EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000000256 (Gene tree)
Gene ID: 106024546
Gene Symbol: -
Alias: zgc:85812
Full Name: protein LSM12 homolog A-like
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 7561 bases
Position: chrLG11:6985180-6992740
Accession: 106024546
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000030097	AD	PF09793.9	6.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000009176	-	899	XM_013136038	ENSELUP00000030097	196 (aa)	XP_012991492	UPI000661EB91

Gene Model

Click here to download ENSELUG00000000256's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000000256's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000000256	-	100	93.367	ENSELUG00000015538	lsm12b	100	88.776

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000000256	-	100	82.143	ENSG00000161654	LSM12	100	82.143	Homo_sapiens
ENSELUG00000000256	-	100	93.367	ENSAPOG00000007907	lsm12b	100	93.367	Acanthochromis_polyacanthus
ENSELUG00000000256	-	100	80.402	ENSAMEG00000018321	LSM12	100	80.402	Ailuropoda_melanoleuca
ENSELUG00000000256	-	100	90.816	ENSACIG00000008538	lsm12b	100	90.816	Amphilophus_citrinellus
ENSELUG00000000256	-	100	92.857	ENSAOCG00000021847	lsm12b	88	92.857	Amphiprion_ocellaris
ENSELUG00000000256	-	100	92.857	ENSAPEG00000002252	lsm12b	100	92.857	Amphiprion_percula
ENSELUG00000000256	-	100	91.327	ENSATEG00000005705	lsm12b	100	91.327	Anabas_testudineus
ENSELUG00000000256	-	100	81.633	ENSACAG00000004618	LSM12	100	81.633	Anolis_carolinensis
ENSELUG00000000256	-	100	82.143	ENSANAG00000029011	LSM12	100	82.143	Aotus_nancymaae
ENSELUG00000000256	-	100	91.327	ENSACLG00000026332	lsm12b	100	91.327	Astatotilapia_calliptera
ENSELUG00000000256	-	100	84.694	ENSAMXG00000036117	lsm12a	91	84.694	Astyanax_mexicanus
ENSELUG00000000256	-	100	89.286	ENSAMXG00000032952	lsm12b	100	89.286	Astyanax_mexicanus
ENSELUG00000000256	-	100	82.143	ENSBTAG00000016252	LSM12	100	82.143	Bos_taurus
ENSELUG00000000256	-	100	82.143	ENSCJAG00000048480	LSM12	100	82.143	Callithrix_jacchus
ENSELUG00000000256	-	100	82.143	ENSCAFG00000014379	LSM12	92	82.143	Canis_familiaris
ENSELUG00000000256	-	100	82.143	ENSCAFG00020012173	LSM12	100	82.143	Canis_lupus_dingo
ENSELUG00000000256	-	100	82.143	ENSCHIG00000018175	LSM12	100	82.143	Capra_hircus
ENSELUG00000000256	-	100	82.143	ENSTSYG00000036361	LSM12	100	82.143	Carlito_syrichta
ENSELUG00000000256	-	83	77.778	ENSCAPG00000009647	LSM12	89	77.778	Cavia_aperea
ENSELUG00000000256	-	100	81.122	ENSCPOG00000012860	LSM12	100	81.122	Cavia_porcellus
ENSELUG00000000256	-	100	82.143	ENSCCAG00000032905	LSM12	100	82.143	Cebus_capucinus
ENSELUG00000000256	-	100	82.143	ENSCATG00000030577	-	100	82.143	Cercocebus_atys
ENSELUG00000000256	-	100	81.633	ENSCLAG00000015759	LSM12	100	81.633	Chinchilla_lanigera
