EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000000181 (Gene tree)
Gene ID: 105027855
Gene Symbol: skiv2l
Alias: fb70b07|wu:fb70b07
Full Name: Ski2 like RNA helicase
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 27572 bases
Position: chrLG10:3261243-3288814
Accession: 105027855
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000029071	rRNA_proc-arch	PF13234.6	1.2e-27	1	1
ENSELUP00000029057	rRNA_proc-arch	PF13234.6	1.3e-27	1	1
ENSELUP00000029057	DEAD	PF00270.29	6.3e-17	1	1
ENSELUP00000029071	DEAD	PF00270.29	7.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000011841	-	3525	-	ENSELUP00000029057	1174 (aa)	-	-
ENSELUT00000011786	-	4159	XM_010900176	ENSELUP00000029071	1249 (aa)	XP_010898478	UPI000577EE67

Gene Model

Click here to download ENSELUG00000000181's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000000181's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000000181	skiv2l	87	34.509	ENSELUG00000004898	mtrex	97	36.164

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000000181	skiv2l	94	66.598	ENSG00000204351	SKIV2L	99	60.079	Homo_sapiens
ENSELUG00000000181	skiv2l	100	84.800	ENSAPOG00000008257	skiv2l	100	84.880	Acanthochromis_polyacanthus
ENSELUG00000000181	skiv2l	94	66.391	ENSAMEG00000002078	SKIV2L	99	60.127	Ailuropoda_melanoleuca
ENSELUG00000000181	skiv2l	99	82.714	ENSACIG00000016719	skiv2l	99	83.199	Amphilophus_citrinellus
ENSELUG00000000181	skiv2l	100	85.040	ENSAOCG00000017352	skiv2l	100	85.120	Amphiprion_ocellaris
ENSELUG00000000181	skiv2l	100	85.040	ENSAPEG00000001055	skiv2l	100	85.120	Amphiprion_percula
ENSELUG00000000181	skiv2l	97	88.528	ENSATEG00000007601	skiv2l	100	85.520	Anabas_testudineus
ENSELUG00000000181	skiv2l	95	68.210	ENSACAG00000011746	SKIV2L	99	62.744	Anolis_carolinensis
ENSELUG00000000181	skiv2l	94	66.598	ENSANAG00000037992	SKIV2L	99	60.522	Aotus_nancymaae
ENSELUG00000000181	skiv2l	100	84.400	ENSACLG00000006886	skiv2l	100	84.560	Astatotilapia_calliptera
ENSELUG00000000181	skiv2l	99	83.482	ENSAMXG00000011517	skiv2l	100	83.387	Astyanax_mexicanus
ENSELUG00000000181	skiv2l	94	66.286	ENSBTAG00000005587	SKIV2L	99	59.652	Bos_taurus
ENSELUG00000000181	skiv2l	95	40.804	WBGene00008502	skih-2	99	40.603	Caenorhabditis_elegans
ENSELUG00000000181	skiv2l	94	66.494	ENSCJAG00000002263	SKIV2L	99	60.443	Callithrix_jacchus
ENSELUG00000000181	skiv2l	94	66.287	ENSCAFG00000000679	SKIV2L	99	60.206	Canis_familiaris
ENSELUG00000000181	skiv2l	94	66.184	ENSCAFG00020000948	SKIV2L	99	60.127	Canis_lupus_dingo
