EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000000733 (Gene tree)
Gene ID: 105017026
Gene Symbol: rad18
Alias: zgc:55577
Full Name: RAD18%2C E3 ubiquitin protein ligase
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 53696 bases
Position: chrLG17:16711779-16765474
Accession: 105017026
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000018626	SAP	PF02037.27	6.8e-07	1	1
ENSELUP00000038272	SAP	PF02037.27	7e-07	1	1
ENSELUP00000018635	SAP	PF02037.27	7.1e-07	1	1
ENSELUP00000018648	SAP	PF02037.27	7.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000028594	-	3059	XM_010881318	ENSELUP00000018648	514 (aa)	XP_010879620	UPI00057664C7
ENSELUT00000040657	-	3334	XM_010881320	ENSELUP00000018635	498 (aa)	XP_010879622	UPI000575EC51
ENSELUT00000028608	-	3041	XM_020055195	ENSELUP00000018626	486 (aa)	XP_019910754	UPI00097348BF
ENSELUT00000028582	-	3023	XM_010881319	ENSELUP00000038272	502 (aa)	XP_010879621	UPI000576AFCC

Gene Model

Click here to download ENSELUG00000000733's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000000733's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000000733	rad18	77	43.421	ENSG00000070950	RAD18	89	58.025	Homo_sapiens
ENSELUG00000000733	rad18	100	54.528	ENSAPOG00000005260	rad18	97	54.457	Acanthochromis_polyacanthus
ENSELUG00000000733	rad18	73	44.628	ENSAMEG00000012375	RAD18	59	44.628	Ailuropoda_melanoleuca
ENSELUG00000000733	rad18	75	56.614	ENSACIG00000020655	rad18	86	56.614	Amphilophus_citrinellus
ENSELUG00000000733	rad18	100	54.651	ENSAOCG00000004507	rad18	100	54.651	Amphiprion_ocellaris
ENSELUG00000000733	rad18	82	60.827	ENSAPEG00000016837	rad18	100	54.237	Amphiprion_percula
ENSELUG00000000733	rad18	75	42.513	ENSAPLG00000003138	RAD18	73	42.513	Anas_platyrhynchos
ENSELUG00000000733	rad18	82	41.422	ENSANAG00000033360	RAD18	76	41.500	Aotus_nancymaae
ENSELUG00000000733	rad18	100	52.107	ENSACLG00000023506	rad18	100	52.490	Astatotilapia_calliptera
ENSELUG00000000733	rad18	97	49.595	ENSAMXG00000002534	rad18	99	51.434	Astyanax_mexicanus
ENSELUG00000000733	rad18	82	42.260	ENSBTAG00000012142	RAD18	97	37.120	Bos_taurus
ENSELUG00000000733	rad18	79	43.112	ENSCJAG00000040303	RAD18	76	43.112	Callithrix_jacchus
ENSELUG00000000733	rad18	81	43.142	ENSCAFG00000005548	RAD18	73	43.142	Canis_familiaris
ENSELUG00000000733	rad18	81	43.142	ENSCAFG00020009228	RAD18	73	43.142	Canis_lupus_dingo
ENSELUG00000000733	rad18	83	42.092	ENSCHIG00000007965	RAD18	94	43.750	Capra_hircus
ENSELUG00000000733	rad18	77	42.298	ENSTSYG00000012189	RAD18	71	43.342	Carlito_syrichta
ENSELUG00000000733	rad18	77	39.119	ENSCAPG00000000356	RAD18	77	40.000	Cavia_aperea
ENSELUG00000000733	rad18	81	40.482	ENSCPOG00000013890	RAD18	73	41.266	Cavia_porcellus
ENSELUG00000000733	rad18	82	41.667	ENSCCAG00000022920	RAD18	76	42.402	Cebus_capucinus
ENSELUG00000000733	rad18	77	43.684	ENSCATG00000039277	RAD18	72	43.684	Cercocebus_atys
