EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000000343 (Gene tree)
Gene ID: 105029478
Gene Symbol: ovol1a
Alias: ovol1|sb:cb956|zgc:171804
Full Name: putative transcription factor Ovo-like 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 9259 bases
Position: chrLG24:19167977-19177235
Accession: 105029478
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000008691	zf-C2H2	PF00096.26	1.1e-15	1	3
ENSELUP00000008691	zf-C2H2	PF00096.26	1.1e-15	2	3
ENSELUP00000008691	zf-C2H2	PF00096.26	1.1e-15	3	3
ENSELUP00000008691	zf-met	PF12874.7	6.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000005135	-	2913	XM_010902856	ENSELUP00000008691	340 (aa)	XP_010901158	UPI000577742B

Gene Model

Click here to download ENSELUG00000000343's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000000343's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000000343	ovol1a	98	43.149	ENSAMXG00000041879	ovol1b	88	45.338	Astyanax_mexicanus
ENSELUG00000000343	ovol1a	99	59.884	ENSAMXG00000011046	ovol1a	99	59.943	Astyanax_mexicanus
ENSELUG00000000343	ovol1a	94	48.589	ENSDARG00000078256	ovol1b	90	50.671	Danio_rerio
ENSELUG00000000343	ovol1a	98	62.537	ENSDARG00000076472	ovol1a	100	62.537	Danio_rerio
ENSELUG00000000343	ovol1a	100	55.978	ENSFHEG00000002773	-	100	56.793	Fundulus_heteroclitus
ENSELUG00000000343	ovol1a	69	76.471	ENSGACG00000018794	ovol1a	89	76.471	Gasterosteus_aculeatus
ENSELUG00000000343	ovol1a	99	59.605	ENSHCOG00000015860	ovol1a	99	59.605	Hippocampus_comes
ENSELUG00000000343	ovol1a	100	57.182	ENSKMAG00000002605	-	100	56.640	Kryptolebias_marmoratus
ENSELUG00000000343	ovol1a	99	57.609	ENSMAMG00000009768	ovol1a	100	57.766	Mastacembelus_armatus
ENSELUG00000000343	ovol1a	100	59.615	ENSMALG00000008421	ovol1a	100	59.615	Monopterus_albus
ENSELUG00000000343	ovol1a	99	58.046	ENSPKIG00000024718	ovol1a	99	57.759	Paramormyrops_kingsleyae
ENSELUG00000000343	ovol1a	99	56.131	ENSPFOG00000008841	-	100	87.879	Poecilia_formosa
ENSELUG00000000343	ovol1a	88	45.847	ENSPNAG00000016198	ovol1b	93	45.847	Pygocentrus_nattereri
ENSELUG00000000343	ovol1a	99	61.739	ENSPNAG00000020630	ovol1a	99	61.449	Pygocentrus_nattereri
ENSELUG00000000343	ovol1a	100	59.259	ENSSDUG00000009846	ovol1a	100	59.843	Seriola_dumerili
ENSELUG00000000343	ovol1a	68	53.219	ENSXCOG00000006461	-	78	53.219	Xiphophorus_couchianus