	87.387	Gambusia_affinis
ENSELUG00000000088	snrpd1	79	98.936	ENSGACG00000005201	SNRPD1	93	88.288	Gasterosteus_aculeatus
ENSELUG00000000088	snrpd1	79	95.745	ENSGAGG00000011197	SNRPD1	93	85.586	Gopherus_agassizii
ENSELUG00000000088	snrpd1	79	95.745	ENSGGOG00000041053	SNRPD1	93	85.586	Gorilla_gorilla
ENSELUG00000000088	snrpd1	79	90.426	ENSGGOG00000026706	-	94	79.310	Gorilla_gorilla
ENSELUG00000000088	snrpd1	79	97.872	ENSHBUG00000003236	snrpd1	93	87.387	Haplochromis_burtoni
ENSELUG00000000088	snrpd1	79	95.745	ENSHGLG00000007152	SNRPD1	93	85.586	Heterocephalus_glaber_female
ENSELUG00000000088	snrpd1	79	95.745	ENSHGLG00100008618	SNRPD1	93	85.586	Heterocephalus_glaber_male
ENSELUG00000000088	snrpd1	79	97.872	ENSIPUG00000003576	snrpd1	93	87.387	Ictalurus_punctatus
ENSELUG00000000088	snrpd1	79	95.745	ENSSTOG00000000485	SNRPD1	93	85.586	Ictidomys_tridecemlineatus
ENSELUG00000000088	snrpd1	79	95.745	ENSJJAG00000017698	Snrpd1	93	85.586	Jaculus_jaculus
ENSELUG00000000088	snrpd1	79	97.872	ENSKMAG00000005987	snrpd1	93	87.387	Kryptolebias_marmoratus
ENSELUG00000000088	snrpd1	79	97.872	ENSLBEG00000003327	snrpd1	93	87.387	Labrus_bergylta
ENSELUG00000000088	snrpd1	79	95.745	ENSLACG00000001955	SNRPD1	93	85.586	Latimeria_chalumnae
ENSELUG00000000088	snrpd1	77	94.565	ENSLOCG00000002003	snrpd1	93	84.404	Lepisosteus_oculatus
ENSELUG00000000088	snrpd1	78	93.548	ENSLAFG00000005819	SNRPD1	93	83.636	Loxodonta_africana
ENSELUG00000000088	snrpd1	79	95.745	ENSMFAG00000042080	SNRPD1	93	85.586	Macaca_fascicularis
ENSELUG00000000088	snrpd1	75	95.506	ENSMMUG00000003992	SNRPD1	91	84.906	Macaca_mulatta
ENSELUG00000000088	snrpd1	79	95.745	ENSMNEG00000041296	SNRPD1	93	85.586	Macaca_nemestrina
ENSELUG00000000088	snrpd1	79	95.745	ENSMLEG00000028659	SNRPD1	93	85.586	Mandrillus_leucophaeus
ENSELUG00000000088	snrpd1	79	97.872	ENSMAMG00000012971	snrpd1	93	87.387	Mastacembelus_armatus
ENSELUG00000000088	snrpd1	79	97.872	ENSMZEG00005004685	snrpd1	93	87.387	Maylandia_zebra
ENSELUG00000000088	snrpd1	76	95.556	ENSMGAG00000011598	SNRPD1	88	85.047	Meleagris_gallopavo
ENSELUG00000000088	snrpd1	95	81.416	ENSMAUG00000006829	-	73	81.416	Mesocricetus_auratus
ENSELUG00000000088	snrpd1	79	79.787	ENSMAUG00000016502	-	89	77.778	Mesocricetus_auratus
ENSELUG00000000088	snrpd1	79	79.787	ENSMAUG00000016467	-	89	77.778	Mesocricetus_auratus
ENSELUG00000000088	snrpd1	79	95.745	ENSMICG00000044066	SNRPD1	93	85.586	Microcebus_murinus
ENSELUG00000000088	snrpd1	79	95.745	ENSMOCG00000017367	Snrpd1	93	85.586	Microtus_ochrogaster
ENSELUG00000000088	snrpd1	79	97.872	ENSMMOG00000019089	snrpd1	93	87.387	Mola_mola
ENSELUG00000000088	snrpd1	79	95.745	ENSMODG00000021487	SNRPD1	93	85.586	Monodelphis_domestica
ENSELUG00000000088	snrpd1	79	97.872	ENSMALG00000014459	snrpd1	93	87.387	Monopterus_albus
ENSELUG00000000088	snrpd1	79	95.745	MGP_CAROLIEiJ_G0021994	Snrpd1	93	85.586	Mus_caroli
ENSELUG00000000088	snrpd1	79	95.745	ENSMUSG00000002477	Snrpd1	93	85.586	Mus_musculus
