EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000000319 (Gene tree)
Gene ID: 105025769
Gene Symbol: polr2f
Alias: RPAB2
Full Name: RNA polymerase II subunit F
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 8191 bases
Position: chrLG11:6310398-6318588
Accession: 105025769
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000007670	RNA_pol_Rpb6	PF01192.22	9.1e-15	1	1
ENSELUP00000030990	RNA_pol_Rpb6	PF01192.22	9.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000006873	-	1036	-	ENSELUP00000007670	127 (aa)	-	C1BXK5
ENSELUT00000006895	-	710	-	ENSELUP00000030990	127 (aa)	-	C1BXK5

Gene Model

Click here to download ENSELUG00000000319's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03020	RNA polymerase	KEGG
els04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000000319's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000000319	polr2f	100	87.402	ENSG00000100142	POLR2F	100	87.402	Homo_sapiens
ENSELUG00000000319	polr2f	100	95.276	ENSAPOG00000002902	polr2f	100	95.276	Acanthochromis_polyacanthus
ENSELUG00000000319	polr2f	100	86.614	ENSAMEG00000010331	POLR2F	100	86.614	Ailuropoda_melanoleuca
ENSELUG00000000319	polr2f	100	96.850	ENSACIG00000000923	polr2f	100	96.850	Amphilophus_citrinellus
ENSELUG00000000319	polr2f	100	96.063	ENSAOCG00000003182	polr2f	100	96.063	Amphiprion_ocellaris
ENSELUG00000000319	polr2f	100	96.063	ENSAPEG00000012999	polr2f	100	96.063	Amphiprion_percula
ENSELUG00000000319	polr2f	100	96.850	ENSATEG00000008929	polr2f	100	96.850	Anabas_testudineus
ENSELUG00000000319	polr2f	80	88.119	ENSAPLG00000015235	POLR2F	85	87.736	Anas_platyrhynchos
ENSELUG00000000319	polr2f	100	87.402	ENSACAG00000015288	POLR2F	100	87.402	Anolis_carolinensis
ENSELUG00000000319	polr2f	100	87.402	ENSANAG00000020840	POLR2F	100	87.402	Aotus_nancymaae
ENSELUG00000000319	polr2f	100	96.063	ENSACLG00000016129	polr2f	100	96.063	Astatotilapia_calliptera
ENSELUG00000000319	polr2f	100	94.488	ENSAMXG00000012812	polr2f	100	94.488	Astyanax_mexicanus
ENSELUG00000000319	polr2f	100	87.402	ENSBTAG00000004820	POLR2F	100	87.402	Bos_taurus
ENSELUG00000000319	polr2f	63	77.500	WBGene00007355	rpb-6	73	68.317	Caenorhabditis_elegans
ENSELUG00000000319	polr2f	100	87.402	ENSCJAG00000048241	POLR2F	100	87.402	Callithrix_jacchus
ENSELUG00000000319	polr2f	100	86.614	ENSCAFG00000001437	POLR2F	100	86.614	Canis_familiaris
ENSELUG00000000319	polr2f	83	89.623	ENSCHIG00000012907	POLR2F	83	89.623	Capra_hircus
ENSELUG00000000319	polr2f	100	86.614	ENSTSYG00000008187	POLR2F	100	86.614	Carlito_syrichta
ENSELUG00000000319	polr2f	83	89.623	ENSCAPG00000013419	POLR2F	83	89.623	Cavia_aperea
ENSELUG00000000319	polr2f	100	87.402	ENSCPOG00000034094	POLR2F	100	87.402	Cavia_porcellus
