EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000000585 (Gene tree)
Gene ID: 105014004
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 38
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 20330 bases
Position: chrLG12:30677756-30698085
Accession: 105014004
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000036465	RRM_1	PF00076.22	2.3e-16	1	1
ENSELUP00000015866	RRM_1	PF00076.22	2.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000025058	-	3382	-	ENSELUP00000015866	239 (aa)	-	-
ENSELUT00000025068	-	3437	XM_010875939	ENSELUP00000036465	225 (aa)	XP_010874241	UPI000577C2D6

Gene Model

Click here to download ENSELUG00000000585's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000000585's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000000585	-	98	64.912	ENSELUG00000005849	-	90	64.912
ENSELUG00000000585	-	67	70.701	ENSELUG00000002970	-	94	56.962
ENSELUG00000000585	-	61	76.087	ENSELUG00000007163	rbm24a	84	62.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000000585	-	87	65.174	ENSG00000132819	RBM38	94	86.325	Homo_sapiens
ENSELUG00000000585	-	100	73.913	ENSAPOG00000003301	rbm38	92	73.913	Acanthochromis_polyacanthus
ENSELUG00000000585	-	98	64.444	ENSAPOG00000009939	-	90	70.707	Acanthochromis_polyacanthus
ENSELUG00000000585	-	100	72.609	ENSACIG00000000010	rbm38	91	72.609	Amphilophus_citrinellus
ENSELUG00000000585	-	98	64.000	ENSACIG00000012502	-	100	88.889	Amphilophus_citrinellus
ENSELUG00000000585	-	98	64.000	ENSAOCG00000012559	RBM38	92	68.142	Amphiprion_ocellaris
ENSELUG00000000585	-	100	73.913	ENSAOCG00000013497	-	92	73.913	Amphiprion_ocellaris
ENSELUG00000000585	-	100	73.913	ENSAPEG00000013137	rbm38	92	73.913	Amphiprion_percula
ENSELUG00000000585	-	98	63.556	ENSAPEG00000023581	-	90	67.699	Amphiprion_percula
ENSELUG00000000585	-	100	70.000	ENSATEG00000016366	rbm38	92	70.000	Anabas_testudineus
ENSELUG00000000585	-	80	73.118	ENSATEG00000016710	-	86	71.429	Anabas_testudineus
ENSELUG00000000585	-	87	62.500	ENSACAG00000016238	RBM38	82	62.500	Anolis_carolinensis
ENSELUG00000000585	-	87	65.672	ENSANAG00000031959	RBM38	81	88.889	Aotus_nancymaae
ENSELUG00000000585	-	98	63.319	ENSACLG00000019514	-	90	63.755	Astatotilapia_calliptera
ENSELUG00000000585	-	98	57.848	ENSAMXG00000038120	rbm38	91	57.848	Astyanax_mexicanus
ENSELUG00000000585	-	84	73.575	ENSAMXG00000015601	-	91	66.960	Astyanax_mexicanus
ENSELUG00000000585	-	84	66.154	ENSBTAG00000008105	RBM38	81	66.154	Bos_taurus
ENSELUG00000000585	-	51	68.421	WBGene00006321	sup-12	75	68.421	Caenorhabditis_elegans
ENSELUG00000000585	-	87	65.672	ENSCJAG00000019139	RBM38	81	88.889	Callithrix_jacchus
ENSELUG00000000585	-	87	64.677	ENSCAFG00020021943	RBM38	84	64.677	Canis_lupus_dingo
ENSELUG00000000585	-	84	65.464	ENSCHIG00000002609	RBM38	81	65.464	Capra_hircus
ENSELUG00000000585	-	87	65.174	ENSCPOG00000012781	RBM38	84	65.174	Cavia_porcellus
ENSELUG00000000585	-	87	65.672	ENSCCAG00000036872	RBM38	81	88.889	Cebus_capucinus
ENSELUG00000000585	-	84	66.495	ENSCATG00000032133	RBM38	81	88.889	Cercocebus_atys
ENSELUG00000000585	-	87	65.672	ENSCLAG00000005906	RBM38	87	65.672	Chinchilla_lanigera
