EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000000953 (Gene tree)
Gene ID: 105025878
Gene Symbol: cnot3b
Alias: cnot3|wu:fi20g07|zgc:55934
Full Name: CCR4-NOT transcription complex subunit 3
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 16609 bases
Position: chrLG10:5714059-5730667
Accession: 105025878
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000023384	Not3	PF04065.15	1.1e-94	1	1
ENSELUP00000023384	NOT2_3_5	PF04153.18	1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000034552	-	4642	XM_010896898	ENSELUP00000023384	933 (aa)	XP_010895200	UPI0005763EB1

Gene Model

Click here to download ENSELUG00000000953's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000000953's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000000953	cnot3b	54	64.990	ENSELUG00000014743	cnot3a	100	66.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000000953	cnot3b	66	88.525	ENSG00000088038	CNOT3	100	94.330	Homo_sapiens
ENSELUG00000000953	cnot3b	53	91.818	ENSAPOG00000015002	cnot3b	91	91.818	Acanthochromis_polyacanthus
ENSELUG00000000953	cnot3b	56	81.004	ENSAPOG00000015499	CNOT3	92	81.004	Acanthochromis_polyacanthus
ENSELUG00000000953	cnot3b	70	88.852	ENSAMEG00000004528	CNOT3	95	89.216	Ailuropoda_melanoleuca
ENSELUG00000000953	cnot3b	66	93.304	ENSACIG00000003652	cnot3b	99	93.304	Amphilophus_citrinellus
ENSELUG00000000953	cnot3b	76	91.597	ENSACIG00000006635	cnot3a	98	92.735	Amphilophus_citrinellus
ENSELUG00000000953	cnot3b	97	65.976	ENSAOCG00000018385	-	98	79.904	Amphiprion_ocellaris
ENSELUG00000000953	cnot3b	97	69.399	ENSAPEG00000002640	cnot3b	100	89.224	Amphiprion_percula
ENSELUG00000000953	cnot3b	50	65.756	ENSAPEG00000006624	cnot3a	100	68.211	Amphiprion_percula
ENSELUG00000000953	cnot3b	57	62.868	ENSATEG00000022737	cnot3a	100	66.667	Anabas_testudineus
ENSELUG00000000953	cnot3b	100	74.167	ENSATEG00000015777	cnot3b	100	73.472	Anabas_testudineus
ENSELUG00000000953	cnot3b	71	88.312	ENSACAG00000016085	CNOT3	96	89.216	Anolis_carolinensis
ENSELUG00000000953	cnot3b	70	88.525	ENSANAG00000025756	CNOT3	85	88.889	Aotus_nancymaae
ENSELUG00000000953	cnot3b	100	71.519	ENSACLG00000016702	cnot3b	100	71.924	Astatotilapia_calliptera
ENSELUG00000000953	cnot3b	51	63.169	ENSAMXG00000012359	cnot3a	100	67.610	Astyanax_mexicanus
ENSELUG00000000953	cnot3b	100	72.046	ENSAMXG00000009447	cnot3b	98	92.473	Astyanax_mexicanus
ENSELUG00000000953	cnot3b	66	88.525	ENSBTAG00000014900	CNOT3	96	88.889	Bos_taurus
ENSELUG00000000953	cnot3b	66	88.525	ENSCJAG00000001094	CNOT3	85	88.889	Callithrix_jacchus
ENSELUG00000000953	cnot3b	71	88.525	ENSCAFG00000002699	CNOT3	91	88.889	Canis_familiaris
ENSELUG00000000953	cnot3b	71	88.525	ENSCAFG00020018359	CNOT3	91	88.889	Canis_lupus_dingo
ENSELUG00000000953	cnot3b	72	86.513	ENSCHIG00000015302	CNOT3	77	86.885	Capra_hircus
ENSELUG00000000953	cnot3b	66	88.525	ENSTSYG00000008058	CNOT3	85	88.889	Carlito_syrichta