ENSELUG00000000319	polr2f	100	87.402	ENSCCAG00000036489	POLR2F	100	87.402	Cebus_capucinus
ENSELUG00000000319	polr2f	100	87.402	ENSCATG00000041014	POLR2F	100	87.402	Cercocebus_atys
ENSELUG00000000319	polr2f	100	87.402	ENSCLAG00000017167	POLR2F	100	87.402	Chinchilla_lanigera
ENSELUG00000000319	polr2f	100	87.402	ENSCSAG00000006862	POLR2F	100	87.402	Chlorocebus_sabaeus
ENSELUG00000000319	polr2f	83	89.623	ENSCPBG00000023030	POLR2F	54	89.623	Chrysemys_picta_bellii
ENSELUG00000000319	polr2f	81	75.962	ENSCING00000019359	-	73	75.962	Ciona_intestinalis
ENSELUG00000000319	polr2f	100	87.402	ENSCANG00000041884	POLR2F	100	87.402	Colobus_angolensis_palliatus
ENSELUG00000000319	polr2f	100	87.402	ENSCGRG00001023541	POLR2F	100	87.402	Cricetulus_griseus_chok1gshd
ENSELUG00000000319	polr2f	100	87.402	ENSCGRG00000011921	POLR2F	100	87.402	Cricetulus_griseus_crigri
ENSELUG00000000319	polr2f	94	97.500	ENSCSEG00000006848	polr2f	94	97.500	Cynoglossus_semilaevis
ENSELUG00000000319	polr2f	100	94.488	ENSCVAG00000010437	polr2f	100	94.488	Cyprinodon_variegatus
ENSELUG00000000319	polr2f	100	92.126	ENSDARG00000036625	polr2f	100	92.126	Danio_rerio
ENSELUG00000000319	polr2f	100	87.402	ENSDNOG00000005884	POLR2F	100	87.402	Dasypus_novemcinctus
ENSELUG00000000319	polr2f	100	87.402	ENSDORG00000024789	Polr2f	100	87.402	Dipodomys_ordii
ENSELUG00000000319	polr2f	63	85.000	FBgn0003275	RpII18	89	65.812	Drosophila_melanogaster
ENSELUG00000000319	polr2f	77	67.347	ENSEBUG00000002842	-	90	64.423	Eptatretus_burgeri
ENSELUG00000000319	polr2f	56	78.873	ENSEBUG00000008509	polr2f	73	78.873	Eptatretus_burgeri
ENSELUG00000000319	polr2f	60	86.842	ENSEASG00005018802	-	68	86.842	Equus_asinus_asinus
ENSELUG00000000319	polr2f	100	85.039	ENSEEUG00000011014	POLR2F	100	85.039	Erinaceus_europaeus
ENSELUG00000000319	polr2f	100	86.614	ENSFCAG00000002806	POLR2F	100	86.614	Felis_catus
ENSELUG00000000319	polr2f	100	87.402	ENSFDAG00000009926	POLR2F	100	87.402	Fukomys_damarensis
ENSELUG00000000319	polr2f	88	95.536	ENSFHEG00000005448	polr2f	84	95.283	Fundulus_heteroclitus
ENSELUG00000000319	polr2f	100	86.614	ENSGMOG00000009967	polr2f	100	86.614	Gadus_morhua
ENSELUG00000000319	polr2f	100	87.402	ENSGALG00000012291	POLR2F	100	87.402	Gallus_gallus
ENSELUG00000000319	polr2f	100	93.701	ENSGAFG00000017573	polr2f	100	93.701	Gambusia_affinis
ENSELUG00000000319	polr2f	100	89.764	ENSGACG00000007322	polr2f	100	89.764	Gasterosteus_aculeatus
ENSELUG00000000319	polr2f	100	87.402	ENSGAGG00000021757	POLR2F	100	87.402	Gopherus_agassizii
ENSELUG00000000319	polr2f	100	87.402	ENSGGOG00000005213	POLR2F	100	87.402	Gorilla_gorilla
ENSELUG00000000319	polr2f	100	96.063	ENSHBUG00000022089	polr2f	100	96.063	Haplochromis_burtoni
