EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000000608 (Gene tree)
Gene ID: 105025806
Gene Symbol: -
Alias: -
Full Name: 60S ribosomal protein L36a-like
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 8013 bases
Position: chrAZJR03000945.1:546344-554356
Accession: 105025806
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000016283	Ribosomal_L44	PF00935.19	1.2e-37	1	1
ENSELUP00000016291	Ribosomal_L44	PF00935.19	2.2e-37	1	1
ENSELUP00000016297	Ribosomal_L44	PF00935.19	2.9e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000025585	-	4302	-	ENSELUP00000016291	117 (aa)	-	-
ENSELUT00000025599	-	4355	-	ENSELUP00000016297	128 (aa)	-	UPI0005771350
ENSELUT00000025575	-	297	-	ENSELUP00000016283	98 (aa)	-	-

Gene Model

Click here to download ENSELUG00000000608's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000000608's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000000608	-	99	96.907	ENSELUG00000011650	-	74	97.170

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000000608	-	99	91.753	ENSAPOG00000013433	-	100	92.453	Acanthochromis_polyacanthus
ENSELUG00000000608	-	99	75.510	WBGene00004454	rpl-36.A	100	76.636	Caenorhabditis_elegans
ENSELUG00000000608	-	51	94.000	ENSCHOG00000010261	-	100	94.915	Choloepus_hoffmanni
ENSELUG00000000608	-	99	75.758	ENSCING00000014452	-	100	76.852	Ciona_intestinalis
ENSELUG00000000608	-	99	78.788	ENSCSAVG00000007282	-	100	79.630	Ciona_savignyi
ENSELUG00000000608	-	99	95.876	ENSCSEG00000002856	-	100	96.226	Cynoglossus_semilaevis
ENSELUG00000000608	-	99	75.258	FBgn0031980	RpL36A	100	76.415	Drosophila_melanogaster
ENSELUG00000000608	-	99	92.784	ENSEBUG00000008606	-	56	93.333	Eptatretus_burgeri
ENSELUG00000000608	-	99	72.165	ENSMODG00000025578	-	79	68.868	Monodelphis_domestica
ENSELUG00000000608	-	94	92.391	ENSMALG00000005415	-	94	93.407	Monopterus_albus
ENSELUG00000000608	-	51	94.000	ENSOPRG00000007961	-	100	94.915	Ochotona_princeps
ENSELUG00000000608	-	54	92.453	ENSPKIG00000021146	-	79	94.915	Paramormyrops_kingsleyae
ENSELUG00000000608	-	51	94.000	ENSPCAG00000003271	-	100	94.915	Procavia_capensis
ENSELUG00000000608	-	99	70.707	YNL162W	RPL42A	100	72.222	Saccharomyces_cerevisiae
ENSELUG00000000608	-	99	70.707	YHR141C	RPL42B	100	72.222	Saccharomyces_cerevisiae
ENSELUG00000000608	-	99	69.072	ENSSHAG00000013479	-	72	61.789	Sarcophilus_harrisii
ENSELUG00000000608	-	95	68.421	ENSSLDG00000003666	-	97	69.231	Seriola_lalandi_dorsalis
ENSELUG00000000608	-	97	91.579	ENSTRUG00000012092	-	77	86.957	Takifugu_rubripes