ENSELUG00000000953	cnot3b	66	88.525	ENSCAPG00000009533	CNOT3	85	88.889	Cavia_aperea
ENSELUG00000000953	cnot3b	73	88.525	ENSCPOG00000020741	CNOT3	85	88.889	Cavia_porcellus
ENSELUG00000000953	cnot3b	66	88.525	ENSCCAG00000036290	CNOT3	85	88.889	Cebus_capucinus
ENSELUG00000000953	cnot3b	70	88.525	ENSCATG00000030324	CNOT3	85	88.889	Cercocebus_atys
ENSELUG00000000953	cnot3b	71	88.525	ENSCLAG00000003302	CNOT3	100	86.585	Chinchilla_lanigera
ENSELUG00000000953	cnot3b	70	88.525	ENSCSAG00000001900	CNOT3	85	88.889	Chlorocebus_sabaeus
ENSELUG00000000953	cnot3b	68	89.286	ENSCPBG00000011655	CNOT3	88	90.196	Chrysemys_picta_bellii
ENSELUG00000000953	cnot3b	86	48.052	ENSCING00000000293	-	75	66.932	Ciona_intestinalis
ENSELUG00000000953	cnot3b	66	88.525	ENSCANG00000013408	CNOT3	85	88.889	Colobus_angolensis_palliatus
ENSELUG00000000953	cnot3b	71	88.852	ENSCGRG00001000855	Cnot3	85	89.216	Cricetulus_griseus_chok1gshd
ENSELUG00000000953	cnot3b	100	65.514	ENSCSEG00000003574	cnot3a	100	66.909	Cynoglossus_semilaevis
ENSELUG00000000953	cnot3b	100	61.758	ENSCSEG00000016892	cnot3b	100	59.874	Cynoglossus_semilaevis
ENSELUG00000000953	cnot3b	100	64.873	ENSCVAG00000008168	cnot3a	100	65.720	Cyprinodon_variegatus
ENSELUG00000000953	cnot3b	100	70.127	ENSCVAG00000022122	cnot3b	100	70.402	Cyprinodon_variegatus
ENSELUG00000000953	cnot3b	100	65.762	ENSDARG00000007135	cnot3a	100	67.647	Danio_rerio
ENSELUG00000000953	cnot3b	100	70.085	ENSDARG00000019842	cnot3b	100	69.386	Danio_rerio
ENSELUG00000000953	cnot3b	70	88.197	ENSDNOG00000045972	CNOT3	85	88.562	Dasypus_novemcinctus
ENSELUG00000000953	cnot3b	70	88.525	ENSDORG00000008021	Cnot3	100	81.609	Dipodomys_ordii
ENSELUG00000000953	cnot3b	51	100.000	ENSETEG00000006305	CNOT3	63	100.000	Echinops_telfairi
ENSELUG00000000953	cnot3b	65	67.752	ENSEBUG00000010437	cnot3a	82	68.285	Eptatretus_burgeri
ENSELUG00000000953	cnot3b	66	88.525	ENSEASG00005021591	CNOT3	84	88.889	Equus_asinus_asinus
ENSELUG00000000953	cnot3b	66	88.525	ENSECAG00000023181	CNOT3	84	88.889	Equus_caballus
ENSELUG00000000953	cnot3b	77	78.711	ENSFCAG00000014042	CNOT3	85	88.889	Felis_catus
ENSELUG00000000953	cnot3b	100	72.046	ENSFHEG00000001696	cnot3b	100	71.097	Fundulus_heteroclitus
ENSELUG00000000953	cnot3b	100	65.561	ENSFHEG00000023166	cnot3a	98	84.644	Fundulus_heteroclitus
ENSELUG00000000953	cnot3b	94	62.235	ENSGMOG00000005365	cnot3a	98	63.070	Gadus_morhua
ENSELUG00000000953	cnot3b	55	62.476	ENSGAFG00000013094	cnot3a	100	68.017	Gambusia_affinis
ENSELUG00000000953	cnot3b	100	70.693	ENSGAFG00000003459	cnot3b	100	71.353	Gambusia_affinis
ENSELUG00000000953	cnot3b	76	61.792	ENSGACG00000009395	cnot3b	81	85.401	Gasterosteus_aculeatus
ENSELUG00000000953	cnot3b	64	88.716	ENSGAGG00000012677	CNOT3	87	87.671	Gopherus_agassizii
ENSELUG00000000953	cnot3b	66	88.525	ENSGGOG00000012996	CNOT3	85	88.889	Gorilla_gorilla