ENSELUG00000000088	snrpd1	79	95.745	MGP_PahariEiJ_G0018731	Snrpd1	93	85.586	Mus_pahari
ENSELUG00000000088	snrpd1	79	95.745	MGP_SPRETEiJ_G0022910	Snrpd1	93	85.586	Mus_spretus
ENSELUG00000000088	snrpd1	79	94.681	ENSMPUG00000020041	-	93	84.685	Mustela_putorius_furo
ENSELUG00000000088	snrpd1	76	95.556	ENSMPUG00000005567	-	93	83.486	Mustela_putorius_furo
ENSELUG00000000088	snrpd1	77	94.565	ENSMLUG00000009124	SNRPD1	84	84.404	Myotis_lucifugus
ENSELUG00000000088	snrpd1	79	95.745	ENSNGAG00000023946	Snrpd1	93	85.586	Nannospalax_galili
ENSELUG00000000088	snrpd1	79	97.872	ENSNBRG00000012119	snrpd1	78	97.872	Neolamprologus_brichardi
ENSELUG00000000088	snrpd1	79	92.553	ENSNLEG00000031430	SNRPD1	93	82.883	Nomascus_leucogenys
ENSELUG00000000088	snrpd1	79	95.745	ENSODEG00000005764	SNRPD1	93	85.586	Octodon_degus
ENSELUG00000000088	snrpd1	79	97.872	ENSONIG00000002486	snrpd1	93	87.387	Oreochromis_niloticus
ENSELUG00000000088	snrpd1	76	86.667	ENSOANG00000004638	-	90	77.570	Ornithorhynchus_anatinus
ENSELUG00000000088	snrpd1	79	94.681	ENSOCUG00000014399	-	93	84.685	Oryctolagus_cuniculus
ENSELUG00000000088	snrpd1	76	95.556	ENSOCUG00000023761	-	93	83.486	Oryctolagus_cuniculus
ENSELUG00000000088	snrpd1	73	97.701	ENSORLG00000012516	snrpd1	93	86.538	Oryzias_latipes
ENSELUG00000000088	snrpd1	79	97.872	ENSORLG00020005743	snrpd1	93	87.387	Oryzias_latipes_hni
ENSELUG00000000088	snrpd1	79	97.872	ENSORLG00015013402	snrpd1	93	87.387	Oryzias_latipes_hsok
ENSELUG00000000088	snrpd1	79	97.872	ENSOMEG00000011571	snrpd1	93	87.387	Oryzias_melastigma
ENSELUG00000000088	snrpd1	79	91.489	ENSOGAG00000007833	SNRPD1	92	83.486	Otolemur_garnettii
ENSELUG00000000088	snrpd1	79	95.745	ENSOARG00000003413	-	75	93.000	Ovis_aries
ENSELUG00000000088	snrpd1	79	95.745	ENSPPAG00000042593	SNRPD1	93	85.586	Pan_paniscus
ENSELUG00000000088	snrpd1	79	95.745	ENSPPRG00000002399	SNRPD1	93	85.586	Panthera_pardus
ENSELUG00000000088	snrpd1	79	67.021	ENSPPRG00000005009	-	91	61.261	Panthera_pardus
ENSELUG00000000088	snrpd1	75	95.506	ENSPTIG00000013206	SNRPD1	93	84.906	Panthera_tigris_altaica
ENSELUG00000000088	snrpd1	91	84.259	ENSPTRG00000009909	SNRPD1	93	85.586	Pan_troglodytes
ENSELUG00000000088	snrpd1	79	89.362	ENSPTRG00000050159	-	85	87.000	Pan_troglodytes
ENSELUG00000000088	snrpd1	79	95.745	ENSPANG00000023478	SNRPD1	93	85.586	Papio_anubis
ENSELUG00000000088	snrpd1	73	97.701	ENSPKIG00000021610	snrpd1	93	86.538	Paramormyrops_kingsleyae
ENSELUG00000000088	snrpd1	79	95.745	ENSPKIG00000003985	SNRPD1	93	85.586	Paramormyrops_kingsleyae
ENSELUG00000000088	snrpd1	79	97.872	ENSPMGG00000001862	snrpd1	93	87.387	Periophthalmus_magnuspinnatus
ENSELUG00000000088	snrpd1	79	95.745	ENSPEMG00000014773	-	93	85.586	Peromyscus_maniculatus_bairdii
ENSELUG00000000088	snrpd1	79	82.292	ENSPMAG00000003938	-	84	80.392	Petromyzon_marinus
ENSELUG00000000088	snrpd1	79	95.745	ENSPCIG00000020320	SNRPD1	93	85.586	Phascolarctos_cinereus
ENSELUG00000000088	snrpd1	79	97.872	ENSPFOG00000012448	SNRPD1	88	95.000	Poecilia_formosa