ENSELUG00000000585	-	84	66.495	ENSCSAG00000015503	RBM38	81	66.495	Chlorocebus_sabaeus
ENSELUG00000000585	-	88	62.745	ENSCPBG00000024059	RBM38	93	62.745	Chrysemys_picta_bellii
ENSELUG00000000585	-	66	60.390	ENSCSAVG00000001132	-	58	60.390	Ciona_savignyi
ENSELUG00000000585	-	84	50.265	ENSCANG00000030105	-	70	50.265	Colobus_angolensis_palliatus
ENSELUG00000000585	-	78	67.778	ENSCGRG00001012928	Rbm38	84	65.174	Cricetulus_griseus_chok1gshd
ENSELUG00000000585	-	98	64.000	ENSCSEG00000004701	-	88	67.281	Cynoglossus_semilaevis
ENSELUG00000000585	-	83	65.445	ENSCSEG00000020943	rbm38	63	65.445	Cynoglossus_semilaevis
ENSELUG00000000585	-	80	72.043	ENSCVAG00000005472	-	90	64.444	Cyprinodon_variegatus
ENSELUG00000000585	-	100	68.261	ENSCVAG00000015952	rbm38	92	69.130	Cyprinodon_variegatus
ENSELUG00000000585	-	99	67.401	ENSDARG00000058818	rbm38	92	67.401	Danio_rerio
ENSELUG00000000585	-	80	67.391	ENSDNOG00000032004	RBM38	87	67.391	Dasypus_novemcinctus
ENSELUG00000000585	-	87	63.184	ENSECAG00000007700	RBM38	84	63.184	Equus_caballus
ENSELUG00000000585	-	87	63.184	ENSEEUG00000013489	RBM38	84	64.179	Erinaceus_europaeus
ENSELUG00000000585	-	80	68.478	ENSFCAG00000042916	RBM38	81	87.879	Felis_catus
ENSELUG00000000585	-	75	71.098	ENSFALG00000010805	RBM38	90	71.098	Ficedula_albicollis
ENSELUG00000000585	-	100	68.831	ENSFHEG00000017748	rbm38	92	68.831	Fundulus_heteroclitus
ENSELUG00000000585	-	86	69.192	ENSFHEG00000006160	-	86	69.192	Fundulus_heteroclitus
ENSELUG00000000585	-	81	73.016	ENSGMOG00000016655	-	100	74.074	Gadus_morhua
ENSELUG00000000585	-	84	65.285	ENSGALG00000026081	RBM38	92	64.532	Gallus_gallus
ENSELUG00000000585	-	100	66.960	ENSGACG00000015224	rbm38	98	66.960	Gasterosteus_aculeatus
ENSELUG00000000585	-	98	61.778	ENSGACG00000009873	-	95	62.222	Gasterosteus_aculeatus
ENSELUG00000000585	-	88	62.745	ENSGAGG00000001187	RBM38	93	62.745	Gopherus_agassizii
ENSELUG00000000585	-	100	72.609	ENSHBUG00000012058	rbm38	92	72.609	Haplochromis_burtoni
ENSELUG00000000585	-	98	63.319	ENSHBUG00000011778	-	85	70.098	Haplochromis_burtoni
ENSELUG00000000585	-	66	77.703	ENSHGLG00000015077	RBM38	84	65.174	Heterocephalus_glaber_female
ENSELUG00000000585	-	87	69.000	ENSHCOG00000005622	-	56	70.500	Hippocampus_comes
ENSELUG00000000585	-	97	59.276	ENSHCOG00000019040	rbm38	87	59.276	Hippocampus_comes
ENSELUG00000000585	-	80	73.770	ENSIPUG00000019349	-	76	73.770	Ictalurus_punctatus
ENSELUG00000000585	-	97	61.404	ENSKMAG00000012402	rbm38	97	61.842	Kryptolebias_marmoratus
ENSELUG00000000585	-	98	62.882	ENSLBEG00000016163	RBM38	85	71.574	Labrus_bergylta
ENSELUG00000000585	-	100	70.435	ENSLBEG00000018878	rbm38	92	70.435	Labrus_bergylta
ENSELUG00000000585	-	99	66.372	ENSLOCG00000003456	rbm38	91	66.372	Lepisosteus_oculatus
ENSELUG00000000585	-	84	66.495	ENSMFAG00000043808	RBM38	81	88.889	Macaca_fascicularis
ENSELUG00000000585	-	84	66.495	ENSMMUG00000031391	RBM38	81	88.889	Macaca_mulatta
ENSELUG00000000585	-	84	66.495	ENSMNEG00000034683	RBM38	81	88.889	Macaca_nemestrina
ENSELUG00000000585	-	100	72.489	ENSMAMG00000024135	rbm38	92	72.489	Mastacembelus_armatus