ENSELUG00000000181	skiv2l	94	66.390	ENSCHIG00000012897	SKIV2L	99	59.731	Capra_hircus
ENSELUG00000000181	skiv2l	94	66.598	ENSTSYG00000012133	SKIV2L	99	60.331	Carlito_syrichta
ENSELUG00000000181	skiv2l	94	66.287	ENSCPOG00000001307	SKIV2L	99	60.079	Cavia_porcellus
ENSELUG00000000181	skiv2l	94	66.598	ENSCCAG00000026206	SKIV2L	99	60.474	Cebus_capucinus
ENSELUG00000000181	skiv2l	94	66.909	ENSCATG00000036901	SKIV2L	99	60.364	Cercocebus_atys
ENSELUG00000000181	skiv2l	94	66.081	ENSCLAG00000007678	SKIV2L	99	59.921	Chinchilla_lanigera
ENSELUG00000000181	skiv2l	94	66.701	ENSCSAG00000008988	SKIV2L	99	60.443	Chlorocebus_sabaeus
ENSELUG00000000181	skiv2l	84	68.237	ENSCPBG00000000343	SKIV2L	98	64.000	Chrysemys_picta_bellii
ENSELUG00000000181	skiv2l	93	50.085	ENSCING00000005576	-	99	50.085	Ciona_intestinalis
ENSELUG00000000181	skiv2l	94	66.909	ENSCANG00000039709	SKIV2L	100	59.794	Colobus_angolensis_palliatus
ENSELUG00000000181	skiv2l	94	66.426	ENSCGRG00001008385	Skiv2l	99	60.301	Cricetulus_griseus_chok1gshd
ENSELUG00000000181	skiv2l	99	86.203	ENSCSEG00000011326	skiv2l	99	83.641	Cynoglossus_semilaevis
ENSELUG00000000181	skiv2l	100	84.640	ENSCVAG00000003072	skiv2l	100	84.640	Cyprinodon_variegatus
ENSELUG00000000181	skiv2l	100	83.147	ENSDARG00000062206	skiv2l	100	83.147	Danio_rerio
ENSELUG00000000181	skiv2l	88	76.846	ENSDNOG00000037590	SKIV2L	84	76.846	Dasypus_novemcinctus
ENSELUG00000000181	skiv2l	94	44.796	FBgn0039117	tst	98	44.796	Drosophila_melanogaster
ENSELUG00000000181	skiv2l	72	77.778	ENSETEG00000009522	SKIV2L	68	77.778	Echinops_telfairi
ENSELUG00000000181	skiv2l	86	62.761	ENSEBUG00000013680	-	98	55.660	Eptatretus_burgeri
ENSELUG00000000181	skiv2l	88	66.701	ENSEASG00005015534	SKIV2L	99	62.063	Equus_asinus_asinus
ENSELUG00000000181	skiv2l	89	67.261	ENSECAG00000021823	SKIV2L	95	60.616	Equus_caballus
ENSELUG00000000181	skiv2l	54	73.518	ENSEEUG00000005049	SKIV2L	56	73.518	Erinaceus_europaeus
ENSELUG00000000181	skiv2l	94	66.598	ENSFCAG00000004519	SKIV2L	99	60.285	Felis_catus
ENSELUG00000000181	skiv2l	94	65.768	ENSFDAG00000009438	SKIV2L	99	59.163	Fukomys_damarensis
ENSELUG00000000181	skiv2l	98	88.426	ENSFHEG00000008853	skiv2l	100	85.280	Fundulus_heteroclitus
ENSELUG00000000181	skiv2l	99	80.929	ENSGMOG00000005926	skiv2l	99	80.929	Gadus_morhua
ENSELUG00000000181	skiv2l	81	57.351	ENSGALG00000035499	SKIV2L	99	56.939	Gallus_gallus
ENSELUG00000000181	skiv2l	99	87.146	ENSGAFG00000002382	skiv2l	100	85.040	Gambusia_affinis
ENSELUG00000000181	skiv2l	100	84.622	ENSGACG00000002927	skiv2l	99	84.701	Gasterosteus_aculeatus