ENSELUG00000000733	rad18	81	40.587	ENSCLAG00000003652	RAD18	72	41.688	Chinchilla_lanigera
ENSELUG00000000733	rad18	77	43.947	ENSCSAG00000010783	RAD18	69	43.947	Chlorocebus_sabaeus
ENSELUG00000000733	rad18	84	42.757	ENSCPBG00000014787	RAD18	78	44.643	Chrysemys_picta_bellii
ENSELUG00000000733	rad18	93	40.175	ENSCANG00000007308	RAD18	88	39.530	Colobus_angolensis_palliatus
ENSELUG00000000733	rad18	81	40.648	ENSCGRG00001018154	-	77	41.379	Cricetulus_griseus_chok1gshd
ENSELUG00000000733	rad18	80	39.394	ENSCGRG00001010209	-	73	39.394	Cricetulus_griseus_chok1gshd
ENSELUG00000000733	rad18	80	39.646	ENSCGRG00000019636	-	73	39.646	Cricetulus_griseus_crigri
ENSELUG00000000733	rad18	81	40.648	ENSCGRG00000007283	-	77	41.379	Cricetulus_griseus_crigri
ENSELUG00000000733	rad18	88	55.402	ENSCSEG00000002516	rad18	95	51.697	Cynoglossus_semilaevis
ENSELUG00000000733	rad18	84	54.237	ENSDARG00000027938	rad18	98	50.630	Danio_rerio
ENSELUG00000000733	rad18	80	41.667	ENSDNOG00000040055	RAD18	71	42.677	Dasypus_novemcinctus
ENSELUG00000000733	rad18	82	42.998	ENSDORG00000001099	Rad18	78	42.998	Dipodomys_ordii
ENSELUG00000000733	rad18	69	41.813	ENSETEG00000002268	RAD18	68	41.813	Echinops_telfairi
ENSELUG00000000733	rad18	81	44.472	ENSEASG00005013316	RAD18	68	44.472	Equus_asinus_asinus
ENSELUG00000000733	rad18	81	44.472	ENSECAG00000010746	RAD18	71	44.472	Equus_caballus
ENSELUG00000000733	rad18	83	43.237	ENSFCAG00000025747	RAD18	76	43.237	Felis_catus
ENSELUG00000000733	rad18	84	40.723	ENSFALG00000013625	RAD18	87	40.723	Ficedula_albicollis
ENSELUG00000000733	rad18	83	41.304	ENSFDAG00000009907	RAD18	76	41.304	Fukomys_damarensis
ENSELUG00000000733	rad18	81	39.706	ENSGALG00000008368	RAD18	78	40.587	Gallus_gallus
ENSELUG00000000733	rad18	82	56.724	ENSGACG00000000920	rad18	97	53.165	Gasterosteus_aculeatus
ENSELUG00000000733	rad18	74	44.414	ENSGAGG00000005184	RAD18	73	44.414	Gopherus_agassizii
ENSELUG00000000733	rad18	77	43.684	ENSGGOG00000008391	RAD18	70	43.947	Gorilla_gorilla
ENSELUG00000000733	rad18	91	49.896	ENSHBUG00000013322	rad18	99	50.313	Haplochromis_burtoni
ENSELUG00000000733	rad18	66	41.667	ENSHGLG00000009196	-	94	41.667	Heterocephalus_glaber_female
ENSELUG00000000733	rad18	66	41.667	ENSHGLG00100017675	-	94	41.667	Heterocephalus_glaber_male
ENSELUG00000000733	rad18	84	53.606	ENSIPUG00000018681	rad18	88	52.214	Ictalurus_punctatus
ENSELUG00000000733	rad18	65	43.293	ENSSTOG00000004870	-	94	43.293	Ictidomys_tridecemlineatus
ENSELUG00000000733	rad18	77	42.932	ENSJJAG00000001484	Rad18	97	38.669	Jaculus_jaculus
ENSELUG00000000733	rad18	100	53.321	ENSKMAG00000020725	rad18	99	53.321	Kryptolebias_marmoratus
ENSELUG00000000733	rad18	66	42.771	ENSLACG00000018437	RAD18	99	42.771	Latimeria_chalumnae
ENSELUG00000000733	rad18	84	53.253	ENSLOCG00000010629	rad18	98	48.945	Lepisosteus_oculatus