ENSELUG00000000256	-	100	82.653	ENSCSAG00000003486	LSM12	100	82.653	Chlorocebus_sabaeus
ENSELUG00000000256	-	56	83.486	ENSCHOG00000001198	LSM12	100	83.486	Choloepus_hoffmanni
ENSELUG00000000256	-	100	82.653	ENSCPBG00000027105	LSM12	100	82.653	Chrysemys_picta_bellii
ENSELUG00000000256	-	100	82.143	ENSCANG00000043328	LSM12	100	82.143	Colobus_angolensis_palliatus
ENSELUG00000000256	-	100	82.143	ENSCGRG00001002094	Lsm12	100	82.143	Cricetulus_griseus_chok1gshd
ENSELUG00000000256	-	89	74.138	ENSCGRG00000004316	Lsm12	98	74.138	Cricetulus_griseus_crigri
ENSELUG00000000256	-	100	91.327	ENSCSEG00000008434	lsm12b	100	91.327	Cynoglossus_semilaevis
ENSELUG00000000256	-	100	93.367	ENSCVAG00000008755	lsm12b	100	93.367	Cyprinodon_variegatus
ENSELUG00000000256	-	100	85.204	ENSDARG00000028848	lsm12a	100	85.204	Danio_rerio
ENSELUG00000000256	-	100	90.306	ENSDARG00000109510	lsm12b	100	90.306	Danio_rerio
ENSELUG00000000256	-	100	82.653	ENSDNOG00000002418	LSM12	91	82.653	Dasypus_novemcinctus
ENSELUG00000000256	-	100	82.143	ENSDORG00000016381	Lsm12	100	82.143	Dipodomys_ordii
ENSELUG00000000256	-	83	33.133	FBgn0030364	Lsm12	76	33.133	Drosophila_melanogaster
ENSELUG00000000256	-	73	31.013	FBgn0036057	CG14164	83	31.013	Drosophila_melanogaster
ENSELUG00000000256	-	100	81.633	ENSETEG00000008374	LSM12	100	81.633	Echinops_telfairi
ENSELUG00000000256	-	88	72.254	ENSETEG00000011012	-	99	72.254	Echinops_telfairi
ENSELUG00000000256	-	85	65.868	ENSEBUG00000016299	lsm12a	92	65.868	Eptatretus_burgeri
ENSELUG00000000256	-	100	82.143	ENSEASG00005010155	LSM12	100	82.143	Equus_asinus_asinus
ENSELUG00000000256	-	100	82.143	ENSECAG00000009071	LSM12	100	82.143	Equus_caballus
ENSELUG00000000256	-	78	81.046	ENSEEUG00000002419	-	100	81.046	Erinaceus_europaeus
ENSELUG00000000256	-	100	82.143	ENSFCAG00000037021	LSM12	100	82.143	Felis_catus
ENSELUG00000000256	-	76	82.432	ENSFDAG00000008954	LSM12	87	82.432	Fukomys_damarensis
ENSELUG00000000256	-	100	92.347	ENSFHEG00000019913	lsm12b	100	92.347	Fundulus_heteroclitus
ENSELUG00000000256	-	81	91.772	ENSGMOG00000015449	lsm12b	100	91.772	Gadus_morhua
ENSELUG00000000256	-	78	83.007	ENSGALG00000039803	LSM12	100	83.007	Gallus_gallus
ENSELUG00000000256	-	100	92.857	ENSGAFG00000011829	lsm12b	100	92.857	Gambusia_affinis
ENSELUG00000000256	-	81	92.405	ENSGACG00000003428	lsm12b	100	92.405	Gasterosteus_aculeatus
ENSELUG00000000256	-	100	81.633	ENSGAGG00000021965	LSM12	100	81.633	Gopherus_agassizii
ENSELUG00000000256	-	100	82.143	ENSGGOG00000010589	-	100	82.143	Gorilla_gorilla
ENSELUG00000000256	-	85	91.617	ENSHBUG00000007667	lsm12b	74	91.617	Haplochromis_burtoni
ENSELUG00000000256	-	100	82.143	ENSHGLG00000011411	LSM12	100	82.143	Heterocephalus_glaber_female
ENSELUG00000000256	-	79	81.169	ENSHGLG00100000241	LSM12	82	81.169	Heterocephalus_glaber_male
ENSELUG00000000256	-	100	91.327	ENSHCOG00000002094	lsm12b	100	91.327	Hippocampus_comes