ENSELUG00000000181	skiv2l	94	66.805	ENSGGOG00000002270	SKIV2L	99	60.316	Gorilla_gorilla
ENSELUG00000000181	skiv2l	100	84.388	ENSHBUG00000000726	skiv2l	100	84.548	Haplochromis_burtoni
ENSELUG00000000181	skiv2l	94	66.287	ENSHGLG00000016596	SKIV2L	99	59.574	Heterocephalus_glaber_female
ENSELUG00000000181	skiv2l	94	64.286	ENSHGLG00100014161	SKIV2L	99	58.123	Heterocephalus_glaber_male
ENSELUG00000000181	skiv2l	97	81.014	ENSHCOG00000007191	skiv2l	100	81.014	Hippocampus_comes
ENSELUG00000000181	skiv2l	100	83.213	ENSIPUG00000016263	skiv2l	100	83.509	Ictalurus_punctatus
ENSELUG00000000181	skiv2l	95	67.116	ENSSTOG00000014596	SKIV2L	99	60.032	Ictidomys_tridecemlineatus
ENSELUG00000000181	skiv2l	69	80.000	ENSLACG00000002986	-	69	80.000	Latimeria_chalumnae
ENSELUG00000000181	skiv2l	94	66.391	ENSLAFG00000014231	SKIV2L	99	60.221	Loxodonta_africana
ENSELUG00000000181	skiv2l	94	67.012	ENSMFAG00000034235	SKIV2L	99	60.522	Macaca_fascicularis
ENSELUG00000000181	skiv2l	94	67.012	ENSMMUG00000000736	SKIV2L	99	60.443	Macaca_mulatta
ENSELUG00000000181	skiv2l	94	67.012	ENSMNEG00000044474	SKIV2L	99	60.522	Macaca_nemestrina
ENSELUG00000000181	skiv2l	94	66.909	ENSMLEG00000030512	SKIV2L	99	60.285	Mandrillus_leucophaeus
ENSELUG00000000181	skiv2l	100	84.585	ENSMAMG00000002927	skiv2l	100	84.585	Mastacembelus_armatus
ENSELUG00000000181	skiv2l	100	84.468	ENSMZEG00005026415	skiv2l	100	84.628	Maylandia_zebra
ENSELUG00000000181	skiv2l	54	70.293	ENSMGAG00000001320	SKIV2L	95	48.922	Meleagris_gallopavo
ENSELUG00000000181	skiv2l	94	66.426	ENSMAUG00000018613	Skiv2l	99	60.316	Mesocricetus_auratus
ENSELUG00000000181	skiv2l	94	66.909	ENSMICG00000046331	SKIV2L	99	60.285	Microcebus_murinus
ENSELUG00000000181	skiv2l	94	64.566	ENSMOCG00000014240	Skiv2l	99	59.192	Microtus_ochrogaster
ENSELUG00000000181	skiv2l	99	81.318	ENSMMOG00000014547	skiv2l	99	81.318	Mola_mola
ENSELUG00000000181	skiv2l	99	65.248	ENSMODG00000015052	SKIV2L	99	61.374	Monodelphis_domestica
ENSELUG00000000181	skiv2l	96	87.267	ENSMALG00000010535	skiv2l	99	80.720	Monopterus_albus
ENSELUG00000000181	skiv2l	94	65.909	MGP_CAROLIEiJ_G0021477	Skiv2l	99	59.605	Mus_caroli
ENSELUG00000000181	skiv2l	94	66.218	ENSMUSG00000040356	Skiv2l	99	59.905	Mus_musculus
ENSELUG00000000181	skiv2l	94	66.736	MGP_PahariEiJ_G0020472	Skiv2l	99	60.285	Mus_pahari
ENSELUG00000000181	skiv2l	94	66.010	MGP_SPRETEiJ_G0022382	Skiv2l	99	59.746	Mus_spretus
ENSELUG00000000181	skiv2l	94	66.494	ENSMPUG00000010567	SKIV2L	99	60.206	Mustela_putorius_furo
ENSELUG00000000181	skiv2l	94	66.081	ENSMLUG00000000628	SKIV2L	99	59.984	Myotis_lucifugus