ENSELUG00000000733	rad18	78	42.894	ENSLAFG00000004667	RAD18	73	42.894	Loxodonta_africana
ENSELUG00000000733	rad18	77	43.947	ENSMFAG00000028864	RAD18	70	43.947	Macaca_fascicularis
ENSELUG00000000733	rad18	77	43.947	ENSMMUG00000020013	RAD18	97	43.373	Macaca_mulatta
ENSELUG00000000733	rad18	77	43.947	ENSMNEG00000013464	RAD18	70	43.947	Macaca_nemestrina
ENSELUG00000000733	rad18	77	43.684	ENSMLEG00000014306	RAD18	70	43.684	Mandrillus_leucophaeus
ENSELUG00000000733	rad18	93	52.191	ENSMAMG00000023936	rad18	100	52.191	Mastacembelus_armatus
ENSELUG00000000733	rad18	100	51.533	ENSMZEG00005010577	rad18	93	51.916	Maylandia_zebra
ENSELUG00000000733	rad18	87	38.636	ENSMGAG00000010131	RAD18	86	38.636	Meleagris_gallopavo
ENSELUG00000000733	rad18	76	41.645	ENSMAUG00000020642	Rad18	77	41.645	Mesocricetus_auratus
ENSELUG00000000733	rad18	80	42.607	ENSMICG00000013536	RAD18	74	42.607	Microcebus_murinus
ENSELUG00000000733	rad18	79	41.837	ENSMOCG00000009114	Rad18	76	41.842	Microtus_ochrogaster
ENSELUG00000000733	rad18	74	60.215	ENSMMOG00000021793	rad18	96	60.215	Mola_mola
ENSELUG00000000733	rad18	85	40.089	ENSMODG00000004679	RAD18	77	41.055	Monodelphis_domestica
ENSELUG00000000733	rad18	82	41.235	MGP_CAROLIEiJ_G0028712	Rad18	95	43.519	Mus_caroli
ENSELUG00000000733	rad18	95	36.273	ENSMUSG00000030254	Rad18	95	42.462	Mus_musculus
ENSELUG00000000733	rad18	97	37.728	MGP_PahariEiJ_G0022463	Rad18	95	43.519	Mus_pahari
ENSELUG00000000733	rad18	86	39.858	MGP_SPRETEiJ_G0029740	Rad18	95	42.769	Mus_spretus
ENSELUG00000000733	rad18	86	42.523	ENSMPUG00000017063	RAD18	79	42.523	Mustela_putorius_furo
ENSELUG00000000733	rad18	79	42.199	ENSMLUG00000016494	RAD18	71	44.103	Myotis_lucifugus
ENSELUG00000000733	rad18	76	42.175	ENSNGAG00000012464	Rad18	80	42.175	Nannospalax_galili
ENSELUG00000000733	rad18	76	54.856	ENSNBRG00000004794	rad18	97	54.856	Neolamprologus_brichardi
ENSELUG00000000733	rad18	77	43.684	ENSNLEG00000003789	RAD18	70	43.947	Nomascus_leucogenys
ENSELUG00000000733	rad18	57	41.343	ENSMEUG00000003444	-	61	41.696	Notamacropus_eugenii
ENSELUG00000000733	rad18	81	42.000	ENSOPRG00000013856	RAD18	75	42.000	Ochotona_princeps
ENSELUG00000000733	rad18	64	43.574	ENSODEG00000018158	RAD18	93	43.574	Octodon_degus
ENSELUG00000000733	rad18	96	53.862	ENSONIG00000018979	rad18	97	54.624	Oreochromis_niloticus
ENSELUG00000000733	rad18	82	41.379	ENSOCUG00000000013	RAD18	74	41.379	Oryctolagus_cuniculus
ENSELUG00000000733	rad18	76	54.667	ENSORLG00000029026	rad18	96	54.667	Oryzias_latipes
ENSELUG00000000733	rad18	81	40.898	ENSOGAG00000001410	RAD18	75	41.147	Otolemur_garnettii
ENSELUG00000000733	rad18	82	41.463	ENSOARG00000007445	RAD18	75	41.463	Ovis_aries
ENSELUG00000000733	rad18	77	43.684	ENSPPAG00000035797	RAD18	70	43.947	Pan_paniscus
ENSELUG00000000733	rad18	83	44.096	ENSPPRG00000004021	RAD18	76	44.096	Panthera_pardus