ENSELUG00000000585	-	98	64.889	ENSMAMG00000020499	RBM38	90	68.142	Mastacembelus_armatus
ENSELUG00000000585	-	98	63.319	ENSMZEG00005000849	-	85	70.098	Maylandia_zebra
ENSELUG00000000585	-	100	72.609	ENSMZEG00005026036	rbm38	92	72.609	Maylandia_zebra
ENSELUG00000000585	-	78	67.778	ENSMAUG00000021211	Rbm38	84	65.174	Mesocricetus_auratus
ENSELUG00000000585	-	87	65.174	ENSMICG00000038011	RBM38	93	65.174	Microcebus_murinus
ENSELUG00000000585	-	78	67.778	ENSMOCG00000008715	Rbm38	84	65.174	Microtus_ochrogaster
ENSELUG00000000585	-	98	64.000	ENSMMOG00000020051	-	84	73.016	Mola_mola
ENSELUG00000000585	-	83	65.104	ENSMODG00000016458	RBM38	86	62.439	Monodelphis_domestica
ENSELUG00000000585	-	68	78.205	ENSMALG00000022327	rbm38	91	60.088	Monopterus_albus
ENSELUG00000000585	-	80	74.054	ENSMALG00000004680	RBM38	69	74.054	Monopterus_albus
ENSELUG00000000585	-	87	64.677	MGP_CAROLIEiJ_G0024745	Rbm38	63	88.000	Mus_caroli
ENSELUG00000000585	-	87	64.677	ENSMUSG00000027510	Rbm38	63	88.000	Mus_musculus
ENSELUG00000000585	-	87	64.677	MGP_PahariEiJ_G0026186	Rbm38	63	88.000	Mus_pahari
ENSELUG00000000585	-	87	64.677	MGP_SPRETEiJ_G0025665	Rbm38	63	88.000	Mus_spretus
ENSELUG00000000585	-	80	67.568	ENSMPUG00000006518	RBM38	99	63.107	Mustela_putorius_furo
ENSELUG00000000585	-	87	64.179	ENSMLUG00000011140	RBM38	93	64.179	Myotis_lucifugus
ENSELUG00000000585	-	100	73.478	ENSNBRG00000022685	rbm38	92	73.478	Neolamprologus_brichardi
ENSELUG00000000585	-	98	63.755	ENSNBRG00000022545	-	90	64.192	Neolamprologus_brichardi
ENSELUG00000000585	-	52	78.448	ENSMEUG00000005475	-	86	78.448	Notamacropus_eugenii
ENSELUG00000000585	-	87	65.672	ENSODEG00000007980	RBM38	84	65.672	Octodon_degus
ENSELUG00000000585	-	100	73.043	ENSONIG00000017073	rbm38	93	73.043	Oreochromis_niloticus
ENSELUG00000000585	-	98	63.755	ENSONIG00000020324	-	90	64.192	Oreochromis_niloticus
ENSELUG00000000585	-	83	61.979	ENSOANG00000009259	RBM38	74	61.979	Ornithorhynchus_anatinus
ENSELUG00000000585	-	80	72.432	ENSORLG00000027180	-	90	66.520	Oryzias_latipes
ENSELUG00000000585	-	99	64.192	ENSORLG00000012154	rbm38	91	64.192	Oryzias_latipes
ENSELUG00000000585	-	80	72.432	ENSORLG00020020751	-	90	66.520	Oryzias_latipes_hni
ENSELUG00000000585	-	99	64.192	ENSORLG00020017871	rbm38	91	64.192	Oryzias_latipes_hni
ENSELUG00000000585	-	98	61.538	ENSORLG00015017040	-	90	66.520	Oryzias_latipes_hsok
ENSELUG00000000585	-	99	64.192	ENSORLG00015012606	rbm38	91	64.192	Oryzias_latipes_hsok
ENSELUG00000000585	-	99	63.755	ENSOMEG00000006805	rbm38	91	63.755	Oryzias_melastigma
ENSELUG00000000585	-	98	63.111	ENSOMEG00000023912	-	90	66.372	Oryzias_melastigma
ENSELUG00000000585	-	87	65.672	ENSOGAG00000029136	RBM38	83	65.672	Otolemur_garnettii
ENSELUG00000000585	-	80	68.478	ENSPPRG00000009507	RBM38	81	87.879	Panthera_pardus
ENSELUG00000000585	-	82	66.138	ENSPTRG00000013661	RBM38	81	88.889	Pan_troglodytes
ENSELUG00000000585	-	56	84.000	ENSPTRG00000045845	-	68	84.000	Pan_troglodytes
ENSELUG00000000585	-	84	52.062	ENSPANG00000033127	-	84	50.761	Papio_anubis
ENSELUG00000000585	-	84	66.495	ENSPANG00000020919	-	81	88.889	Papio_anubis