ENSELUG00000000181	skiv2l	99	81.687	ENSNBRG00000018650	skiv2l	99	81.847	Neolamprologus_brichardi
ENSELUG00000000181	skiv2l	94	65.940	ENSNLEG00000006451	SKIV2L	100	59.395	Nomascus_leucogenys
ENSELUG00000000181	skiv2l	78	62.832	ENSMEUG00000006072	SKIV2L	78	62.832	Notamacropus_eugenii
ENSELUG00000000181	skiv2l	94	66.081	ENSOPRG00000003972	SKIV2L	99	59.921	Ochotona_princeps
ENSELUG00000000181	skiv2l	94	66.287	ENSODEG00000017516	SKIV2L	99	59.921	Octodon_degus
ENSELUG00000000181	skiv2l	99	87.703	ENSONIG00000013500	skiv2l	100	84.800	Oreochromis_niloticus
ENSELUG00000000181	skiv2l	94	66.909	ENSOCUG00000007019	SKIV2L	99	60.616	Oryctolagus_cuniculus
ENSELUG00000000181	skiv2l	97	87.080	ENSORLG00000002021	skiv2l	100	83.200	Oryzias_latipes
ENSELUG00000000181	skiv2l	97	86.979	ENSORLG00020009462	skiv2l	100	83.120	Oryzias_latipes_hni
ENSELUG00000000181	skiv2l	97	86.802	ENSORLG00015016750	skiv2l	100	83.293	Oryzias_latipes_hsok
ENSELUG00000000181	skiv2l	100	83.866	ENSOMEG00000008531	skiv2l	100	83.866	Oryzias_melastigma
ENSELUG00000000181	skiv2l	94	66.805	ENSOGAG00000009578	SKIV2L	99	60.522	Otolemur_garnettii
ENSELUG00000000181	skiv2l	94	62.755	ENSOARG00000002411	-	99	56.723	Ovis_aries
ENSELUG00000000181	skiv2l	94	66.222	ENSPPAG00000040211	SKIV2L	100	59.937	Pan_paniscus
ENSELUG00000000181	skiv2l	94	66.908	ENSPPRG00000005017	SKIV2L	99	60.601	Panthera_pardus
ENSELUG00000000181	skiv2l	94	66.391	ENSPTIG00000021656	SKIV2L	99	60.206	Panthera_tigris_altaica
ENSELUG00000000181	skiv2l	94	66.805	ENSPTRG00000017997	SKIV2L	99	60.316	Pan_troglodytes
ENSELUG00000000181	skiv2l	93	66.183	ENSPANG00000011501	SKIV2L	100	59.479	Papio_anubis
ENSELUG00000000181	skiv2l	98	82.046	ENSPKIG00000011876	skiv2l	100	79.048	Paramormyrops_kingsleyae
ENSELUG00000000181	skiv2l	99	82.249	ENSPMGG00000019707	skiv2l	99	82.169	Periophthalmus_magnuspinnatus
ENSELUG00000000181	skiv2l	94	66.425	ENSPEMG00000019001	Skiv2l	99	60.206	Peromyscus_maniculatus_bairdii
ENSELUG00000000181	skiv2l	96	67.184	ENSPCIG00000018792	SKIV2L	99	61.326	Phascolarctos_cinereus
ENSELUG00000000181	skiv2l	99	86.741	ENSPFOG00000002424	skiv2l	100	84.640	Poecilia_formosa
ENSELUG00000000181	skiv2l	99	86.842	ENSPLAG00000018304	skiv2l	100	84.480	Poecilia_latipinna
ENSELUG00000000181	skiv2l	99	86.741	ENSPMEG00000006997	skiv2l	100	84.800	Poecilia_mexicana
ENSELUG00000000181	skiv2l	98	81.397	ENSPREG00000002277	skiv2l	99	81.818	Poecilia_reticulata
ENSELUG00000000181	skiv2l	94	66.391	ENSPPYG00000016472	SKIV2L	99	60.000	Pongo_abelii
