EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000000141 (Gene tree)
Gene ID: 105021369
Gene Symbol: -
Alias: -
Full Name: NOP9 nucleolar protein
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 8699 bases
Position: chrLG03:15083651-15092349
Accession: 105021369
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000028468	PUF	PF00806.19	7.8e-18	1	1
ENSELUP00000003824	PUF	PF00806.19	8.4e-18	1	1
ENSELUP00000003829	PUF	PF00806.19	1.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000013372	-	3083	XM_010888992	ENSELUP00000003824	655 (aa)	XP_010887294	UPI0005762AEB
ENSELUT00000013346	-	3518	-	ENSELUP00000028468	644 (aa)	-	-
ENSELUT00000013361	-	3215	XM_020043306	ENSELUP00000003829	688 (aa)	XP_019898865	UPI0009734A2E

Gene Model

Click here to download ENSELUG00000000141's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000000141's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000000141	-	53	46.386	ENSACAG00000004346	NOP9	96	31.544	Anolis_carolinensis
ENSELUG00000000141	-	87	41.227	ENSCPBG00000025731	NOP9	97	41.513	Chrysemys_picta_bellii
ENSELUG00000000141	-	92	66.612	ENSCVAG00000006446	-	94	68.305	Cyprinodon_variegatus
ENSELUG00000000141	-	89	71.769	ENSPKIG00000003330	-	93	72.870	Paramormyrops_kingsleyae
ENSELUG00000000141	-	87	66.957	ENSPMGG00000020361	-	99	64.204	Periophthalmus_magnuspinnatus
ENSELUG00000000141	-	64	33.781	ENSPMAG00000001069	NOP9	99	33.781	Petromyzon_marinus
ENSELUG00000000141	-	94	68.328	ENSSFOG00015010515	nop9	93	71.701	Scleropages_formosus
ENSELUG00000000141	-	87	45.848	ENSXETG00000008138	nop9	91	46.021	Xenopus_tropicalis