ENSELUG00000000319	polr2f	100	87.402	ENSHGLG00000018942	POLR2F	100	87.402	Heterocephalus_glaber_female
ENSELUG00000000319	polr2f	100	87.402	ENSHGLG00100012851	POLR2F	100	87.402	Heterocephalus_glaber_male
ENSELUG00000000319	polr2f	100	93.701	ENSHCOG00000006149	polr2f	100	93.701	Hippocampus_comes
ENSELUG00000000319	polr2f	76	96.907	ENSIPUG00000000814	polr2f	100	96.907	Ictalurus_punctatus
ENSELUG00000000319	polr2f	100	87.402	ENSSTOG00000025722	POLR2F	100	87.402	Ictidomys_tridecemlineatus
ENSELUG00000000319	polr2f	100	87.402	ENSJJAG00000008097	Polr2f	100	87.402	Jaculus_jaculus
ENSELUG00000000319	polr2f	100	93.701	ENSKMAG00000014230	polr2f	100	93.701	Kryptolebias_marmoratus
ENSELUG00000000319	polr2f	83	95.283	ENSLBEG00000008383	polr2f	88	95.283	Labrus_bergylta
ENSELUG00000000319	polr2f	100	88.976	ENSLACG00000003931	POLR2F	100	88.976	Latimeria_chalumnae
ENSELUG00000000319	polr2f	100	92.308	ENSLOCG00000011827	polr2f	100	92.308	Lepisosteus_oculatus
ENSELUG00000000319	polr2f	100	87.402	ENSLAFG00000012632	POLR2F	100	87.402	Loxodonta_africana
ENSELUG00000000319	polr2f	100	87.402	ENSMFAG00000033687	POLR2F	100	87.402	Macaca_fascicularis
ENSELUG00000000319	polr2f	83	89.623	ENSMMUG00000038231	POLR2F	87	89.623	Macaca_mulatta
ENSELUG00000000319	polr2f	100	87.402	ENSMNEG00000044365	POLR2F	100	87.402	Macaca_nemestrina
ENSELUG00000000319	polr2f	100	87.402	ENSMLEG00000033077	POLR2F	100	87.402	Mandrillus_leucophaeus
ENSELUG00000000319	polr2f	100	94.488	ENSMAMG00000008056	polr2f	100	94.488	Mastacembelus_armatus
ENSELUG00000000319	polr2f	100	96.063	ENSMZEG00005005705	polr2f	100	96.063	Maylandia_zebra
ENSELUG00000000319	polr2f	100	87.402	ENSMGAG00000012504	POLR2F	100	87.402	Meleagris_gallopavo
ENSELUG00000000319	polr2f	100	87.402	ENSMAUG00000018586	Polr2f	100	87.402	Mesocricetus_auratus
ENSELUG00000000319	polr2f	100	87.402	ENSMICG00000013128	POLR2F	100	87.402	Microcebus_murinus
ENSELUG00000000319	polr2f	100	87.402	ENSMOCG00000000237	Polr2f	100	87.402	Microtus_ochrogaster
ENSELUG00000000319	polr2f	100	96.063	ENSMMOG00000005106	polr2f	100	96.063	Mola_mola
ENSELUG00000000319	polr2f	100	86.614	ENSMODG00000019063	POLR2F	100	86.614	Monodelphis_domestica
ENSELUG00000000319	polr2f	100	95.276	ENSMALG00000001444	polr2f	100	95.276	Monopterus_albus
ENSELUG00000000319	polr2f	100	86.614	MGP_CAROLIEiJ_G0020006	Polr2f	100	86.614	Mus_caroli
ENSELUG00000000319	polr2f	100	86.614	ENSMUSG00000033020	Polr2f	100	86.614	Mus_musculus
ENSELUG00000000319	polr2f	100	86.614	MGP_PahariEiJ_G0020008	Polr2f	100	86.614	Mus_pahari
ENSELUG00000000319	polr2f	100	86.614	MGP_SPRETEiJ_G0020904	Polr2f	100	86.614	Mus_spretus