ENSELUG00000000256	-	100	89.286	ENSIPUG00000014800	lsm12	100	89.286	Ictalurus_punctatus
ENSELUG00000000256	-	99	80.928	ENSIPUG00000008936	lsm12a	99	80.928	Ictalurus_punctatus
ENSELUG00000000256	-	100	82.143	ENSSTOG00000007403	LSM12	100	82.143	Ictidomys_tridecemlineatus
ENSELUG00000000256	-	100	82.143	ENSJJAG00000004364	-	100	84.545	Jaculus_jaculus
ENSELUG00000000256	-	80	70.440	ENSJJAG00000014652	-	95	70.440	Jaculus_jaculus
ENSELUG00000000256	-	96	73.684	ENSJJAG00000011793	-	100	73.684	Jaculus_jaculus
ENSELUG00000000256	-	85	92.814	ENSKMAG00000007704	lsm12b	56	92.814	Kryptolebias_marmoratus
ENSELUG00000000256	-	100	93.367	ENSLBEG00000027999	lsm12b	100	93.367	Labrus_bergylta
ENSELUG00000000256	-	100	83.673	ENSLACG00000015981	LSM12	100	83.673	Latimeria_chalumnae
ENSELUG00000000256	-	100	88.776	ENSLOCG00000013079	lsm12b	99	88.776	Lepisosteus_oculatus
ENSELUG00000000256	-	100	82.143	ENSLAFG00000005202	LSM12	100	82.143	Loxodonta_africana
ENSELUG00000000256	-	100	82.143	ENSMFAG00000031376	LSM12	100	82.143	Macaca_fascicularis
ENSELUG00000000256	-	100	82.143	ENSMMUG00000006804	LSM12	100	82.143	Macaca_mulatta
ENSELUG00000000256	-	65	72.414	ENSMMUG00000042106	-	100	72.414	Macaca_mulatta
ENSELUG00000000256	-	100	82.143	ENSMNEG00000030594	-	100	82.143	Macaca_nemestrina
ENSELUG00000000256	-	100	82.143	ENSMLEG00000039934	LSM12	100	82.143	Mandrillus_leucophaeus
ENSELUG00000000256	-	100	92.347	ENSMAMG00000004279	lsm12b	100	92.347	Mastacembelus_armatus
ENSELUG00000000256	-	100	91.327	ENSMZEG00005005754	lsm12b	100	91.327	Maylandia_zebra
ENSELUG00000000256	-	100	82.653	ENSMICG00000037219	LSM12	100	82.653	Microcebus_murinus
ENSELUG00000000256	-	100	82.143	ENSMOCG00000019878	-	100	82.143	Microtus_ochrogaster
ENSELUG00000000256	-	100	71.429	ENSMOCG00000017015	-	86	71.429	Microtus_ochrogaster
ENSELUG00000000256	-	100	92.857	ENSMMOG00000020848	lsm12b	100	92.857	Mola_mola
ENSELUG00000000256	-	100	92.347	ENSMALG00000007578	lsm12b	100	92.347	Monopterus_albus
ENSELUG00000000256	-	100	81.633	MGP_CAROLIEiJ_G0017241	Lsm12	100	81.633	Mus_caroli
ENSELUG00000000256	-	100	82.143	ENSMUSG00000020922	Lsm12	100	82.143	Mus_musculus
ENSELUG00000000256	-	100	75.587	MGP_PahariEiJ_G0018371	Lsm12	100	75.587	Mus_pahari
ENSELUG00000000256	-	100	81.633	MGP_SPRETEiJ_G0018084	Lsm12	100	81.633	Mus_spretus
ENSELUG00000000256	-	100	82.143	ENSMLUG00000006391	LSM12	100	82.143	Myotis_lucifugus
ENSELUG00000000256	-	100	82.143	ENSNGAG00000001870	Lsm12	100	82.143	Nannospalax_galili
ENSELUG00000000256	-	100	57.143	ENSNGAG00000015429	-	100	57.143	Nannospalax_galili
ENSELUG00000000256	-	100	91.327	ENSNBRG00000006266	lsm12b	100	91.327	Neolamprologus_brichardi
ENSELUG00000000256	-	100	82.143	ENSNLEG00000005580	-	100	82.143	Nomascus_leucogenys