ENSELUG00000000953	cnot3b	99	64.255	ENSHBUG00000019699	cnot3b	99	65.429	Haplochromis_burtoni
ENSELUG00000000953	cnot3b	68	88.525	ENSHGLG00000008821	CNOT3	94	88.889	Heterocephalus_glaber_female
ENSELUG00000000953	cnot3b	61	82.824	ENSHGLG00100006181	CNOT3	100	81.609	Heterocephalus_glaber_male
ENSELUG00000000953	cnot3b	91	86.175	ENSHCOG00000020968	cnot3a	100	64.694	Hippocampus_comes
ENSELUG00000000953	cnot3b	89	77.828	ENSIPUG00000000167	cnot3	100	62.699	Ictalurus_punctatus
ENSELUG00000000953	cnot3b	100	67.306	ENSIPUG00000009046	cnot3b	100	67.131	Ictalurus_punctatus
ENSELUG00000000953	cnot3b	70	88.525	ENSSTOG00000028248	CNOT3	85	88.889	Ictidomys_tridecemlineatus
ENSELUG00000000953	cnot3b	70	88.852	ENSJJAG00000014594	Cnot3	95	89.216	Jaculus_jaculus
ENSELUG00000000953	cnot3b	100	66.172	ENSKMAG00000004863	cnot3a	100	81.159	Kryptolebias_marmoratus
ENSELUG00000000953	cnot3b	100	72.516	ENSKMAG00000018723	cnot3b	100	73.004	Kryptolebias_marmoratus
ENSELUG00000000953	cnot3b	97	71.351	ENSLBEG00000018278	cnot3b	99	72.088	Labrus_bergylta
ENSELUG00000000953	cnot3b	50	89.370	ENSLBEG00000017296	cnot3a	64	89.370	Labrus_bergylta
ENSELUG00000000953	cnot3b	66	89.180	ENSLACG00000009742	CNOT3	88	89.542	Latimeria_chalumnae
ENSELUG00000000953	cnot3b	59	93.407	ENSLOCG00000000005	cnot3b	89	91.579	Lepisosteus_oculatus
ENSELUG00000000953	cnot3b	66	88.235	ENSLAFG00000022133	CNOT3	85	88.599	Loxodonta_africana
ENSELUG00000000953	cnot3b	72	88.525	ENSMFAG00000040073	CNOT3	85	88.889	Macaca_fascicularis
ENSELUG00000000953	cnot3b	63	90.756	ENSMMUG00000009698	CNOT3	100	97.059	Macaca_mulatta
ENSELUG00000000953	cnot3b	70	88.525	ENSMNEG00000036750	CNOT3	85	88.889	Macaca_nemestrina
ENSELUG00000000953	cnot3b	70	88.525	ENSMLEG00000036579	CNOT3	90	88.889	Mandrillus_leucophaeus
ENSELUG00000000953	cnot3b	100	74.685	ENSMAMG00000019357	cnot3b	100	74.869	Mastacembelus_armatus
ENSELUG00000000953	cnot3b	100	71.958	ENSMZEG00005002466	cnot3b	100	72.679	Maylandia_zebra
ENSELUG00000000953	cnot3b	71	88.852	ENSMAUG00000014996	Cnot3	95	89.216	Mesocricetus_auratus
ENSELUG00000000953	cnot3b	66	88.525	ENSMICG00000002370	CNOT3	91	88.889	Microcebus_murinus
ENSELUG00000000953	cnot3b	78	88.034	ENSMMOG00000016446	cnot3a	100	66.068	Mola_mola
ENSELUG00000000953	cnot3b	66	91.026	ENSMMOG00000013086	cnot3b	98	91.026	Mola_mola
ENSELUG00000000953	cnot3b	58	89.180	ENSMODG00000004066	CNOT3	76	89.542	Monodelphis_domestica
ENSELUG00000000953	cnot3b	100	66.772	ENSMALG00000009204	cnot3a	100	67.152	Monopterus_albus
ENSELUG00000000953	cnot3b	69	90.909	ENSMALG00000004936	cnot3b	95	88.926	Monopterus_albus
ENSELUG00000000953	cnot3b	71	88.852	MGP_CAROLIEiJ_G0029095	Cnot3	100	97.000	Mus_caroli
ENSELUG00000000953	cnot3b	71	88.852	ENSMUSG00000035632	Cnot3	100	97.000	Mus_musculus
ENSELUG00000000953	cnot3b	71	88.852	MGP_PahariEiJ_G0020964	Cnot3	100	97.000	Mus_pahari
ENSELUG00000000953	cnot3b	71	88.852	MGP_SPRETEiJ_G0030148	Cnot3	100	97.000	Mus_spretus