ENSELUG00000000181	skiv2l	78	76.316	ENSPCAG00000004178	SKIV2L	74	76.316	Procavia_capensis
ENSELUG00000000181	skiv2l	94	67.012	ENSPCOG00000010308	SKIV2L	99	60.553	Propithecus_coquereli
ENSELUG00000000181	skiv2l	94	66.805	ENSPVAG00000005136	SKIV2L	99	60.616	Pteropus_vampyrus
ENSELUG00000000181	skiv2l	96	85.166	ENSPNYG00000017853	skiv2l	99	85.166	Pundamilia_nyererei
ENSELUG00000000181	skiv2l	99	83.832	ENSPNAG00000011823	skiv2l	100	83.799	Pygocentrus_nattereri
ENSELUG00000000181	skiv2l	94	66.322	ENSRNOG00000000421	Skiv2l	99	60.143	Rattus_norvegicus
ENSELUG00000000181	skiv2l	94	65.535	ENSRBIG00000035485	SKIV2L	99	59.385	Rhinopithecus_bieti
ENSELUG00000000181	skiv2l	94	67.012	ENSRROG00000036429	SKIV2L	99	60.443	Rhinopithecus_roxellana
ENSELUG00000000181	skiv2l	90	39.485	YLR398C	-	90	39.751	Saccharomyces_cerevisiae
ENSELUG00000000181	skiv2l	94	66.701	ENSSBOG00000027920	SKIV2L	99	60.632	Saimiri_boliviensis_boliviensis
ENSELUG00000000181	skiv2l	96	67.288	ENSSHAG00000008963	SKIV2L	99	60.269	Sarcophilus_harrisii
ENSELUG00000000181	skiv2l	97	84.919	ENSSFOG00015016930	skiv2l	100	81.419	Scleropages_formosus
ENSELUG00000000181	skiv2l	100	85.463	ENSSMAG00000020185	skiv2l	100	85.703	Scophthalmus_maximus
ENSELUG00000000181	skiv2l	100	85.851	ENSSDUG00000019977	skiv2l	100	85.942	Seriola_dumerili
ENSELUG00000000181	skiv2l	99	79.967	ENSSLDG00000024382	skiv2l	99	79.967	Seriola_lalandi_dorsalis
ENSELUG00000000181	skiv2l	96	64.588	ENSSPUG00000012945	SKIV2L	99	59.783	Sphenodon_punctatus
ENSELUG00000000181	skiv2l	95	84.557	ENSSPAG00000012904	skiv2l	99	84.557	Stegastes_partitus
ENSELUG00000000181	skiv2l	95	66.598	ENSSSCG00000001424	SKIV2L	99	60.364	Sus_scrofa
ENSELUG00000000181	skiv2l	73	84.492	ENSTRUG00000000966	skiv2l	100	67.195	Takifugu_rubripes
ENSELUG00000000181	skiv2l	98	84.221	ENSTNIG00000004382	skiv2l	99	80.223	Tetraodon_nigroviridis
ENSELUG00000000181	skiv2l	88	80.519	ENSTBEG00000003462	SKIV2L	85	77.500	Tupaia_belangeri
ENSELUG00000000181	skiv2l	94	61.634	ENSTTRG00000005931	SKIV2L	99	56.443	Tursiops_truncatus
ENSELUG00000000181	skiv2l	94	66.598	ENSUAMG00000024336	SKIV2L	99	60.285	Ursus_americanus
ENSELUG00000000181	skiv2l	89	66.494	ENSUMAG00000012666	SKIV2L	99	61.722	Ursus_maritimus
ENSELUG00000000181	skiv2l	94	66.287	ENSVVUG00000022807	SKIV2L	99	60.238	Vulpes_vulpes
ENSELUG00000000181	skiv2l	99	58.991	ENSXETG00000010932	skiv2l	99	58.991	Xenopus_tropicalis
ENSELUG00000000181	skiv2l	99	83.467	ENSXCOG00000019517	skiv2l	97	83.868	Xiphophorus_couchianus
ENSELUG00000000181	skiv2l	100	84.147	ENSXMAG00000014079	skiv2l	100	84.548	Xiphophorus_maculatus