ENSELUG00000000585	-	98	65.044	ENSPKIG00000018122	-	100	84.615	Paramormyrops_kingsleyae
ENSELUG00000000585	-	89	65.315	ENSPKIG00000025417	rbm38	89	66.055	Paramormyrops_kingsleyae
ENSELUG00000000585	-	89	61.463	ENSPSIG00000011649	RBM38	86	61.463	Pelodiscus_sinensis
ENSELUG00000000585	-	100	65.652	ENSPMGG00000011343	rbm38	92	68.696	Periophthalmus_magnuspinnatus
ENSELUG00000000585	-	80	66.489	ENSPMGG00000017094	-	91	60.699	Periophthalmus_magnuspinnatus
ENSELUG00000000585	-	87	64.000	ENSPCIG00000013648	RBM38	84	64.000	Phascolarctos_cinereus
ENSELUG00000000585	-	100	65.812	ENSPFOG00000011658	rbm38	92	67.949	Poecilia_formosa
ENSELUG00000000585	-	88	66.355	ENSPLAG00000002500	-	86	66.355	Poecilia_latipinna
ENSELUG00000000585	-	100	65.812	ENSPLAG00000005218	rbm38	92	67.949	Poecilia_latipinna
ENSELUG00000000585	-	100	65.385	ENSPMEG00000015770	rbm38	92	67.949	Poecilia_mexicana
ENSELUG00000000585	-	100	66.239	ENSPREG00000007398	rbm38	92	68.376	Poecilia_reticulata
ENSELUG00000000585	-	87	65.174	ENSPCOG00000026201	RBM38	80	88.889	Propithecus_coquereli
ENSELUG00000000585	-	78	41.667	ENSPVAG00000006457	RBM38	80	40.704	Pteropus_vampyrus
ENSELUG00000000585	-	98	63.319	ENSPNYG00000019727	-	100	88.889	Pundamilia_nyererei
ENSELUG00000000585	-	100	72.174	ENSPNYG00000021373	rbm38	92	72.174	Pundamilia_nyererei
ENSELUG00000000585	-	99	64.758	ENSPNAG00000015123	-	91	86.441	Pygocentrus_nattereri
ENSELUG00000000585	-	98	63.964	ENSPNAG00000010596	rbm38	90	63.964	Pygocentrus_nattereri
ENSELUG00000000585	-	87	65.174	ENSRNOG00000006420	Rbm38	84	65.174	Rattus_norvegicus
ENSELUG00000000585	-	86	56.410	ENSRROG00000036388	-	81	56.410	Rhinopithecus_roxellana
ENSELUG00000000585	-	87	65.672	ENSSBOG00000031053	RBM38	92	88.889	Saimiri_boliviensis_boliviensis
ENSELUG00000000585	-	99	59.322	ENSSFOG00015004453	rbm38	91	61.441	Scleropages_formosus
ENSELUG00000000585	-	98	65.333	ENSSDUG00000021082	RBM38	90	68.142	Seriola_dumerili
ENSELUG00000000585	-	100	71.739	ENSSDUG00000022611	rbm38	92	71.739	Seriola_dumerili
ENSELUG00000000585	-	98	65.333	ENSSLDG00000011778	RBM38	90	68.142	Seriola_lalandi_dorsalis
ENSELUG00000000585	-	100	71.739	ENSSLDG00000010845	rbm38	92	71.739	Seriola_lalandi_dorsalis
ENSELUG00000000585	-	98	64.889	ENSSPAG00000020989	RBM38	90	72.500	Stegastes_partitus
ENSELUG00000000585	-	100	73.478	ENSSPAG00000011113	rbm38	92	73.478	Stegastes_partitus
ENSELUG00000000585	-	87	65.672	ENSSSCG00000007504	RBM38	84	65.672	Sus_scrofa
ENSELUG00000000585	-	99	68.261	ENSTRUG00000024954	rbm38	91	69.130	Takifugu_rubripes
ENSELUG00000000585	-	98	65.333	ENSTRUG00000019869	-	90	65.778	Takifugu_rubripes
ENSELUG00000000585	-	98	64.889	ENSTNIG00000007093	-	93	68.269	Tetraodon_nigroviridis
ENSELUG00000000585	-	80	68.478	ENSUAMG00000019780	RBM38	84	65.174	Ursus_americanus
ENSELUG00000000585	-	87	64.677	ENSVVUG00000017246	RBM38	84	64.677	Vulpes_vulpes
ENSELUG00000000585	-	84	64.767	ENSXETG00000011268	rbm38	94	58.667	Xenopus_tropicalis
ENSELUG00000000585	-	52	84.553	ENSXCOG00000017324	-	56	84.553	Xiphophorus_couchianus
ENSELUG00000000585	-	100	68.261	ENSXMAG00000023662	rbm38	92	69.130	Xiphophorus_maculatus