ENSELUG00000000953	cnot3b	70	80.523	ENSMPUG00000010352	CNOT3	85	88.889	Mustela_putorius_furo
ENSELUG00000000953	cnot3b	70	88.525	ENSNGAG00000013266	Cnot3	85	88.889	Nannospalax_galili
ENSELUG00000000953	cnot3b	89	75.900	ENSNBRG00000003336	cnot3b	97	88.596	Neolamprologus_brichardi
ENSELUG00000000953	cnot3b	66	88.525	ENSNLEG00000006272	CNOT3	84	88.889	Nomascus_leucogenys
ENSELUG00000000953	cnot3b	71	88.525	ENSODEG00000000705	CNOT3	100	89.873	Octodon_degus
ENSELUG00000000953	cnot3b	100	72.269	ENSONIG00000007047	cnot3b	100	73.601	Oreochromis_niloticus
ENSELUG00000000953	cnot3b	56	62.712	ENSONIG00000006568	cnot3a	100	68.008	Oreochromis_niloticus
ENSELUG00000000953	cnot3b	70	88.525	ENSOCUG00000007691	CNOT3	85	88.889	Oryctolagus_cuniculus
ENSELUG00000000953	cnot3b	100	72.447	ENSORLG00020005779	cnot3b	100	73.277	Oryzias_latipes_hni
ENSELUG00000000953	cnot3b	100	72.930	ENSORLG00015019021	cnot3b	100	73.439	Oryzias_latipes_hsok
ENSELUG00000000953	cnot3b	65	79.508	ENSOMEG00000010309	cnot3a	100	66.143	Oryzias_melastigma
ENSELUG00000000953	cnot3b	100	71.670	ENSOMEG00000015557	cnot3b	100	71.414	Oryzias_melastigma
ENSELUG00000000953	cnot3b	71	79.213	ENSOGAG00000006945	CNOT3	85	88.889	Otolemur_garnettii
ENSELUG00000000953	cnot3b	66	88.525	ENSPPAG00000002748	CNOT3	85	88.889	Pan_paniscus
ENSELUG00000000953	cnot3b	77	78.711	ENSPPRG00000011705	CNOT3	85	88.889	Panthera_pardus
ENSELUG00000000953	cnot3b	60	88.629	ENSPTIG00000008781	CNOT3	96	89.298	Panthera_tigris_altaica
ENSELUG00000000953	cnot3b	66	88.525	ENSPTRG00000046717	-	85	88.889	Pan_troglodytes
ENSELUG00000000953	cnot3b	66	88.525	ENSPTRG00000011444	CNOT3	85	88.889	Pan_troglodytes
ENSELUG00000000953	cnot3b	70	88.525	ENSPANG00000009375	CNOT3	85	88.889	Papio_anubis
ENSELUG00000000953	cnot3b	100	64.470	ENSPKIG00000011733	CNOT3	100	58.246	Paramormyrops_kingsleyae
ENSELUG00000000953	cnot3b	66	95.726	ENSPKIG00000015967	-	100	90.837	Paramormyrops_kingsleyae
ENSELUG00000000953	cnot3b	98	63.243	ENSPMGG00000022539	cnot3b	99	60.902	Periophthalmus_magnuspinnatus
ENSELUG00000000953	cnot3b	79	78.142	ENSPEMG00000024185	Cnot3	85	89.216	Peromyscus_maniculatus_bairdii
ENSELUG00000000953	cnot3b	66	88.852	ENSPCIG00000023018	CNOT3	97	89.216	Phascolarctos_cinereus
ENSELUG00000000953	cnot3b	80	75.066	ENSPFOG00000008693	cnot3a	90	86.262	Poecilia_formosa
ENSELUG00000000953	cnot3b	100	73.284	ENSPFOG00000007168	cnot3b	100	71.609	Poecilia_formosa
ENSELUG00000000953	cnot3b	100	73.284	ENSPLAG00000013457	cnot3b	100	71.609	Poecilia_latipinna
ENSELUG00000000953	cnot3b	100	73.284	ENSPMEG00000010184	cnot3b	100	71.504	Poecilia_mexicana
ENSELUG00000000953	cnot3b	88	83.713	ENSPREG00000007592	cnot3a	100	90.040	Poecilia_reticulata
ENSELUG00000000953	cnot3b	99	67.631	ENSPREG00000000662	cnot3b	97	66.809	Poecilia_reticulata
ENSELUG00000000953	cnot3b	50	55.136	ENSPREG00000000766	-	99	54.400	Poecilia_reticulata