ENSELUG00000000256	-	85	83.133	ENSMEUG00000007501	-	100	83.133	Notamacropus_eugenii
ENSELUG00000000256	-	100	82.143	ENSOPRG00000008552	LSM12	100	82.143	Ochotona_princeps
ENSELUG00000000256	-	100	76.020	ENSODEG00000007886	-	74	76.020	Octodon_degus
ENSELUG00000000256	-	99	81.959	ENSODEG00000017998	-	99	81.959	Octodon_degus
ENSELUG00000000256	-	100	91.327	ENSONIG00000007933	lsm12b	100	91.327	Oreochromis_niloticus
ENSELUG00000000256	-	99	76.923	ENSOCUG00000027889	-	100	76.923	Oryctolagus_cuniculus
ENSELUG00000000256	-	100	80.402	ENSOCUG00000008566	-	100	80.402	Oryctolagus_cuniculus
ENSELUG00000000256	-	99	76.923	ENSOCUG00000021254	-	100	76.923	Oryctolagus_cuniculus
ENSELUG00000000256	-	99	76.923	ENSOCUG00000024823	-	100	76.923	Oryctolagus_cuniculus
ENSELUG00000000256	-	100	92.347	ENSORLG00000011310	lsm12b	100	92.347	Oryzias_latipes
ENSELUG00000000256	-	100	92.347	ENSORLG00020002060	lsm12b	92	92.347	Oryzias_latipes_hni
ENSELUG00000000256	-	100	92.347	ENSORLG00015001647	lsm12b	92	92.347	Oryzias_latipes_hsok
ENSELUG00000000256	-	100	92.347	ENSOMEG00000006184	lsm12b	92	92.347	Oryzias_melastigma
ENSELUG00000000256	-	100	82.653	ENSOGAG00000010489	LSM12	100	82.653	Otolemur_garnettii
ENSELUG00000000256	-	100	79.208	ENSOARG00000006589	LSM12	100	79.208	Ovis_aries
ENSELUG00000000256	-	100	72.959	ENSPPAG00000034974	-	100	72.959	Pan_paniscus
ENSELUG00000000256	-	100	82.143	ENSPPRG00000023420	LSM12	100	82.143	Panthera_pardus
ENSELUG00000000256	-	78	81.699	ENSPTIG00000012704	-	82	81.699	Panthera_tigris_altaica
ENSELUG00000000256	-	72	81.818	ENSPTIG00000014850	-	100	81.818	Panthera_tigris_altaica
ENSELUG00000000256	-	100	82.143	ENSPTRG00000009261	LSM12	100	82.143	Pan_troglodytes
ENSELUG00000000256	-	100	82.143	ENSPANG00000021315	-	100	82.143	Papio_anubis
ENSELUG00000000256	-	100	90.816	ENSPKIG00000021058	lsm12b	100	90.816	Paramormyrops_kingsleyae
ENSELUG00000000256	-	100	82.143	ENSPKIG00000017932	-	100	82.143	Paramormyrops_kingsleyae
ENSELUG00000000256	-	100	91.327	ENSPMGG00000021344	lsm12b	100	91.327	Periophthalmus_magnuspinnatus
ENSELUG00000000256	-	100	82.143	ENSPEMG00000012199	Lsm12	100	82.143	Peromyscus_maniculatus_bairdii
ENSELUG00000000256	-	89	67.429	ENSPMAG00000005461	lsm12a	99	67.429	Petromyzon_marinus
ENSELUG00000000256	-	100	82.143	ENSPCIG00000020244	LSM12	100	82.143	Phascolarctos_cinereus
ENSELUG00000000256	-	100	91.837	ENSPFOG00000015930	lsm12b	100	91.837	Poecilia_formosa
ENSELUG00000000256	-	100	91.837	ENSPLAG00000021089	lsm12b	100	91.837	Poecilia_latipinna
ENSELUG00000000256	-	100	91.837	ENSPMEG00000012961	lsm12b	100	91.837	Poecilia_mexicana
ENSELUG00000000256	-	87	91.813	ENSPREG00000010236	lsm12b	95	91.813	Poecilia_reticulata
ENSELUG00000000256	-	100	82.143	ENSPPYG00000008344	LSM12	100	82.143	Pongo_abelii
ENSELUG00000000256	-	81	83.019	ENSPCAG00000008790	LSM12	100	83.019	Procavia_capensis