ENSELUG00000000319	polr2f	100	86.614	ENSMPUG00000012997	POLR2F	100	86.614	Mustela_putorius_furo
ENSELUG00000000319	polr2f	98	81.452	ENSMLUG00000029612	-	98	81.452	Myotis_lucifugus
ENSELUG00000000319	polr2f	100	85.271	ENSMLUG00000014315	-	100	85.271	Myotis_lucifugus
ENSELUG00000000319	polr2f	100	87.402	ENSNGAG00000020682	Polr2f	100	87.402	Nannospalax_galili
ENSELUG00000000319	polr2f	100	96.850	ENSNBRG00000002492	polr2f	100	96.850	Neolamprologus_brichardi
ENSELUG00000000319	polr2f	100	87.402	ENSNLEG00000014987	-	100	87.402	Nomascus_leucogenys
ENSELUG00000000319	polr2f	100	87.402	ENSODEG00000014123	POLR2F	100	87.402	Octodon_degus
ENSELUG00000000319	polr2f	100	96.850	ENSONIG00000008394	polr2f	100	96.850	Oreochromis_niloticus
ENSELUG00000000319	polr2f	100	87.402	ENSOANG00000014684	POLR2F	100	87.402	Ornithorhynchus_anatinus
ENSELUG00000000319	polr2f	100	87.402	ENSOCUG00000012064	POLR2F	100	87.402	Oryctolagus_cuniculus
ENSELUG00000000319	polr2f	100	93.701	ENSORLG00000014580	polr2f	100	93.701	Oryzias_latipes
ENSELUG00000000319	polr2f	100	94.488	ENSORLG00020006910	polr2f	100	94.488	Oryzias_latipes_hni
ENSELUG00000000319	polr2f	90	92.105	ENSORLG00015015332	polr2f	77	92.105	Oryzias_latipes_hsok
ENSELUG00000000319	polr2f	80	92.157	ENSOMEG00000006530	polr2f	65	86.364	Oryzias_melastigma
ENSELUG00000000319	polr2f	100	87.402	ENSOGAG00000025463	POLR2F	100	87.402	Otolemur_garnettii
ENSELUG00000000319	polr2f	100	87.402	ENSOARG00000014692	POLR2F	100	87.402	Ovis_aries
ENSELUG00000000319	polr2f	100	87.402	ENSPPAG00000024276	POLR2F	100	87.402	Pan_paniscus
ENSELUG00000000319	polr2f	100	86.614	ENSPPRG00000013030	POLR2F	100	86.614	Panthera_pardus
ENSELUG00000000319	polr2f	82	89.423	ENSPTIG00000000632	POLR2F	85	89.423	Panthera_tigris_altaica
ENSELUG00000000319	polr2f	100	87.402	ENSPTRG00000014356	POLR2F	100	87.402	Pan_troglodytes
ENSELUG00000000319	polr2f	100	87.402	ENSPANG00000023979	POLR2F	100	87.402	Papio_anubis
ENSELUG00000000319	polr2f	100	94.488	ENSPKIG00000002464	polr2f	100	94.488	Paramormyrops_kingsleyae
ENSELUG00000000319	polr2f	56	95.775	ENSPSIG00000013913	POLR2F	100	95.775	Pelodiscus_sinensis
ENSELUG00000000319	polr2f	100	96.063	ENSPMGG00000009619	polr2f	100	96.063	Periophthalmus_magnuspinnatus
ENSELUG00000000319	polr2f	100	87.402	ENSPEMG00000008322	Polr2f	100	87.402	Peromyscus_maniculatus_bairdii
ENSELUG00000000319	polr2f	100	86.614	ENSPCIG00000012000	-	100	86.614	Phascolarctos_cinereus
ENSELUG00000000319	polr2f	100	94.488	ENSPFOG00000000139	polr2f	100	94.488	Poecilia_formosa
ENSELUG00000000319	polr2f	100	94.488	ENSPLAG00000000988	polr2f	100	94.488	Poecilia_latipinna
ENSELUG00000000319	polr2f	100	94.488	ENSPMEG00000019063	polr2f	100	94.488	Poecilia_mexicana