ENSELUG00000000953	cnot3b	66	88.197	ENSPPYG00000010372	CNOT3	85	88.562	Pongo_abelii
ENSELUG00000000953	cnot3b	51	93.220	ENSPCAG00000011999	CNOT3	56	93.220	Procavia_capensis
ENSELUG00000000953	cnot3b	70	88.525	ENSPCOG00000017673	CNOT3	95	88.889	Propithecus_coquereli
ENSELUG00000000953	cnot3b	74	79.651	ENSPVAG00000015564	CNOT3	85	87.908	Pteropus_vampyrus
ENSELUG00000000953	cnot3b	99	65.745	ENSPNYG00000003358	cnot3b	99	65.854	Pundamilia_nyererei
ENSELUG00000000953	cnot3b	100	73.774	ENSPNAG00000027459	cnot3b	100	73.397	Pygocentrus_nattereri
ENSELUG00000000953	cnot3b	53	84.793	ENSPNAG00000017679	cnot3a	100	66.494	Pygocentrus_nattereri
ENSELUG00000000953	cnot3b	71	88.852	ENSRNOG00000053234	Cnot3	85	89.216	Rattus_norvegicus
ENSELUG00000000953	cnot3b	72	88.525	ENSRBIG00000031025	CNOT3	85	88.889	Rhinopithecus_bieti
ENSELUG00000000953	cnot3b	74	88.525	ENSRROG00000003872	CNOT3	93	88.889	Rhinopithecus_roxellana
ENSELUG00000000953	cnot3b	70	88.525	ENSSBOG00000030268	CNOT3	85	88.889	Saimiri_boliviensis_boliviensis
ENSELUG00000000953	cnot3b	100	70.688	ENSSFOG00015019203	-	100	72.766	Scleropages_formosus
ENSELUG00000000953	cnot3b	100	70.620	ENSSFOG00015000248	cnot3	100	70.607	Scleropages_formosus
ENSELUG00000000953	cnot3b	51	63.958	ENSSMAG00000013235	cnot3a	100	67.650	Scophthalmus_maximus
ENSELUG00000000953	cnot3b	100	72.165	ENSSMAG00000016031	cnot3b	100	73.431	Scophthalmus_maximus
ENSELUG00000000953	cnot3b	100	75.131	ENSSDUG00000003428	cnot3b	100	76.354	Seriola_dumerili
ENSELUG00000000953	cnot3b	75	93.162	ENSSDUG00000008181	cnot3a	95	93.162	Seriola_dumerili
ENSELUG00000000953	cnot3b	100	75.052	ENSSLDG00000014376	cnot3b	100	76.250	Seriola_lalandi_dorsalis
ENSELUG00000000953	cnot3b	76	78.649	ENSSPUG00000008510	CNOT3	89	89.542	Sphenodon_punctatus
ENSELUG00000000953	cnot3b	100	74.238	ENSSPAG00000001429	cnot3b	100	75.704	Stegastes_partitus
ENSELUG00000000953	cnot3b	61	89.370	ENSSPAG00000003858	cnot3a	90	89.370	Stegastes_partitus
ENSELUG00000000953	cnot3b	66	88.525	ENSSSCG00000003264	CNOT3	84	88.889	Sus_scrofa
ENSELUG00000000953	cnot3b	57	62.712	ENSTRUG00000015732	cnot3a	100	67.616	Takifugu_rubripes
ENSELUG00000000953	cnot3b	94	67.853	ENSTNIG00000005663	cnot3b	100	67.519	Tetraodon_nigroviridis
ENSELUG00000000953	cnot3b	70	88.852	ENSUAMG00000005234	CNOT3	85	89.216	Ursus_americanus
ENSELUG00000000953	cnot3b	54	91.176	ENSUMAG00000010934	CNOT3	89	91.176	Ursus_maritimus
ENSELUG00000000953	cnot3b	68	88.525	ENSVVUG00000008239	CNOT3	90	88.889	Vulpes_vulpes
ENSELUG00000000953	cnot3b	77	86.971	ENSXETG00000003166	cnot3	92	88.065	Xenopus_tropicalis
ENSELUG00000000953	cnot3b	97	69.197	ENSXCOG00000018976	cnot3b	99	66.157	Xiphophorus_couchianus
ENSELUG00000000953	cnot3b	71	79.110	ENSXCOG00000019460	cnot3a	94	92.735	Xiphophorus_couchianus
ENSELUG00000000953	cnot3b	100	72.516	ENSXMAG00000014176	cnot3b	100	71.579	Xiphophorus_maculatus