ENSELUG00000000088	snrpd1	79	97.872	ENSPLAG00000006738	snrpd1	88	95.000	Poecilia_latipinna
ENSELUG00000000088	snrpd1	79	97.872	ENSPMEG00000021942	snrpd1	88	95.000	Poecilia_mexicana
ENSELUG00000000088	snrpd1	79	97.872	ENSPREG00000007094	snrpd1	93	87.387	Poecilia_reticulata
ENSELUG00000000088	snrpd1	79	95.745	ENSPPYG00000025874	SNRPD1	93	85.586	Pongo_abelii
ENSELUG00000000088	snrpd1	79	95.745	ENSPCOG00000013327	SNRPD1	93	85.586	Propithecus_coquereli
ENSELUG00000000088	snrpd1	79	95.745	ENSPVAG00000005511	SNRPD1	74	85.586	Pteropus_vampyrus
ENSELUG00000000088	snrpd1	79	97.872	ENSPNAG00000017824	snrpd1	93	87.387	Pygocentrus_nattereri
ENSELUG00000000088	snrpd1	79	95.745	ENSRNOG00000013714	Snrpd1	93	85.586	Rattus_norvegicus
ENSELUG00000000088	snrpd1	79	95.745	ENSRBIG00000022996	SNRPD1	93	85.586	Rhinopithecus_bieti
ENSELUG00000000088	snrpd1	79	95.745	ENSRROG00000027640	SNRPD1	93	85.586	Rhinopithecus_roxellana
ENSELUG00000000088	snrpd1	79	95.745	ENSSBOG00000020998	SNRPD1	93	85.586	Saimiri_boliviensis_boliviensis
ENSELUG00000000088	snrpd1	79	95.745	ENSSHAG00000011791	SNRPD1	93	85.586	Sarcophilus_harrisii
ENSELUG00000000088	snrpd1	79	96.809	ENSSFOG00015022253	-	93	86.486	Scleropages_formosus
ENSELUG00000000088	snrpd1	79	96.809	ENSSFOG00015008809	-	93	86.486	Scleropages_formosus
ENSELUG00000000088	snrpd1	79	96.809	ENSSMAG00000008765	snrpd1	93	86.486	Scophthalmus_maximus
ENSELUG00000000088	snrpd1	76	96.667	ENSSDUG00000010521	snrpd1	92	85.185	Seriola_dumerili
ENSELUG00000000088	snrpd1	79	97.872	ENSSLDG00000011858	snrpd1	93	87.387	Seriola_lalandi_dorsalis
ENSELUG00000000088	snrpd1	56	95.522	ENSSARG00000004271	SNRPD1	100	95.522	Sorex_araneus
ENSELUG00000000088	snrpd1	79	95.745	ENSSPUG00000002824	SNRPD1	93	85.586	Sphenodon_punctatus
ENSELUG00000000088	snrpd1	73	97.701	ENSSPAG00000015229	snrpd1	93	86.538	Stegastes_partitus
ENSELUG00000000088	snrpd1	79	95.745	ENSSSCG00000003701	SNRPD1	93	85.586	Sus_scrofa
ENSELUG00000000088	snrpd1	76	95.556	ENSTGUG00000005095	SNRPD1	90	85.047	Taeniopygia_guttata
ENSELUG00000000088	snrpd1	73	97.701	ENSTRUG00000008977	snrpd1	93	86.538	Takifugu_rubripes
ENSELUG00000000088	snrpd1	66	92.308	ENSTNIG00000001224	snrpd1	91	81.053	Tetraodon_nigroviridis
ENSELUG00000000088	snrpd1	53	93.651	ENSTBEG00000013776	SNRPD1	91	80.000	Tupaia_belangeri
ENSELUG00000000088	snrpd1	76	95.556	ENSTTRG00000002654	SNRPD1	93	85.047	Tursiops_truncatus
ENSELUG00000000088	snrpd1	79	95.745	ENSUAMG00000013431	SNRPD1	94	95.745	Ursus_americanus
ENSELUG00000000088	snrpd1	79	95.745	ENSUMAG00000019740	SNRPD1	93	85.586	Ursus_maritimus
ENSELUG00000000088	snrpd1	79	95.745	ENSVPAG00000010056	SNRPD1	74	85.586	Vicugna_pacos
ENSELUG00000000088	snrpd1	73	95.402	ENSVVUG00000004009	SNRPD1	93	84.615	Vulpes_vulpes
ENSELUG00000000088	snrpd1	79	93.617	ENSXETG00000027354	snrpd1	93	83.784	Xenopus_tropicalis
ENSELUG00000000088	snrpd1	79	97.872	ENSXCOG00000020108	snrpd1	93	87.387	Xiphophorus_couchianus
ENSELUG00000000088	snrpd1	79	97.872	ENSXMAG00000003368	snrpd1	93	87.387	Xiphophorus_maculatus