ENSELUG00000000319	polr2f	77	94.898	ENSPREG00000016749	polr2f	100	94.898	Poecilia_reticulata
ENSELUG00000000319	polr2f	100	87.402	ENSPPYG00000011809	POLR2F	100	87.402	Pongo_abelii
ENSELUG00000000319	polr2f	100	87.402	ENSPCOG00000025716	POLR2F	100	87.402	Propithecus_coquereli
ENSELUG00000000319	polr2f	79	84.000	ENSPVAG00000010107	POLR2F	64	84.000	Pteropus_vampyrus
ENSELUG00000000319	polr2f	100	96.063	ENSPNYG00000019790	polr2f	100	96.063	Pundamilia_nyererei
ENSELUG00000000319	polr2f	100	95.276	ENSPNAG00000009017	polr2f	100	95.276	Pygocentrus_nattereri
ENSELUG00000000319	polr2f	100	86.614	ENSRNOG00000011214	Polr2f	100	86.614	Rattus_norvegicus
ENSELUG00000000319	polr2f	100	87.402	ENSRBIG00000044878	POLR2F	100	87.402	Rhinopithecus_bieti
ENSELUG00000000319	polr2f	100	87.402	ENSRROG00000019586	POLR2F	100	87.402	Rhinopithecus_roxellana
ENSELUG00000000319	polr2f	100	87.402	ENSSBOG00000023340	POLR2F	100	87.402	Saimiri_boliviensis_boliviensis
ENSELUG00000000319	polr2f	100	86.614	ENSSHAG00000008502	POLR2F	100	86.614	Sarcophilus_harrisii
ENSELUG00000000319	polr2f	100	95.276	ENSSFOG00015012810	polr2f	100	95.276	Scleropages_formosus
ENSELUG00000000319	polr2f	100	95.276	ENSSMAG00000005354	polr2f	100	95.276	Scophthalmus_maximus
ENSELUG00000000319	polr2f	100	96.063	ENSSDUG00000016273	polr2f	100	96.063	Seriola_dumerili
ENSELUG00000000319	polr2f	100	96.063	ENSSLDG00000024895	polr2f	100	96.063	Seriola_lalandi_dorsalis
ENSELUG00000000319	polr2f	100	87.402	ENSSPUG00000011343	POLR2F	100	87.402	Sphenodon_punctatus
ENSELUG00000000319	polr2f	100	96.063	ENSSPAG00000019646	polr2f	100	96.063	Stegastes_partitus
ENSELUG00000000319	polr2f	100	86.614	ENSSSCG00000000116	POLR2F	100	86.614	Sus_scrofa
ENSELUG00000000319	polr2f	80	89.109	ENSTGUG00000010476	POLR2F	93	86.614	Taeniopygia_guttata
ENSELUG00000000319	polr2f	57	87.500	ENSTGUG00000016504	-	88	87.013	Taeniopygia_guttata
ENSELUG00000000319	polr2f	100	95.276	ENSTRUG00000021130	polr2f	71	95.276	Takifugu_rubripes
ENSELUG00000000319	polr2f	100	95.276	ENSTNIG00000010827	polr2f	100	95.276	Tetraodon_nigroviridis
ENSELUG00000000319	polr2f	79	84.000	ENSTTRG00000004817	POLR2F	64	84.000	Tursiops_truncatus
ENSELUG00000000319	polr2f	100	86.614	ENSUAMG00000020504	POLR2F	100	86.614	Ursus_americanus
ENSELUG00000000319	polr2f	100	86.614	ENSUMAG00000015052	POLR2F	100	86.614	Ursus_maritimus
ENSELUG00000000319	polr2f	83	88.679	ENSVVUG00000024021	POLR2F	80	88.679	Vulpes_vulpes
ENSELUG00000000319	polr2f	100	88.189	ENSXETG00000006346	polr2f	100	88.189	Xenopus_tropicalis
ENSELUG00000000319	polr2f	100	94.488	ENSXCOG00000015983	polr2f	100	94.488	Xiphophorus_couchianus
ENSELUG00000000319	polr2f	100	94.488	ENSXMAG00000001559	polr2f	100	94.488	Xiphophorus_maculatus