ENSELUG00000000733	rad18	83	44.096	ENSPTIG00000008602	RAD18	71	45.195	Panthera_tigris_altaica
ENSELUG00000000733	rad18	77	43.455	ENSPTRG00000014583	RAD18	70	43.455	Pan_troglodytes
ENSELUG00000000733	rad18	77	43.947	ENSPANG00000008855	RAD18	70	43.947	Papio_anubis
ENSELUG00000000733	rad18	81	42.469	ENSPSIG00000006928	RAD18	75	42.469	Pelodiscus_sinensis
ENSELUG00000000733	rad18	71	55.367	ENSPMGG00000013294	rad18	94	55.367	Periophthalmus_magnuspinnatus
ENSELUG00000000733	rad18	79	40.617	ENSPEMG00000022129	Rad18	77	41.645	Peromyscus_maniculatus_bairdii
ENSELUG00000000733	rad18	85	40.590	ENSPCIG00000024872	RAD18	87	40.590	Phascolarctos_cinereus
ENSELUG00000000733	rad18	76	57.294	ENSPFOG00000002722	rad18	98	57.294	Poecilia_formosa
ENSELUG00000000733	rad18	77	43.421	ENSPPYG00000013688	RAD18	70	43.421	Pongo_abelii
ENSELUG00000000733	rad18	53	44.030	ENSPCAG00000008229	RAD18	59	44.030	Procavia_capensis
ENSELUG00000000733	rad18	82	42.574	ENSPVAG00000012220	RAD18	76	43.210	Pteropus_vampyrus
ENSELUG00000000733	rad18	100	52.299	ENSPNYG00000006815	rad18	100	52.682	Pundamilia_nyererei
ENSELUG00000000733	rad18	97	50.518	ENSPNAG00000016082	rad18	100	50.610	Pygocentrus_nattereri
ENSELUG00000000733	rad18	79	42.564	ENSRNOG00000005907	Rad18	72	42.821	Rattus_norvegicus
ENSELUG00000000733	rad18	77	41.995	ENSRBIG00000044173	RAD18	72	41.176	Rhinopithecus_bieti
ENSELUG00000000733	rad18	77	43.421	ENSRROG00000043948	RAD18	73	42.564	Rhinopithecus_roxellana
ENSELUG00000000733	rad18	79	43.478	ENSSBOG00000008434	-	73	43.478	Saimiri_boliviensis_boliviensis
ENSELUG00000000733	rad18	79	40.796	ENSSHAG00000012472	-	91	40.796	Sarcophilus_harrisii
ENSELUG00000000733	rad18	99	50.696	ENSSFOG00015019264	rad18	99	50.772	Scleropages_formosus
ENSELUG00000000733	rad18	64	46.082	ENSSPUG00000017486	RAD18	94	46.082	Sphenodon_punctatus
ENSELUG00000000733	rad18	99	54.688	ENSSPAG00000007165	rad18	99	54.688	Stegastes_partitus
ENSELUG00000000733	rad18	77	43.684	ENSSSCG00000026158	RAD18	74	42.643	Sus_scrofa
ENSELUG00000000733	rad18	78	39.267	ENSTGUG00000010405	RAD18	80	39.267	Taeniopygia_guttata
ENSELUG00000000733	rad18	74	57.027	ENSTRUG00000003517	rad18	98	57.027	Takifugu_rubripes
ENSELUG00000000733	rad18	77	57.368	ENSTNIG00000014625	rad18	98	57.368	Tetraodon_nigroviridis
ENSELUG00000000733	rad18	79	42.569	ENSTTRG00000005034	RAD18	74	42.317	Tursiops_truncatus
ENSELUG00000000733	rad18	83	41.809	ENSUMAG00000019279	RAD18	73	43.500	Ursus_maritimus
ENSELUG00000000733	rad18	78	40.617	ENSVPAG00000002063	RAD18	79	40.302	Vicugna_pacos
ENSELUG00000000733	rad18	81	42.643	ENSVVUG00000025318	RAD18	76	42.643	Vulpes_vulpes
ENSELUG00000000733	rad18	77	42.670	ENSXETG00000033878	RAD18	95	42.670	Xenopus_tropicalis
ENSELUG00000000733	rad18	76	51.596	ENSXCOG00000020018	rad18	95	51.596	Xiphophorus_couchianus
ENSELUG00000000733	rad18	76	51.862	ENSXMAG00000001516	rad18	95	51.862	Xiphophorus_maculatus