ENSELUG00000000256	-	100	82.143	ENSPCOG00000027951	LSM12	100	82.143	Propithecus_coquereli
ENSELUG00000000256	-	100	81.633	ENSPVAG00000013706	LSM12	100	81.633	Pteropus_vampyrus
ENSELUG00000000256	-	100	91.327	ENSPNYG00000003386	lsm12b	100	91.327	Pundamilia_nyererei
ENSELUG00000000256	-	100	83.163	ENSPNAG00000018435	lsm12a	100	83.163	Pygocentrus_nattereri
ENSELUG00000000256	-	100	88.265	ENSPNAG00000004186	lsm12b	100	88.265	Pygocentrus_nattereri
ENSELUG00000000256	-	100	82.143	ENSRNOG00000020894	Lsm12	100	82.143	Rattus_norvegicus
ENSELUG00000000256	-	100	82.143	ENSRBIG00000027910	LSM12	100	82.143	Rhinopithecus_bieti
ENSELUG00000000256	-	99	52.062	ENSRROG00000000537	-	99	52.062	Rhinopithecus_roxellana
ENSELUG00000000256	-	100	82.143	ENSRROG00000045530	-	100	82.143	Rhinopithecus_roxellana
ENSELUG00000000256	-	100	82.143	ENSSBOG00000025310	LSM12	100	82.143	Saimiri_boliviensis_boliviensis
ENSELUG00000000256	-	81	80.380	ENSSHAG00000014914	LSM12	100	80.380	Sarcophilus_harrisii
ENSELUG00000000256	-	100	91.327	ENSSFOG00015020392	lsm12a	100	91.327	Scleropages_formosus
ENSELUG00000000256	-	100	90.306	ENSSFOG00015009612	lsm12	100	90.306	Scleropages_formosus
ENSELUG00000000256	-	100	92.347	ENSSMAG00000008089	lsm12b	100	92.347	Scophthalmus_maximus
ENSELUG00000000256	-	100	92.347	ENSSDUG00000012711	lsm12b	100	92.347	Seriola_dumerili
ENSELUG00000000256	-	100	92.347	ENSSLDG00000007404	lsm12b	100	92.347	Seriola_lalandi_dorsalis
ENSELUG00000000256	-	78	81.046	ENSSARG00000005537	LSM12	100	81.046	Sorex_araneus
ENSELUG00000000256	-	100	82.653	ENSSPUG00000011984	LSM12	100	82.653	Sphenodon_punctatus
ENSELUG00000000256	-	100	92.857	ENSSPAG00000017058	lsm12b	100	92.857	Stegastes_partitus
ENSELUG00000000256	-	100	82.143	ENSSSCG00000032394	LSM12	100	82.143	Sus_scrofa
ENSELUG00000000256	-	100	92.347	ENSTRUG00000007121	lsm12b	100	92.347	Takifugu_rubripes
ENSELUG00000000256	-	100	91.327	ENSTNIG00000014436	lsm12b	100	91.327	Tetraodon_nigroviridis
ENSELUG00000000256	-	100	80.102	ENSTBEG00000012392	-	100	80.102	Tupaia_belangeri
ENSELUG00000000256	-	100	82.143	ENSTBEG00000012523	-	100	82.143	Tupaia_belangeri
ENSELUG00000000256	-	100	82.143	ENSTTRG00000010433	LSM12	100	82.143	Tursiops_truncatus
ENSELUG00000000256	-	100	82.143	ENSUAMG00000006313	LSM12	100	82.143	Ursus_americanus
ENSELUG00000000256	-	81	79.114	ENSUMAG00000012987	LSM12	90	79.114	Ursus_maritimus
ENSELUG00000000256	-	100	77.551	ENSVPAG00000011145	LSM12	100	77.551	Vicugna_pacos
ENSELUG00000000256	-	100	82.143	ENSVVUG00000017581	LSM12	100	82.143	Vulpes_vulpes
ENSELUG00000000256	-	82	59.375	ENSXETG00000003371	lsm12	77	59.375	Xenopus_tropicalis
ENSELUG00000000256	-	100	92.857	ENSXCOG00000003994	lsm12b	100	92.857	Xiphophorus_couchianus
ENSELUG00000000256	-	100	92.857	ENSXMAG00000020950	lsm12b	100	92.857	Xiphophorus_maculatus